RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 NPHP1O15259 732 aa29.28■■■□□ 2.28
SPOCK3-221ENST00000512648 MCM2P49736 904 aa29.28■■■□□ 2.28
SPOCK3-221ENST00000512648 COL23A1Q86Y22 540 aaPredicted RBP29.28■■■□□ 2.28
SPOCK3-221ENST00000512648 ANTXR1Q9H6X2 564 aa29.28■■■□□ 2.28
SPOCK3-221ENST00000512648 PHKA1P46020 1223 aa29.27■■■□□ 2.28
SPOCK3-221ENST00000512648 ZSCAN25Q6NSZ9 544 aa29.26■■■□□ 2.27
SPOCK3-221ENST00000512648 CAMKK2Q96RR4 588 aa29.26■■■□□ 2.27
SPOCK3-221ENST00000512648 TM6SF1Q9BZW5 370 aa29.26■■■□□ 2.27
SPOCK3-221ENST00000512648 SNX14Q9Y5W7 946 aa29.26■■■□□ 2.27
SPOCK3-221ENST00000512648 DDR1Q08345 913 aa29.25■■■□□ 2.27
SPOCK3-221ENST00000512648 GRAPQ13588 217 aa29.25■■■□□ 2.27
SPOCK3-221ENST00000512648 TSGA10IPQ3SY00 556 aa29.25■■■□□ 2.27
SPOCK3-221ENST00000512648 GRAPLQ8TC17 118 aaPredicted RBP29.25■■■□□ 2.27
SPOCK3-221ENST00000512648 COL4A1P02462 1669 aa29.25■■■□□ 2.27
SPOCK3-221ENST00000512648 ZNF804BA4D1E1 1349 aa29.25■■■□□ 2.27
SPOCK3-221ENST00000512648 CD2BP2O95400 341 aaKnown RBP29.24■■■□□ 2.27
SPOCK3-221ENST00000512648 ZNF589Q86UQ0 364 aaPredicted RBP29.24■■■□□ 2.27
SPOCK3-221ENST00000512648 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.24■■■□□ 2.27
SPOCK3-221ENST00000512648 CYP2E1P05181 493 aaPredicted RBP29.23■■■□□ 2.27
SPOCK3-221ENST00000512648 HOXA10P31260 410 aaPredicted RBP29.23■■■□□ 2.27
SPOCK3-221ENST00000512648 HMG20BQ9P0W2 317 aa29.23■■■□□ 2.27
SPOCK3-221ENST00000512648 RBM8AQ9Y5S9 174 aaKnown RBP29.23■■■□□ 2.27
SPOCK3-221ENST00000512648 RNF20Q5VTR2 975 aa29.22■■■□□ 2.27
SPOCK3-221ENST00000512648 SPATA5Q8NB90 893 aa29.22■■■□□ 2.27
SPOCK3-221ENST00000512648 DSCC1Q9BVC3 393 aa29.22■■■□□ 2.27
SPOCK3-221ENST00000512648 ZKSCAN1P17029 563 aaPredicted RBP29.21■■■□□ 2.27
SPOCK3-221ENST00000512648 NEK4P51957 841 aa29.21■■■□□ 2.27
SPOCK3-221ENST00000512648 RASEFQ8IZ41 740 aa29.21■■■□□ 2.27
SPOCK3-221ENST00000512648 CCDC24Q8N4L8 307 aa29.21■■■□□ 2.27
SPOCK3-221ENST00000512648 U3KPZ7 1027 aaPredicted RBP29.21■■■□□ 2.27
SPOCK3-221ENST00000512648 CASZ1Q86V15 1759 aa29.21■■■□□ 2.27
SPOCK3-221ENST00000512648 TNRC6CQ9HCJ0 1690 aaKnown RBP29.2■■■□□ 2.27
SPOCK3-221ENST00000512648 UBE3CQ15386 1083 aa29.2■■■□□ 2.26
SPOCK3-221ENST00000512648 CREB3L3Q68CJ9 461 aa29.2■■■□□ 2.26
SPOCK3-221ENST00000512648 APPBP2Q92624 585 aa29.2■■■□□ 2.26
SPOCK3-221ENST00000512648 GNL3LQ9NVN8 582 aaKnown RBP29.2■■■□□ 2.26
SPOCK3-221ENST00000512648 AKAP11Q9UKA4 1901 aa29.2■■■□□ 2.26
SPOCK3-221ENST00000512648 PNPLA7Q6ZV29 1317 aa29.2■■■□□ 2.26
SPOCK3-221ENST00000512648 SNAP23O00161 211 aa29.19■■■□□ 2.26
SPOCK3-221ENST00000512648 RBM17Q96I25 401 aaKnown RBP29.19■■■□□ 2.26
SPOCK3-221ENST00000512648 CRAMP1Q96RY5 1269 aa29.19■■■□□ 2.26
SPOCK3-221ENST00000512648 BCAMP50895 628 aa29.18■■■□□ 2.26
SPOCK3-221ENST00000512648 RASGRF1Q13972 1273 aa29.18■■■□□ 2.26
SPOCK3-221ENST00000512648 CAVIN4Q5BKX8 364 aa29.18■■■□□ 2.26
SPOCK3-221ENST00000512648 PRPF40BQ6NWY9 871 aaKnown RBP29.18■■■□□ 2.26
SPOCK3-221ENST00000512648 PI16Q6UXB8 463 aa29.18■■■□□ 2.26
SPOCK3-221ENST00000512648 FBXO33Q7Z6M2 555 aa29.18■■■□□ 2.26
SPOCK3-221ENST00000512648 SEC62Q99442 399 aaKnown RBP29.18■■■□□ 2.26
SPOCK3-221ENST00000512648 BRIP1Q9BX63 1249 aa29.18■■■□□ 2.26
SPOCK3-221ENST00000512648 SEMA3EO15041 775 aa29.17■■■□□ 2.26
SPOCK3-221ENST00000512648 BBOX1O75936 387 aa29.17■■■□□ 2.26
SPOCK3-221ENST00000512648 ADD2P35612 726 aa29.17■■■□□ 2.26
SPOCK3-221ENST00000512648 RPGRQ92834 1020 aaKnown RBP29.17■■■□□ 2.26
SPOCK3-221ENST00000512648 PIH1D3Q9NQM4 214 aaKnown RBP29.17■■■□□ 2.26
SPOCK3-221ENST00000512648 LEMD3Q9Y2U8 911 aa29.17■■■□□ 2.26
SPOCK3-221ENST00000512648 PDS5AQ29RF7 1337 aaKnown RBP29.17■■■□□ 2.26
SPOCK3-221ENST00000512648 SLC27A2O14975 620 aa29.17■■■□□ 2.26
SPOCK3-221ENST00000512648 DDIT3P35638 169 aa29.17■■■□□ 2.26
SPOCK3-221ENST00000512648 KCNJ4P48050 445 aa29.17■■■□□ 2.26
SPOCK3-221ENST00000512648 OSBP2Q969R2 916 aa29.17■■■□□ 2.26
SPOCK3-221ENST00000512648 ZSWIM6Q9HCJ5 1215 aa29.17■■■□□ 2.26
SPOCK3-221ENST00000512648 MAST3O60307 1309 aa29.16■■■□□ 2.26
SPOCK3-221ENST00000512648 CHGBP05060 677 aa29.16■■■□□ 2.26
SPOCK3-221ENST00000512648 SLC15A2Q16348 729 aa29.16■■■□□ 2.26
SPOCK3-221ENST00000512648 TMC4Q7Z404 712 aa29.16■■■□□ 2.26
SPOCK3-221ENST00000512648 FAM84BQ96KN1 310 aaPredicted RBP29.16■■■□□ 2.26
SPOCK3-221ENST00000512648 A0A1B0GUL6 1792 aa29.15■■■□□ 2.26
SPOCK3-221ENST00000512648 PSMA5P28066 241 aa29.15■■■□□ 2.26
SPOCK3-221ENST00000512648 C15orf52Q6ZUT6 534 aaKnown RBP29.15■■■□□ 2.26
SPOCK3-221ENST00000512648 CIZ1Q9ULV3 898 aaPredicted RBP29.15■■■□□ 2.26
SPOCK3-221ENST00000512648 NRXN2Q9P2S2 1712 aa29.15■■■□□ 2.26
SPOCK3-221ENST00000512648 IGSF3O75054 1194 aa29.14■■■□□ 2.26
SPOCK3-221ENST00000512648 KRT32Q14532 448 aa29.14■■■□□ 2.26
SPOCK3-221ENST00000512648 EZH2Q15910 746 aaKnown RBP29.14■■■□□ 2.26
SPOCK3-221ENST00000512648 TTC14Q96N46 770 aa29.14■■■□□ 2.26
SPOCK3-221ENST00000512648 CCDC129Q6ZRS4 1044 aa29.13■■■□□ 2.25
SPOCK3-221ENST00000512648 DENND2AQ9ULE3 1009 aa29.13■■■□□ 2.25
SPOCK3-221ENST00000512648 IRS2Q9Y4H2 1338 aa29.13■■■□□ 2.25
SPOCK3-221ENST00000512648 HSPD1P10809 573 aaKnown RBP29.12■■■□□ 2.25
SPOCK3-221ENST00000512648 EN1Q05925 392 aaPredicted RBP29.12■■■□□ 2.25
SPOCK3-221ENST00000512648 MAP3K12Q12852 859 aa29.12■■■□□ 2.25
SPOCK3-221ENST00000512648 SLC9C2Q5TAH2 1124 aa29.12■■■□□ 2.25
SPOCK3-221ENST00000512648 ALDH8A1Q9H2A2 487 aaPredicted RBP29.12■■■□□ 2.25
SPOCK3-221ENST00000512648 STK32BQ9NY57 414 aa29.12■■■□□ 2.25
SPOCK3-221ENST00000512648 M0R2C6 588 aa29.11■■■□□ 2.25
SPOCK3-221ENST00000512648 CHMP5Q9NZZ3 219 aa29.11■■■□□ 2.25
SPOCK3-221ENST00000512648 RPAP1Q9BWH6 1393 aaPredicted RBP29.11■■■□□ 2.25
SPOCK3-221ENST00000512648 TCRBV5S4A2TA0A5A2 114 aa29.1■■■□□ 2.25
SPOCK3-221ENST00000512648 PDE6AP16499 860 aa29.1■■■□□ 2.25
SPOCK3-221ENST00000512648 BAG6P46379 1132 aa29.1■■■□□ 2.25
SPOCK3-221ENST00000512648 WASHC4Q2M389 1173 aa29.1■■■□□ 2.25
SPOCK3-221ENST00000512648 VPS53Q5VIR6 699 aa29.1■■■□□ 2.25
SPOCK3-221ENST00000512648 TMED8Q6PL24 325 aaPredicted RBP29.1■■■□□ 2.25
SPOCK3-221ENST00000512648 PARP3Q9Y6F1 533 aa29.1■■■□□ 2.25
SPOCK3-221ENST00000512648 XDHP47989 1333 aa29.1■■■□□ 2.25
SPOCK3-221ENST00000512648 TAF1P21675 1872 aa29.1■■■□□ 2.25
SPOCK3-221ENST00000512648 GYG1P46976 350 aa29.1■■■□□ 2.25
SPOCK3-221ENST00000512648 SLFNL1Q499Z3 407 aa29.1■■■□□ 2.25
SPOCK3-221ENST00000512648 SLKQ9H2G2 1235 aaPredicted RBP29.1■■■□□ 2.25
SPOCK3-221ENST00000512648 CYP46A1Q9Y6A2 500 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms