RNA–Protein interactions for RNA: ENST00000513997.1

DDX60-205, Transcript of DExD/H-box helicase 60, humanhuman

TSL 3

Gene DDX60, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-205ENST00000513997 RPLP1P05386 114 aaKnown RBP11.17□□□□□ -0.62
DDX60-205ENST00000513997 GPC1P35052 558 aa11.17□□□□□ -0.62
DDX60-205ENST00000513997 EIF4A3P38919 411 aaKnown RBP11.17□□□□□ -0.62
DDX60-205ENST00000513997 CTSOP43234 321 aaPredicted RBP11.17□□□□□ -0.62
DDX60-205ENST00000513997 CDKN1CP49918 316 aaPredicted RBP11.17□□□□□ -0.62
DDX60-205ENST00000513997 RNF144AP50876 292 aaPredicted RBP11.17□□□□□ -0.62
DDX60-205ENST00000513997 EVA1CP58658 441 aa11.17□□□□□ -0.62
DDX60-205ENST00000513997 SCARF1Q14162 830 aa11.17□□□□□ -0.62
DDX60-205ENST00000513997 BRDTQ58F21 947 aaPredicted RBP11.17□□□□□ -0.62
DDX60-205ENST00000513997 CDK2AP1O14519 115 aa11.16□□□□□ -0.62
DDX60-205ENST00000513997 RTN1Q16799 776 aa11.16□□□□□ -0.62
DDX60-205ENST00000513997 FOXD4L6Q3SYB3 417 aaPredicted RBP11.16□□□□□ -0.62
DDX60-205ENST00000513997 ZFYVE27Q5T4F4 411 aa11.16□□□□□ -0.62
DDX60-205ENST00000513997 FOXD4L3Q6VB84 417 aaPredicted RBP11.16□□□□□ -0.62
DDX60-205ENST00000513997 C11orf96Q7Z7L8 435 aa11.16□□□□□ -0.62
DDX60-205ENST00000513997 RELL1Q8IUW5 271 aa11.16□□□□□ -0.62
DDX60-205ENST00000513997 NME8Q8N427 588 aa11.16□□□□□ -0.62
DDX60-205ENST00000513997 CELF2-AS1Q8N7Q2 184 aa11.16□□□□□ -0.62
DDX60-205ENST00000513997 ZFP42Q96MM3 310 aa11.16□□□□□ -0.62
DDX60-205ENST00000513997 GRIP2Q9C0E4 1043 aa11.16□□□□□ -0.62
DDX60-205ENST00000513997 DACH1Q9UI36 760 aa11.16□□□□□ -0.62
DDX60-205ENST00000513997 LEMD3Q9Y2U8 911 aa11.16□□□□□ -0.62
DDX60-205ENST00000513997 HIRAP54198 1017 aaPredicted RBP11.15□□□□□ -0.62
DDX60-205ENST00000513997 RASGRF1Q13972 1273 aa11.15□□□□□ -0.62
DDX60-205ENST00000513997 FAM50AQ14320 339 aaKnown RBP11.15□□□□□ -0.62
DDX60-205ENST00000513997 TNNI3KQ59H18 835 aa11.15□□□□□ -0.62
DDX60-205ENST00000513997 NXPE4Q6UWF7 544 aa11.15□□□□□ -0.62
DDX60-205ENST00000513997 JAMLQ86YT9 394 aa11.15□□□□□ -0.62
DDX60-205ENST00000513997 WDR75Q8IWA0 830 aaKnown RBP11.15□□□□□ -0.62
DDX60-205ENST00000513997 ZNF296Q8WUU4 475 aaPredicted RBP11.15□□□□□ -0.62
DDX60-205ENST00000513997 APBA2Q99767 749 aa11.15□□□□□ -0.62
DDX60-205ENST00000513997 NT5C1AQ9BXI3 368 aa11.15□□□□□ -0.62
DDX60-205ENST00000513997 POLMQ9NP87 494 aaPredicted RBP11.15□□□□□ -0.62
DDX60-205ENST00000513997 ATP13A2Q9NQ11 1180 aa11.15□□□□□ -0.62
DDX60-205ENST00000513997 BSDC1Q9NW68 430 aaPredicted RBP11.15□□□□□ -0.62
DDX60-205ENST00000513997 KLK14Q9P0G3 267 aa11.15□□□□□ -0.62
DDX60-205ENST00000513997 ATP8A1Q9Y2Q0 1164 aa11.15□□□□□ -0.62
DDX60-205ENST00000513997 SMAD7O15105 426 aaKnown RBP11.14□□□□□ -0.63
DDX60-205ENST00000513997 PDPK1O15530 556 aa11.14□□□□□ -0.63
DDX60-205ENST00000513997 SETQ01105 290 aaPredicted RBP11.14□□□□□ -0.63
DDX60-205ENST00000513997 PNISRQ8TF01 805 aaKnown RBP11.14□□□□□ -0.63
DDX60-205ENST00000513997 SRRTQ9BXP5 876 aaKnown RBP11.14□□□□□ -0.63
DDX60-205ENST00000513997 PNMA2Q9UL42 364 aa11.14□□□□□ -0.63
DDX60-205ENST00000513997 LAS1LQ9Y4W2 734 aaKnown RBP11.14□□□□□ -0.63
DDX60-205ENST00000513997 USP3Q9Y6I4 520 aa11.14□□□□□ -0.63
DDX60-205ENST00000513997 MINDY4BA8MYZ0 360 aa11.13□□□□□ -0.63
DDX60-205ENST00000513997 EML1O00423 815 aa11.13□□□□□ -0.63
DDX60-205ENST00000513997 PLIN1O60240 522 aa11.13□□□□□ -0.63
DDX60-205ENST00000513997 GBP2P32456 591 aaPredicted RBP11.13□□□□□ -0.63
DDX60-205ENST00000513997 OS9Q13438 667 aaPredicted RBP11.13□□□□□ -0.63
DDX60-205ENST00000513997 C2orf27AQ580R0 203 aa11.13□□□□□ -0.63
DDX60-205ENST00000513997 PCNX4Q63HM2 1172 aa11.13□□□□□ -0.63
DDX60-205ENST00000513997 ALDH16A1Q8IZ83 802 aa11.13□□□□□ -0.63
DDX60-205ENST00000513997 TMEM74Q96NL1 305 aa11.13□□□□□ -0.63
DDX60-205ENST00000513997 ZSCAN10Q96SZ4 725 aaPredicted RBP11.13□□□□□ -0.63
DDX60-205ENST00000513997 BCO2Q9BYV7 579 aa11.13□□□□□ -0.63
DDX60-205ENST00000513997 GNL3LQ9NVN8 582 aaKnown RBP11.13□□□□□ -0.63
DDX60-205ENST00000513997 SOS2Q07890 1332 aaPredicted RBP11.12□□□□□ -0.63
DDX60-205ENST00000513997 CAND2O75155 1236 aa11.12□□□□□ -0.63
DDX60-205ENST00000513997 NFE2Q16621 373 aaPredicted RBP11.12□□□□□ -0.63
DDX60-205ENST00000513997 DDR2Q16832 855 aa11.12□□□□□ -0.63
DDX60-205ENST00000513997 DALRD3Q5D0E6 543 aaKnown RBP11.12□□□□□ -0.63
DDX60-205ENST00000513997 SLC27A3Q5K4L6 730 aa11.12□□□□□ -0.63
DDX60-205ENST00000513997 TREML1Q86YW5 311 aa11.12□□□□□ -0.63
DDX60-205ENST00000513997 ZNF295-AS1Q8N0V1 137 aa11.12□□□□□ -0.63
DDX60-205ENST00000513997 RNF217Q8TC41 542 aa11.12□□□□□ -0.63
DDX60-205ENST00000513997 SHDQ96IW2 340 aa11.12□□□□□ -0.63
DDX60-205ENST00000513997 KCNQ5Q9NR82 932 aa11.12□□□□□ -0.63
DDX60-205ENST00000513997 FAM13BQ9NYF5 915 aa11.12□□□□□ -0.63
DDX60-205ENST00000513997 FOXD3Q9UJU5 478 aaPredicted RBP11.12□□□□□ -0.63
DDX60-205ENST00000513997 SERTM1A2A2V5 107 aa11.11□□□□□ -0.63
DDX60-205ENST00000513997 TTLL8A6PVC2 850 aa11.11□□□□□ -0.63
DDX60-205ENST00000513997 KCNQ2O43526 872 aa11.11□□□□□ -0.63
DDX60-205ENST00000513997 TSPAN6O43657 245 aa11.11□□□□□ -0.63
DDX60-205ENST00000513997 TNFRSF21O75509 655 aa11.11□□□□□ -0.63
DDX60-205ENST00000513997 TCEA2Q15560 299 aa11.11□□□□□ -0.63
DDX60-205ENST00000513997 SLC39A13Q96H72 371 aa11.11□□□□□ -0.63
DDX60-205ENST00000513997 F6X3S4 739 aa11.1□□□□□ -0.63
DDX60-205ENST00000513997 POU3F3P20264 500 aaPredicted RBP11.1□□□□□ -0.63
DDX60-205ENST00000513997 CNGA1P29973 690 aa11.1□□□□□ -0.63
DDX60-205ENST00000513997 HDAC1Q13547 482 aaPredicted RBP11.1□□□□□ -0.63
DDX60-205ENST00000513997 SH3PXD2AQ5TCZ1 1133 aa11.1□□□□□ -0.63
DDX60-205ENST00000513997 Q6ZNB5 142 aa11.1□□□□□ -0.63
DDX60-205ENST00000513997 THAP3Q8WTV1 239 aaPredicted RBP11.1□□□□□ -0.63
DDX60-205ENST00000513997 IL17RAQ96F46 866 aa11.1□□□□□ -0.63
DDX60-205ENST00000513997 PLAAQ9Y263 795 aa11.1□□□□□ -0.63
DDX60-205ENST00000513997 LCE2BO14633 110 aa11.09□□□□□ -0.63
DDX60-205ENST00000513997 EPHB1P54762 984 aa11.09□□□□□ -0.63
DDX60-205ENST00000513997 SAFB2Q14151 953 aaKnown RBP eCLIP11.09□□□□□ -0.63
DDX60-205ENST00000513997 TEAD4Q15561 434 aa11.09□□□□□ -0.63
DDX60-205ENST00000513997 TMEM214Q6NUQ4 689 aaKnown RBP11.09□□□□□ -0.63
DDX60-205ENST00000513997 SYNPOQ8N3V7 929 aa11.09□□□□□ -0.63
DDX60-205ENST00000513997 NBPF15Q8N660 670 aa11.09□□□□□ -0.63
DDX60-205ENST00000513997 JMYQ8N9B5 988 aa11.09□□□□□ -0.63
DDX60-205ENST00000513997 SNX29Q8TEQ0 813 aa11.09□□□□□ -0.63
DDX60-205ENST00000513997 FAM126AQ9BYI3 521 aaPredicted RBP11.09□□□□□ -0.63
DDX60-205ENST00000513997 ZFYVE28Q9HCC9 887 aa11.09□□□□□ -0.63
DDX60-205ENST00000513997 NPHS2Q9NP85 383 aa11.09□□□□□ -0.63
DDX60-205ENST00000513997 ST7Q9NRC1 585 aa11.09□□□□□ -0.63
DDX60-205ENST00000513997 SPATA31C2B4DYI2 1134 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms