RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 PCDHB9Q9Y5E1 797 aa7.98□□□□□ -1.13
GYPB-215ENST00000513677 C4AP0C0L4 1744 aa7.98□□□□□ -1.13
GYPB-215ENST00000513677 WDR90Q96KV7 1748 aa7.98□□□□□ -1.13
GYPB-215ENST00000513677 KIF13BQ9NQT8 1826 aa7.97□□□□□ -1.13
GYPB-215ENST00000513677 RAD21O60216 631 aa7.97□□□□□ -1.13
GYPB-215ENST00000513677 PTCD1O75127 700 aaKnown RBP7.97□□□□□ -1.13
GYPB-215ENST00000513677 GRM5P41594 1212 aa7.97□□□□□ -1.13
GYPB-215ENST00000513677 TGFB2P61812 414 aa7.97□□□□□ -1.13
GYPB-215ENST00000513677 CDCA8Q53HL2 280 aa7.97□□□□□ -1.13
GYPB-215ENST00000513677 NLGN1Q8N2Q7 840 aa7.97□□□□□ -1.13
GYPB-215ENST00000513677 RNF181Q9P0P0 153 aa7.97□□□□□ -1.13
GYPB-215ENST00000513677 CDV3Q9UKY7 258 aaKnown RBP7.97□□□□□ -1.13
GYPB-215ENST00000513677 KIF24Q5T7B8 1368 aa7.97□□□□□ -1.13
GYPB-215ENST00000513677 C10orf71Q711Q0 1435 aa7.96□□□□□ -1.13
GYPB-215ENST00000513677 LCE2BO14633 110 aa7.96□□□□□ -1.14
GYPB-215ENST00000513677 AVPP01185 164 aa7.96□□□□□ -1.14
GYPB-215ENST00000513677 GYS1P13807 737 aa7.96□□□□□ -1.14
GYPB-215ENST00000513677 CABP4P57796 275 aa7.96□□□□□ -1.14
GYPB-215ENST00000513677 VAC14Q08AM6 782 aa7.96□□□□□ -1.14
GYPB-215ENST00000513677 RRAGCQ9HB90 399 aa7.96□□□□□ -1.14
GYPB-215ENST00000513677 SRP68Q9UHB9 627 aaKnown RBP7.96□□□□□ -1.14
GYPB-215ENST00000513677 KCPQ6ZWJ8 1503 aa7.96□□□□□ -1.14
GYPB-215ENST00000513677 ANKRD26Q9UPS8 1709 aa7.95□□□□□ -1.14
GYPB-215ENST00000513677 NR3C2P08235 984 aa7.95□□□□□ -1.14
GYPB-215ENST00000513677 CHRNA5P30532 468 aa7.95□□□□□ -1.14
GYPB-215ENST00000513677 NR5A1Q13285 461 aa7.95□□□□□ -1.14
GYPB-215ENST00000513677 EIF4A2Q14240 407 aaKnown RBP7.95□□□□□ -1.14
GYPB-215ENST00000513677 ZNF530Q6P9A1 599 aaPredicted RBP7.95□□□□□ -1.14
GYPB-215ENST00000513677 DNAJC5GQ8N7S2 189 aa7.95□□□□□ -1.14
GYPB-215ENST00000513677 CLUAP1Q96AJ1 413 aa7.95□□□□□ -1.14
GYPB-215ENST00000513677 SLC4A9Q96Q91 983 aa7.95□□□□□ -1.14
GYPB-215ENST00000513677 KCTD15Q96SI1 283 aaPredicted RBP7.95□□□□□ -1.14
GYPB-215ENST00000513677 POLKQ9UBT6 870 aa7.95□□□□□ -1.14
GYPB-215ENST00000513677 ZNF330Q9Y3S2 320 aaPredicted RBP7.95□□□□□ -1.14
GYPB-215ENST00000513677 GTF3C3Q9Y5Q9 886 aa7.95□□□□□ -1.14
GYPB-215ENST00000513677 WASHC2AQ641Q2 1341 aa7.95□□□□□ -1.14
GYPB-215ENST00000513677 COL5A3P25940 1745 aaPredicted RBP7.95□□□□□ -1.14
GYPB-215ENST00000513677 NCAPD2Q15021 1401 aa7.95□□□□□ -1.14
GYPB-215ENST00000513677 BRCA1P38398 1863 aaKnown RBP7.94□□□□□ -1.14
GYPB-215ENST00000513677 ST8SIA5O15466 376 aa7.94□□□□□ -1.14
GYPB-215ENST00000513677 RPS6KA4O75676 772 aa7.94□□□□□ -1.14
GYPB-215ENST00000513677 NBPF20Q3BBV1 942 aa7.94□□□□□ -1.14
GYPB-215ENST00000513677 DALRD3Q5D0E6 543 aaKnown RBP7.94□□□□□ -1.14
GYPB-215ENST00000513677 COL13A1Q5TAT6 717 aaPredicted RBP7.94□□□□□ -1.14
GYPB-215ENST00000513677 TRAF7Q6Q0C0 670 aa7.94□□□□□ -1.14
GYPB-215ENST00000513677 PIM2Q9P1W9 311 aa7.94□□□□□ -1.14
GYPB-215ENST00000513677 KDM2BQ8NHM5 1336 aa7.94□□□□□ -1.14
GYPB-215ENST00000513677 KDRP35968 1356 aa7.94□□□□□ -1.14
GYPB-215ENST00000513677 ARFGEF1Q9Y6D6 1849 aa7.94□□□□□ -1.14
GYPB-215ENST00000513677 KCNA3P22001 575 aa7.93□□□□□ -1.14
GYPB-215ENST00000513677 CRKLP46109 303 aaKnown RBP7.93□□□□□ -1.14
GYPB-215ENST00000513677 MTHFSP49914 203 aa7.93□□□□□ -1.14
GYPB-215ENST00000513677 RAB15P59190 212 aa7.93□□□□□ -1.14
GYPB-215ENST00000513677 RASSF7Q02833 373 aa7.93□□□□□ -1.14
GYPB-215ENST00000513677 WASHC4Q2M389 1173 aa7.93□□□□□ -1.14
GYPB-215ENST00000513677 PLEKHO1Q53GL0 409 aaPredicted RBP7.93□□□□□ -1.14
GYPB-215ENST00000513677 INTS6LQ5JSJ4 861 aaKnown RBP7.93□□□□□ -1.14
GYPB-215ENST00000513677 C1orf141Q5JVX7 400 aa7.93□□□□□ -1.14
GYPB-215ENST00000513677 CCDC116Q8IYX3 515 aa7.93□□□□□ -1.14
GYPB-215ENST00000513677 KLRG1Q96E93 195 aa7.93□□□□□ -1.14
GYPB-215ENST00000513677 CNTNAP4Q9C0A0 1308 aa7.93□□□□□ -1.14
GYPB-215ENST00000513677 PLEKHG2Q9H7P9 1386 aa7.93□□□□□ -1.14
GYPB-215ENST00000513677 MYH14Q7Z406 1995 aaKnown RBP7.93□□□□□ -1.14
GYPB-215ENST00000513677 ERVV-2B6SEH9 535 aa7.92□□□□□ -1.14
GYPB-215ENST00000513677 AXIN1O15169 862 aa7.92□□□□□ -1.14
GYPB-215ENST00000513677 HSP90AB1P08238 724 aaKnown RBP7.92□□□□□ -1.14
GYPB-215ENST00000513677 WDR4P57081 412 aaKnown RBP7.92□□□□□ -1.14
GYPB-215ENST00000513677 DDR1Q08345 913 aa7.92□□□□□ -1.14
GYPB-215ENST00000513677 CTC1Q2NKJ3 1217 aa7.92□□□□□ -1.14
GYPB-215ENST00000513677 WWC1Q8IX03 1113 aa7.92□□□□□ -1.14
GYPB-215ENST00000513677 TNS4Q8IZW8 715 aa7.92□□□□□ -1.14
GYPB-215ENST00000513677 DCAF5Q96JK2 942 aa7.92□□□□□ -1.14
GYPB-215ENST00000513677 AAASQ9NRG9 546 aa7.92□□□□□ -1.14
GYPB-215ENST00000513677 KDM6AO15550 1401 aaPredicted RBP7.92□□□□□ -1.14
GYPB-215ENST00000513677 TNRC6CQ9HCJ0 1690 aaKnown RBP7.92□□□□□ -1.14
GYPB-215ENST00000513677 TIMP2P16035 220 aa7.91□□□□□ -1.14
GYPB-215ENST00000513677 SMCPP49901 116 aaPredicted RBP7.91□□□□□ -1.14
GYPB-215ENST00000513677 EIF4G2P78344 907 aaKnown RBP eCLIP7.91□□□□□ -1.14
GYPB-215ENST00000513677 FSTL1Q12841 308 aa7.91□□□□□ -1.14
GYPB-215ENST00000513677 USPL1Q5W0Q7 1092 aa7.91□□□□□ -1.14
GYPB-215ENST00000513677 AEBP1Q8IUX7 1158 aa7.91□□□□□ -1.14
GYPB-215ENST00000513677 CRIPAKQ8N1N5 446 aa7.91□□□□□ -1.14
GYPB-215ENST00000513677 NFATC2IPQ8NCF5 419 aa7.91□□□□□ -1.14
GYPB-215ENST00000513677 USP42Q9H9J4 1324 aaKnown RBP7.91□□□□□ -1.14
GYPB-215ENST00000513677 TJP1Q07157 1748 aa7.91□□□□□ -1.14
GYPB-215ENST00000513677 SBF1O95248 1867 aa7.9□□□□□ -1.14
GYPB-215ENST00000513677 ZNF831Q5JPB2 1677 aa7.9□□□□□ -1.14
GYPB-215ENST00000513677 ESPNB1AK53 854 aa7.9□□□□□ -1.14
GYPB-215ENST00000513677 CAPN5O15484 640 aaPredicted RBP7.9□□□□□ -1.14
GYPB-215ENST00000513677 ZIC2O95409 532 aaPredicted RBP7.9□□□□□ -1.14
GYPB-215ENST00000513677 MCCD1P59942 119 aaPredicted RBP7.9□□□□□ -1.14
GYPB-215ENST00000513677 PPP1R26Q5T8A7 1209 aaPredicted RBP7.9□□□□□ -1.14
GYPB-215ENST00000513677 SMC1BQ8NDV3 1235 aa7.9□□□□□ -1.14
GYPB-215ENST00000513677 ZNF592Q92610 1267 aa7.9□□□□□ -1.14
GYPB-215ENST00000513677 ITPKCQ96DU7 683 aa7.9□□□□□ -1.14
GYPB-215ENST00000513677 ZFAND3Q9H8U3 227 aa7.9□□□□□ -1.14
GYPB-215ENST00000513677 POLRMTO00411 1230 aaKnown RBP7.89□□□□□ -1.15
GYPB-215ENST00000513677 HSPA1AP0DMV8 641 aaKnown RBP7.89□□□□□ -1.15
GYPB-215ENST00000513677 HSPA1BP0DMV9 641 aaKnown RBP7.89□□□□□ -1.15
GYPB-215ENST00000513677 AMOTQ4VCS5 1084 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms