RNA–Protein interactions for RNA: ENST00000513448.5

PROM1-215, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-215ENST00000513448 OFD1O75665 1012 aa10.99□□□□□ -0.65
PROM1-215ENST00000513448 SCRN1Q12765 414 aa10.99□□□□□ -0.65
PROM1-215ENST00000513448 STK3Q13188 491 aa10.99□□□□□ -0.65
PROM1-215ENST00000513448 IMMTQ16891 758 aaKnown RBP10.99□□□□□ -0.65
PROM1-215ENST00000513448 IFFO2Q5TF58 517 aa10.99□□□□□ -0.65
PROM1-215ENST00000513448 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.99□□□□□ -0.65
PROM1-215ENST00000513448 STOX1Q6ZVD7 989 aa10.99□□□□□ -0.65
PROM1-215ENST00000513448 TTLL11Q8NHH1 800 aa10.99□□□□□ -0.65
PROM1-215ENST00000513448 APPBP2Q92624 585 aa10.99□□□□□ -0.65
PROM1-215ENST00000513448 CAVIN2O95810 425 aa10.98□□□□□ -0.65
PROM1-215ENST00000513448 FKBP4Q02790 459 aaKnown RBP eCLIP10.98□□□□□ -0.65
PROM1-215ENST00000513448 LDHAL6AQ6ZMR3 332 aa10.98□□□□□ -0.65
PROM1-215ENST00000513448 LEO1Q8WVC0 666 aaPredicted RBP10.98□□□□□ -0.65
PROM1-215ENST00000513448 NUP62CLQ9H1M0 184 aa10.98□□□□□ -0.65
PROM1-215ENST00000513448 DHX16O60231 1041 aaKnown RBP10.97□□□□□ -0.65
PROM1-215ENST00000513448 PDE8AO60658 829 aa10.97□□□□□ -0.65
PROM1-215ENST00000513448 CTSWP56202 376 aa10.97□□□□□ -0.65
PROM1-215ENST00000513448 RESTQ13127 1097 aa10.97□□□□□ -0.65
PROM1-215ENST00000513448 MAP3K11Q16584 847 aa10.97□□□□□ -0.65
PROM1-215ENST00000513448 ATP2B3Q16720 1220 aa10.97□□□□□ -0.65
PROM1-215ENST00000513448 NSUN7Q8NE18 718 aaKnown RBP10.97□□□□□ -0.65
PROM1-215ENST00000513448 OSBP2Q969R2 916 aa10.97□□□□□ -0.65
PROM1-215ENST00000513448 ANKRD36CQ5JPF3 1778 aa10.97□□□□□ -0.65
PROM1-215ENST00000513448 KDM4AO75164 1064 aa10.97□□□□□ -0.65
PROM1-215ENST00000513448 CHGBP05060 677 aa10.97□□□□□ -0.65
PROM1-215ENST00000513448 ITGA6P23229 1130 aa10.97□□□□□ -0.65
PROM1-215ENST00000513448 METTL24Q5JXM2 366 aa10.97□□□□□ -0.65
PROM1-215ENST00000513448 RBM43Q6ZSC3 357 aaKnown RBP10.97□□□□□ -0.65
PROM1-215ENST00000513448 FERMT3Q86UX7 667 aa10.97□□□□□ -0.65
PROM1-215ENST00000513448 THRAP3Q9Y2W1 955 aaKnown RBP10.97□□□□□ -0.65
PROM1-215ENST00000513448 ZNF330Q9Y3S2 320 aaPredicted RBP10.97□□□□□ -0.65
PROM1-215ENST00000513448 COL22A1Q8NFW1 1626 aaPredicted RBP10.97□□□□□ -0.65
PROM1-215ENST00000513448 SALL1Q9NSC2 1324 aa10.97□□□□□ -0.65
PROM1-215ENST00000513448 LAMA4Q16363 1823 aa10.97□□□□□ -0.65
PROM1-215ENST00000513448 KDM4FA0A1W2PPD8 638 aa10.96□□□□□ -0.65
PROM1-215ENST00000513448 M0R2C6 588 aa10.96□□□□□ -0.65
PROM1-215ENST00000513448 IRS4O14654 1257 aaPredicted RBP10.96□□□□□ -0.65
PROM1-215ENST00000513448 JAK2O60674 1132 aa10.96□□□□□ -0.65
PROM1-215ENST00000513448 TPM3P06753 285 aa10.96□□□□□ -0.65
PROM1-215ENST00000513448 UQCRFS1P1P0C7P4 283 aa10.96□□□□□ -0.65
PROM1-215ENST00000513448 HCLS1P14317 486 aaPredicted RBP10.96□□□□□ -0.65
PROM1-215ENST00000513448 PDIA3P30101 505 aaKnown RBP10.96□□□□□ -0.65
PROM1-215ENST00000513448 NAP1L5Q96NT1 182 aaPredicted RBP10.96□□□□□ -0.65
PROM1-215ENST00000513448 CCDC9Q9Y3X0 531 aaKnown RBP10.96□□□□□ -0.65
PROM1-215ENST00000513448 RIC1Q4ADV7 1423 aa10.96□□□□□ -0.66
PROM1-215ENST00000513448 PDE8BO95263 885 aa10.96□□□□□ -0.66
PROM1-215ENST00000513448 UBE3CQ15386 1083 aa10.96□□□□□ -0.66
PROM1-215ENST00000513448 HLFQ16534 295 aa10.96□□□□□ -0.66
PROM1-215ENST00000513448 WASHC4Q2M389 1173 aa10.96□□□□□ -0.66
PROM1-215ENST00000513448 GIMAP6Q6P9H5 292 aa10.96□□□□□ -0.66
PROM1-215ENST00000513448 ZNF34Q8IZ26 560 aa10.96□□□□□ -0.66
PROM1-215ENST00000513448 VGLL2Q8N8G2 317 aa10.96□□□□□ -0.66
PROM1-215ENST00000513448 ZNF396Q96N95 335 aaPredicted RBP10.96□□□□□ -0.66
PROM1-215ENST00000513448 CNNM1Q9NRU3 951 aa10.96□□□□□ -0.66
PROM1-215ENST00000513448 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.96□□□□□ -0.66
PROM1-215ENST00000513448 TRMT112Q9UI30 125 aaKnown RBP10.96□□□□□ -0.66
PROM1-215ENST00000513448 MYH3P11055 1940 aa10.96□□□□□ -0.66
PROM1-215ENST00000513448 MROH5Q6ZUA9 1318 aa10.95□□□□□ -0.66
PROM1-215ENST00000513448 ATRNO75882 1429 aa10.95□□□□□ -0.66
PROM1-215ENST00000513448 PTPDC1A2A3K4 754 aa10.95□□□□□ -0.66
PROM1-215ENST00000513448 FGAP02671 866 aa10.95□□□□□ -0.66
PROM1-215ENST00000513448 PTMAP06454 111 aaKnown RBP10.95□□□□□ -0.66
PROM1-215ENST00000513448 TPM2P07951 284 aa10.95□□□□□ -0.66
PROM1-215ENST00000513448 ADORA1P30542 326 aa10.95□□□□□ -0.66
PROM1-215ENST00000513448 ZAP70P43403 619 aa10.95□□□□□ -0.66
PROM1-215ENST00000513448 APOBRQ0VD83 1088 aa10.95□□□□□ -0.66
PROM1-215ENST00000513448 NCOA7Q8NI08 942 aa10.95□□□□□ -0.66
PROM1-215ENST00000513448 FAM200AQ8TCP9 573 aa10.95□□□□□ -0.66
PROM1-215ENST00000513448 GREM2Q9H772 168 aa10.95□□□□□ -0.66
PROM1-215ENST00000513448 USP25Q9UHP3 1055 aa10.95□□□□□ -0.66
PROM1-215ENST00000513448 RCOR1Q9UKL0 485 aa10.95□□□□□ -0.66
PROM1-215ENST00000513448 ZNF213O14771 459 aa10.94□□□□□ -0.66
PROM1-215ENST00000513448 CTAGE5O15320 804 aa10.94□□□□□ -0.66
PROM1-215ENST00000513448 CTDNEP1O95476 244 aa10.94□□□□□ -0.66
PROM1-215ENST00000513448 ADCY5O95622 1261 aa10.94□□□□□ -0.66
PROM1-215ENST00000513448 ARID4AP29374 1257 aaPredicted RBP10.94□□□□□ -0.66
PROM1-215ENST00000513448 ADD2P35612 726 aa10.94□□□□□ -0.66
PROM1-215ENST00000513448 DZIP3Q86Y13 1208 aaKnown RBP10.94□□□□□ -0.66
PROM1-215ENST00000513448 LPIN2Q92539 896 aa10.94□□□□□ -0.66
PROM1-215ENST00000513448 SLC4A9Q96Q91 983 aa10.94□□□□□ -0.66
PROM1-215ENST00000513448 TNMDQ9H2S6 317 aa10.94□□□□□ -0.66
PROM1-215ENST00000513448 CLSTN2Q9H4D0 955 aa10.94□□□□□ -0.66
PROM1-215ENST00000513448 ZBTB1Q9Y2K1 713 aa10.94□□□□□ -0.66
PROM1-215ENST00000513448 AHDC1Q5TGY3 1603 aaPredicted RBP10.94□□□□□ -0.66
PROM1-215ENST00000513448 GPAA1O43292 621 aa10.94□□□□□ -0.66
PROM1-215ENST00000513448 FAM173BQ6P4H8 233 aa10.94□□□□□ -0.66
PROM1-215ENST00000513448 LRRC2Q9BYS8 371 aa10.94□□□□□ -0.66
PROM1-215ENST00000513448 ANO8Q9HCE9 1232 aaPredicted RBP10.94□□□□□ -0.66
PROM1-215ENST00000513448 DACT1Q9NYF0 836 aa10.94□□□□□ -0.66
PROM1-215ENST00000513448 TFIP11Q9UBB9 837 aaKnown RBP10.94□□□□□ -0.66
PROM1-215ENST00000513448 TBC1D2BQ9UPU7 963 aa10.94□□□□□ -0.66
PROM1-215ENST00000513448 ZMYM6O95789 1325 aa10.94□□□□□ -0.66
PROM1-215ENST00000513448 MYH7P12883 1935 aa10.93□□□□□ -0.66
PROM1-215ENST00000513448 NUP98P52948 1817 aa10.93□□□□□ -0.66
PROM1-215ENST00000513448 LIG1P18858 919 aa10.93□□□□□ -0.66
PROM1-215ENST00000513448 MCAMP43121 646 aa10.93□□□□□ -0.66
PROM1-215ENST00000513448 TRDNQ13061 729 aa10.93□□□□□ -0.66
PROM1-215ENST00000513448 PUM3Q15397 648 aaKnown RBP10.93□□□□□ -0.66
PROM1-215ENST00000513448 PARP10Q53GL7 1025 aa10.93□□□□□ -0.66
PROM1-215ENST00000513448 RALYLQ86SE5 291 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms