RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 SMIM5Q71RC9 77 aa17.9■□□□□ 0.46
VCAN-211ENST00000513984 DSCC1Q9BVC3 393 aa17.9■□□□□ 0.46
VCAN-211ENST00000513984 SRP68Q9UHB9 627 aaKnown RBP17.9■□□□□ 0.46
VCAN-211ENST00000513984 LIMCH1Q9UPQ0 1083 aa17.9■□□□□ 0.46
VCAN-211ENST00000513984 MAST3O60307 1309 aa17.9■□□□□ 0.46
VCAN-211ENST00000513984 CPA1P15085 419 aa17.89■□□□□ 0.45
VCAN-211ENST00000513984 CDC5LQ99459 802 aaKnown RBP17.89■□□□□ 0.45
VCAN-211ENST00000513984 NYXQ9GZU5 481 aa17.89■□□□□ 0.45
VCAN-211ENST00000513984 PDRG1Q9NUG6 133 aa17.89■□□□□ 0.45
VCAN-211ENST00000513984 UQCRFS1P1P0C7P4 283 aa17.88■□□□□ 0.45
VCAN-211ENST00000513984 SLC5A1P13866 664 aa17.88■□□□□ 0.45
VCAN-211ENST00000513984 KRT32Q14532 448 aa17.88■□□□□ 0.45
VCAN-211ENST00000513984 CCDC102BQ68D86 513 aa17.88■□□□□ 0.45
VCAN-211ENST00000513984 AMIGO3Q86WK7 504 aa17.88■□□□□ 0.45
VCAN-211ENST00000513984 SLFNL1Q499Z3 407 aa17.88■□□□□ 0.45
VCAN-211ENST00000513984 PI16Q6UXB8 463 aa17.88■□□□□ 0.45
VCAN-211ENST00000513984 HELBQ8NG08 1087 aaPredicted RBP17.88■□□□□ 0.45
VCAN-211ENST00000513984 ARHGEF1Q92888 912 aaKnown RBP17.88■□□□□ 0.45
VCAN-211ENST00000513984 ALDH8A1Q9H2A2 487 aaPredicted RBP17.88■□□□□ 0.45
VCAN-211ENST00000513984 TAF6LQ9Y6J9 622 aa17.88■□□□□ 0.45
VCAN-211ENST00000513984 DEKP35659 375 aaKnown RBP17.87■□□□□ 0.45
VCAN-211ENST00000513984 PHKA1P46020 1223 aa17.87■□□□□ 0.45
VCAN-211ENST00000513984 TTF1Q15361 905 aaPredicted RBP17.87■□□□□ 0.45
VCAN-211ENST00000513984 BICDL1Q6ZP65 573 aa17.87■□□□□ 0.45
VCAN-211ENST00000513984 C3orf67Q6ZVT6 689 aa17.87■□□□□ 0.45
VCAN-211ENST00000513984 SETDB2Q96T68 719 aa17.87■□□□□ 0.45
VCAN-211ENST00000513984 PKP1Q13835 747 aa17.86■□□□□ 0.45
VCAN-211ENST00000513984 BLOC1S2Q6QNY1 142 aa17.86■□□□□ 0.45
VCAN-211ENST00000513984 FAM196AQ6ZSG2 479 aa17.86■□□□□ 0.45
VCAN-211ENST00000513984 OSBP2Q969R2 916 aa17.86■□□□□ 0.45
VCAN-211ENST00000513984 TNRC6CQ9HCJ0 1690 aaKnown RBP17.86■□□□□ 0.45
VCAN-211ENST00000513984 M0R2C6 588 aa17.86■□□□□ 0.45
VCAN-211ENST00000513984 CYP21A2P08686 494 aa17.86■□□□□ 0.45
VCAN-211ENST00000513984 RPS6KB1P23443 525 aa17.86■□□□□ 0.45
VCAN-211ENST00000513984 APPBP2Q92624 585 aa17.86■□□□□ 0.45
VCAN-211ENST00000513984 ZSCAN31Q96LW9 406 aaPredicted RBP17.86■□□□□ 0.45
VCAN-211ENST00000513984 SH2B1Q9NRF2 756 aaPredicted RBP17.86■□□□□ 0.45
VCAN-211ENST00000513984 LRRC4BQ9NT99 713 aa17.86■□□□□ 0.45
VCAN-211ENST00000513984 HSPD1P10809 573 aaKnown RBP17.85■□□□□ 0.45
VCAN-211ENST00000513984 CHRNDQ07001 517 aa17.85■□□□□ 0.45
VCAN-211ENST00000513984 GSE1Q14687 1217 aa17.85■□□□□ 0.45
VCAN-211ENST00000513984 KRT27Q7Z3Y8 459 aa17.85■□□□□ 0.45
VCAN-211ENST00000513984 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.85■□□□□ 0.45
VCAN-211ENST00000513984 ZDHHC9Q9Y397 364 aa17.85■□□□□ 0.45
VCAN-211ENST00000513984 MYH13Q9UKX3 1938 aa17.85■□□□□ 0.45
VCAN-211ENST00000513984 ADRA2BP18089 450 aa17.84■□□□□ 0.45
VCAN-211ENST00000513984 PTMSP20962 102 aa17.84■□□□□ 0.45
VCAN-211ENST00000513984 GTF2E1P29083 439 aaPredicted RBP17.84■□□□□ 0.45
VCAN-211ENST00000513984 ZSCAN25Q6NSZ9 544 aa17.84■□□□□ 0.45
VCAN-211ENST00000513984 NBPF5PQ86XG9 351 aaPredicted RBP17.84■□□□□ 0.45
VCAN-211ENST00000513984 ANKRD18AQ8IVF6 992 aa17.84■□□□□ 0.45
VCAN-211ENST00000513984 BAG4O95429 457 aaKnown RBP17.84■□□□□ 0.45
VCAN-211ENST00000513984 COL9A3Q14050 684 aaPredicted RBP17.84■□□□□ 0.45
VCAN-211ENST00000513984 ANKRD1Q15327 319 aa17.84■□□□□ 0.45
VCAN-211ENST00000513984 TRAPPC3LQ5T215 181 aa17.84■□□□□ 0.45
VCAN-211ENST00000513984 BSDC1Q9NW68 430 aaPredicted RBP17.84■□□□□ 0.45
VCAN-211ENST00000513984 LARGE1O95461 756 aa17.83■□□□□ 0.44
VCAN-211ENST00000513984 RFC4P35249 363 aa17.83■□□□□ 0.44
VCAN-211ENST00000513984 ADD2P35612 726 aa17.83■□□□□ 0.44
VCAN-211ENST00000513984 SLC27A3Q5K4L6 730 aa17.83■□□□□ 0.44
VCAN-211ENST00000513984 TPTE2Q6XPS3 522 aa17.83■□□□□ 0.44
VCAN-211ENST00000513984 PIH1D3Q9NQM4 214 aaKnown RBP17.83■□□□□ 0.44
VCAN-211ENST00000513984 BRD1O95696 1058 aa17.82■□□□□ 0.44
VCAN-211ENST00000513984 WASHC4Q2M389 1173 aa17.82■□□□□ 0.44
VCAN-211ENST00000513984 NEK1Q96PY6 1258 aa17.82■□□□□ 0.44
VCAN-211ENST00000513984 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.82■□□□□ 0.44
VCAN-211ENST00000513984 CARMIL3Q8ND23 1372 aa17.82■□□□□ 0.44
VCAN-211ENST00000513984 SNAP23O00161 211 aa17.82■□□□□ 0.44
VCAN-211ENST00000513984 UBE3CQ15386 1083 aa17.82■□□□□ 0.44
VCAN-211ENST00000513984 SPATA5Q8NB90 893 aa17.82■□□□□ 0.44
VCAN-211ENST00000513984 NLRP3Q96P20 1036 aa17.82■□□□□ 0.44
VCAN-211ENST00000513984 LARP6Q9BRS8 491 aaKnown RBP17.82■□□□□ 0.44
VCAN-211ENST00000513984 EP400Q96L91 3159 aa17.81■□□□□ 0.44
VCAN-211ENST00000513984 FOXP2O15409 715 aa17.81■□□□□ 0.44
VCAN-211ENST00000513984 TRAK2O60296 914 aa17.81■□□□□ 0.44
VCAN-211ENST00000513984 PHF14O94880 888 aa17.81■□□□□ 0.44
VCAN-211ENST00000513984 RASGRF1Q13972 1273 aa17.81■□□□□ 0.44
VCAN-211ENST00000513984 TOB2Q14106 344 aaPredicted RBP17.81■□□□□ 0.44
VCAN-211ENST00000513984 PUS7LQ9H0K6 701 aaKnown RBP17.81■□□□□ 0.44
VCAN-211ENST00000513984 CHD4Q14839 1912 aa17.81■□□□□ 0.44
VCAN-211ENST00000513984 TCHHQ07283 1943 aa17.8■□□□□ 0.44
VCAN-211ENST00000513984 GOLGA6L22H0YM25 854 aa17.8■□□□□ 0.44
VCAN-211ENST00000513984 HMGB1P09429 215 aaKnown RBP17.8■□□□□ 0.44
VCAN-211ENST00000513984 UBE4AQ14139 1066 aa17.8■□□□□ 0.44
VCAN-211ENST00000513984 ME3Q16798 604 aa17.8■□□□□ 0.44
VCAN-211ENST00000513984 STOX1Q6ZVD7 989 aa17.8■□□□□ 0.44
VCAN-211ENST00000513984 TPCN1Q9ULQ1 816 aa17.8■□□□□ 0.44
VCAN-211ENST00000513984 ZNF804BA4D1E1 1349 aa17.79■□□□□ 0.44
VCAN-211ENST00000513984 ST3GAL1Q11201 340 aa17.79■□□□□ 0.44
VCAN-211ENST00000513984 SLC9C2Q5TAH2 1124 aa17.79■□□□□ 0.44
VCAN-211ENST00000513984 CELF1Q92879 486 aaKnown RBP17.79■□□□□ 0.44
VCAN-211ENST00000513984 GPAA1O43292 621 aa17.79■□□□□ 0.44
VCAN-211ENST00000513984 IDH1O75874 414 aaKnown RBP17.79■□□□□ 0.44
VCAN-211ENST00000513984 CCDC83Q8IWF9 413 aa17.79■□□□□ 0.44
VCAN-211ENST00000513984 CTNNA3Q9UI47 895 aa17.79■□□□□ 0.44
VCAN-211ENST00000513984 MINPP1Q9UNW1 487 aa17.79■□□□□ 0.44
VCAN-211ENST00000513984 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.78■□□□□ 0.44
VCAN-211ENST00000513984 TCRBV5S4A2TA0A5A2 114 aa17.78■□□□□ 0.44
VCAN-211ENST00000513984 TRIM37O94972 964 aa17.78■□□□□ 0.44
VCAN-211ENST00000513984 PDE6AP16499 860 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms