RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 DZANK1Q9NVP4 752 aa11.03□□□□□ -0.64
TRAPPC11-210ENST00000513600 DCTN4Q9UJW0 460 aa11.03□□□□□ -0.64
TRAPPC11-210ENST00000513600 PPME1Q9Y570 386 aa11.03□□□□□ -0.64
TRAPPC11-210ENST00000513600 PTPRAP18433 802 aa11.02□□□□□ -0.65
TRAPPC11-210ENST00000513600 CDC27P30260 824 aa11.02□□□□□ -0.65
TRAPPC11-210ENST00000513600 MAP4K3Q8IVH8 894 aa11.02□□□□□ -0.65
TRAPPC11-210ENST00000513600 POP1Q99575 1024 aaKnown RBP11.02□□□□□ -0.65
TRAPPC11-210ENST00000513600 SPOCK3Q9BQ16 436 aa11.02□□□□□ -0.65
TRAPPC11-210ENST00000513600 LACRTQ9GZZ8 138 aa11.02□□□□□ -0.65
TRAPPC11-210ENST00000513600 NFKBIEO00221 500 aa11.01□□□□□ -0.65
TRAPPC11-210ENST00000513600 DCAF11Q8TEB1 546 aa11.01□□□□□ -0.65
TRAPPC11-210ENST00000513600 OSMRQ99650 979 aa11.01□□□□□ -0.65
TRAPPC11-210ENST00000513600 ADAM19Q9H013 955 aa11.01□□□□□ -0.65
TRAPPC11-210ENST00000513600 PDE2AO00408 941 aaPredicted RBP11□□□□□ -0.65
TRAPPC11-210ENST00000513600 ACPPP15309 386 aa11□□□□□ -0.65
TRAPPC11-210ENST00000513600 TMEM102Q8N9M5 508 aaPredicted RBP11□□□□□ -0.65
TRAPPC11-210ENST00000513600 LENG1Q96BZ8 264 aaPredicted RBP11□□□□□ -0.65
TRAPPC11-210ENST00000513600 DEAF1O75398 565 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC11-210ENST00000513600 IGHA2P01877 340 aa10.99□□□□□ -0.65
TRAPPC11-210ENST00000513600 PROCP04070 461 aa10.99□□□□□ -0.65
TRAPPC11-210ENST00000513600 NRG1Q02297 640 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC11-210ENST00000513600 GALNT12Q8IXK2 581 aa10.99□□□□□ -0.65
TRAPPC11-210ENST00000513600 ALKBH8Q96BT7 664 aaKnown RBP10.99□□□□□ -0.65
TRAPPC11-210ENST00000513600 ZKSCAN3Q9BRR0 538 aa10.99□□□□□ -0.65
TRAPPC11-210ENST00000513600 GPR182O15218 404 aa10.98□□□□□ -0.65
TRAPPC11-210ENST00000513600 CPNE3O75131 537 aaKnown RBP10.98□□□□□ -0.65
TRAPPC11-210ENST00000513600 SELPP16109 830 aa10.98□□□□□ -0.65
TRAPPC11-210ENST00000513600 MAPK1P28482 360 aa10.98□□□□□ -0.65
TRAPPC11-210ENST00000513600 AEBP1Q8IUX7 1158 aa10.98□□□□□ -0.65
TRAPPC11-210ENST00000513600 NIF3L1Q9GZT8 377 aa10.98□□□□□ -0.65
TRAPPC11-210ENST00000513600 DNAJC25Q9H1X3 360 aa10.98□□□□□ -0.65
TRAPPC11-210ENST00000513600 LINC01387J3KSC0 135 aa10.97□□□□□ -0.65
TRAPPC11-210ENST00000513600 TRPA1O75762 1119 aa10.97□□□□□ -0.65
TRAPPC11-210ENST00000513600 POLR3DP05423 398 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC11-210ENST00000513600 ORC1Q13415 861 aa10.97□□□□□ -0.65
TRAPPC11-210ENST00000513600 SETDB1Q15047 1291 aa10.97□□□□□ -0.65
TRAPPC11-210ENST00000513600 FAM117BQ6P1L5 589 aa10.97□□□□□ -0.65
TRAPPC11-210ENST00000513600 IGF2-ASQ6U949 168 aa10.97□□□□□ -0.65
TRAPPC11-210ENST00000513600 TMC7Q7Z402 723 aa10.97□□□□□ -0.65
TRAPPC11-210ENST00000513600 NXPE3Q969Y0 559 aa10.97□□□□□ -0.65
TRAPPC11-210ENST00000513600 DLL1O00548 723 aa10.96□□□□□ -0.65
TRAPPC11-210ENST00000513600 GATA4P43694 442 aa10.96□□□□□ -0.65
TRAPPC11-210ENST00000513600 CABP4P57796 275 aa10.96□□□□□ -0.65
TRAPPC11-210ENST00000513600 PEAR1Q5VY43 1037 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC11-210ENST00000513600 SHISA2Q6UWI4 295 aa10.96□□□□□ -0.65
TRAPPC11-210ENST00000513600 ADAMTSL4Q6UY14 1074 aa10.96□□□□□ -0.65
TRAPPC11-210ENST00000513600 HHIPQ96QV1 700 aa10.96□□□□□ -0.65
TRAPPC11-210ENST00000513600 SH2B1Q9NRF2 756 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC11-210ENST00000513600 ADGRE1Q14246 886 aa10.95□□□□□ -0.66
TRAPPC11-210ENST00000513600 LATS2Q9NRM7 1088 aa10.95□□□□□ -0.66
TRAPPC11-210ENST00000513600 USP21Q9UK80 565 aa10.95□□□□□ -0.66
TRAPPC11-210ENST00000513600 EIF1AYO14602 144 aaKnown RBP10.94□□□□□ -0.66
TRAPPC11-210ENST00000513600 EPHA1P21709 976 aa10.94□□□□□ -0.66
TRAPPC11-210ENST00000513600 USPL1Q5W0Q7 1092 aa10.94□□□□□ -0.66
TRAPPC11-210ENST00000513600 BSNDQ8WZ55 320 aa10.94□□□□□ -0.66
TRAPPC11-210ENST00000513600 BHLHE41Q9C0J9 482 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC11-210ENST00000513600 H3BRJ5 948 aa10.93□□□□□ -0.66
TRAPPC11-210ENST00000513600 WNT8BQ93098 351 aa10.93□□□□□ -0.66
TRAPPC11-210ENST00000513600 CSRNP1Q96S65 589 aa10.93□□□□□ -0.66
TRAPPC11-210ENST00000513600 SOX13Q9UN79 622 aa10.93□□□□□ -0.66
TRAPPC11-210ENST00000513600 A0A1W2PP55 124 aa10.92□□□□□ -0.66
TRAPPC11-210ENST00000513600 CDC25BP30305 580 aa10.92□□□□□ -0.66
TRAPPC11-210ENST00000513600 MBTPS1Q14703 1052 aa10.92□□□□□ -0.66
TRAPPC11-210ENST00000513600 KIAA0319Q5VV43 1072 aa10.92□□□□□ -0.66
TRAPPC11-210ENST00000513600 TXNDC11Q6PKC3 985 aa10.92□□□□□ -0.66
TRAPPC11-210ENST00000513600 ZSCAN29Q8IWY8 852 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC11-210ENST00000513600 KLHL23Q8NBE8 558 aa10.92□□□□□ -0.66
TRAPPC11-210ENST00000513600 FSCN2O14926 492 aa10.91□□□□□ -0.66
TRAPPC11-210ENST00000513600 PIP4K2BP78356 416 aa10.91□□□□□ -0.66
TRAPPC11-210ENST00000513600 PLCB3Q01970 1234 aa10.91□□□□□ -0.66
TRAPPC11-210ENST00000513600 TXNRD3Q86VQ6 643 aa10.91□□□□□ -0.66
TRAPPC11-210ENST00000513600 CCDC74AQ96AQ1 378 aa10.91□□□□□ -0.66
TRAPPC11-210ENST00000513600 MRPL18Q9H0U6 180 aaKnown RBP10.91□□□□□ -0.66
TRAPPC11-210ENST00000513600 TREHO43280 583 aa10.9□□□□□ -0.66
TRAPPC11-210ENST00000513600 DSC3Q14574 896 aa10.9□□□□□ -0.66
TRAPPC11-210ENST00000513600 CCNJLQ8IV13 435 aa10.9□□□□□ -0.66
TRAPPC11-210ENST00000513600 GALNT11Q8NCW6 608 aa10.9□□□□□ -0.66
TRAPPC11-210ENST00000513600 ASAP3Q8TDY4 903 aa10.9□□□□□ -0.66
TRAPPC11-210ENST00000513600 LIN7BQ9HAP6 207 aa10.9□□□□□ -0.66
TRAPPC11-210ENST00000513600 SEC31BQ9NQW1 1179 aa10.9□□□□□ -0.66
TRAPPC11-210ENST00000513600 CD68P34810 354 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC11-210ENST00000513600 ASB16Q96NS5 453 aa10.89□□□□□ -0.67
TRAPPC11-210ENST00000513600 NPHS2Q9NP85 383 aa10.89□□□□□ -0.67
TRAPPC11-210ENST00000513600 OSGEPQ9NPF4 335 aa10.89□□□□□ -0.67
TRAPPC11-210ENST00000513600 ARL4DP49703 201 aa10.88□□□□□ -0.67
TRAPPC11-210ENST00000513600 VN1R5Q7Z5H4 357 aa10.88□□□□□ -0.67
TRAPPC11-210ENST00000513600 TMEM130Q8N3G9 435 aa10.88□□□□□ -0.67
TRAPPC11-210ENST00000513600 CARD10Q9BWT7 1032 aa10.88□□□□□ -0.67
TRAPPC11-210ENST00000513600 EHD4Q9H223 541 aa10.88□□□□□ -0.67
TRAPPC11-210ENST00000513600 IKBKEQ14164 716 aa10.87□□□□□ -0.67
TRAPPC11-210ENST00000513600 SUZ12Q15022 739 aaKnown RBP10.87□□□□□ -0.67
TRAPPC11-210ENST00000513600 SND1Q7KZF4 910 aaKnown RBP eCLIP10.87□□□□□ -0.67
TRAPPC11-210ENST00000513600 WFDC12Q8WWY7 111 aa10.87□□□□□ -0.67
TRAPPC11-210ENST00000513600 TCF12Q99081 682 aa10.87□□□□□ -0.67
TRAPPC11-210ENST00000513600 TM4SF5O14894 197 aa10.86□□□□□ -0.67
TRAPPC11-210ENST00000513600 A0A096LPE4 126 aa10.85□□□□□ -0.67
TRAPPC11-210ENST00000513600 A0A1W2PPZ6 126 aa10.85□□□□□ -0.67
TRAPPC11-210ENST00000513600 METTL12A8MUP2 240 aa10.85□□□□□ -0.67
TRAPPC11-210ENST00000513600 GADD45BO75293 160 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC11-210ENST00000513600 DOC2BQ14184 412 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms