RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 LETM1O95202 739 aaPredicted RBP13.94□□□□□ -0.18
PRDM16-207ENST00000512462 BRD1O95696 1058 aa13.94□□□□□ -0.18
PRDM16-207ENST00000512462 PCDH11XQ9BZA7 1347 aa13.94□□□□□ -0.18
PRDM16-207ENST00000512462 PCDH11YQ9BZA8 1340 aa13.94□□□□□ -0.18
PRDM16-207ENST00000512462 B4E1Z4 1266 aa13.93□□□□□ -0.18
PRDM16-207ENST00000512462 CMTR1Q8N1G2 835 aaKnown RBP13.93□□□□□ -0.18
PRDM16-207ENST00000512462 MAGEB6Q8N7X4 407 aa13.93□□□□□ -0.18
PRDM16-207ENST00000512462 FTOQ9C0B1 505 aaKnown RBP eCLIP13.93□□□□□ -0.18
PRDM16-207ENST00000512462 GPHNQ9NQX3 736 aaPredicted RBP13.93□□□□□ -0.18
PRDM16-207ENST00000512462 DLG5Q8TDM6 1919 aa13.93□□□□□ -0.18
PRDM16-207ENST00000512462 CCDC34Q96HJ3 373 aa13.93□□□□□ -0.18
PRDM16-207ENST00000512462 SLC12A7Q9Y666 1083 aa13.93□□□□□ -0.18
PRDM16-207ENST00000512462 SLC5A1P13866 664 aa13.93□□□□□ -0.18
PRDM16-207ENST00000512462 RPS6KB1P23443 525 aa13.93□□□□□ -0.18
PRDM16-207ENST00000512462 METAP2P50579 478 aaKnown RBP eCLIP13.93□□□□□ -0.18
PRDM16-207ENST00000512462 ZSCAN25Q6NSZ9 544 aa13.93□□□□□ -0.18
PRDM16-207ENST00000512462 GNL3LQ9NVN8 582 aaKnown RBP13.93□□□□□ -0.18
PRDM16-207ENST00000512462 XRN1Q8IZH2 1706 aaKnown RBP13.93□□□□□ -0.18
PRDM16-207ENST00000512462 A0A1B0GVL5 298 aa13.92□□□□□ -0.18
PRDM16-207ENST00000512462 RNF113AO15541 343 aaKnown RBP13.92□□□□□ -0.18
PRDM16-207ENST00000512462 SPECC1Q5M775 1068 aa13.92□□□□□ -0.18
PRDM16-207ENST00000512462 NCOA7Q8NI08 942 aa13.92□□□□□ -0.18
PRDM16-207ENST00000512462 USP31Q70CQ4 1352 aa13.92□□□□□ -0.18
PRDM16-207ENST00000512462 AMOTL1Q8IY63 956 aa13.92□□□□□ -0.18
PRDM16-207ENST00000512462 PHKBQ93100 1093 aa13.92□□□□□ -0.18
PRDM16-207ENST00000512462 INTS4Q96HW7 963 aaKnown RBP13.92□□□□□ -0.18
PRDM16-207ENST00000512462 PEAK1Q9H792 1746 aa13.92□□□□□ -0.18
PRDM16-207ENST00000512462 CRB1P82279 1406 aa13.92□□□□□ -0.18
PRDM16-207ENST00000512462 KDRP35968 1356 aa13.91□□□□□ -0.18
PRDM16-207ENST00000512462 ZPR1O75312 459 aa13.91□□□□□ -0.18
PRDM16-207ENST00000512462 CYP7A1P22680 504 aa13.91□□□□□ -0.18
PRDM16-207ENST00000512462 OLFM4Q6UX06 510 aa13.91□□□□□ -0.18
PRDM16-207ENST00000512462 TSC1Q92574 1164 aa13.91□□□□□ -0.18
PRDM16-207ENST00000512462 HMG20BQ9P0W2 317 aa13.91□□□□□ -0.18
PRDM16-207ENST00000512462 ZBTB1Q9Y2K1 713 aa13.91□□□□□ -0.18
PRDM16-207ENST00000512462 AK9Q5TCS8 1911 aa13.91□□□□□ -0.18
PRDM16-207ENST00000512462 MCM5P33992 734 aa13.91□□□□□ -0.18
PRDM16-207ENST00000512462 KBTBD3Q8NAB2 608 aa13.91□□□□□ -0.18
PRDM16-207ENST00000512462 PDCL3Q9H2J4 239 aa13.91□□□□□ -0.18
PRDM16-207ENST00000512462 OSBPL3Q9H4L5 887 aa13.91□□□□□ -0.18
PRDM16-207ENST00000512462 SLC4A4Q9Y6R1 1079 aa13.91□□□□□ -0.18
PRDM16-207ENST00000512462 VIRMAQ69YN4 1812 aaKnown RBP13.91□□□□□ -0.18
PRDM16-207ENST00000512462 LIG1P18858 919 aa13.91□□□□□ -0.18
PRDM16-207ENST00000512462 IKQ13123 557 aaPredicted RBP13.91□□□□□ -0.18
PRDM16-207ENST00000512462 DHX32Q7L7V1 743 aaKnown RBP13.91□□□□□ -0.18
PRDM16-207ENST00000512462 CCDC186Q7Z3E2 898 aa13.91□□□□□ -0.18
PRDM16-207ENST00000512462 CEP57L1Q8IYX8 460 aa13.91□□□□□ -0.18
PRDM16-207ENST00000512462 NAT10Q9H0A0 1025 aaKnown RBP13.91□□□□□ -0.18
PRDM16-207ENST00000512462 STAP2Q9UGK3 403 aa13.91□□□□□ -0.18
PRDM16-207ENST00000512462 TAF6LQ9Y6J9 622 aa13.91□□□□□ -0.18
PRDM16-207ENST00000512462 RGPD8O14715 1765 aaPredicted RBP13.9□□□□□ -0.18
PRDM16-207ENST00000512462 VGLL3A8MV65 326 aa13.9□□□□□ -0.18
PRDM16-207ENST00000512462 F8W031 263 aaPredicted RBP13.9□□□□□ -0.18
PRDM16-207ENST00000512462 IARSP41252 1262 aaKnown RBP13.9□□□□□ -0.18
PRDM16-207ENST00000512462 ARMT1Q9H993 441 aa13.9□□□□□ -0.18
PRDM16-207ENST00000512462 VAT1LQ9HCJ6 419 aa13.9□□□□□ -0.18
PRDM16-207ENST00000512462 BABAM1Q9NWV8 329 aa13.9□□□□□ -0.18
PRDM16-207ENST00000512462 PPP1R1BQ9UD71 204 aaPredicted RBP13.9□□□□□ -0.18
PRDM16-207ENST00000512462 CLIP2Q9UDT6 1046 aa13.9□□□□□ -0.18
PRDM16-207ENST00000512462 GPAA1O43292 621 aa13.9□□□□□ -0.18
PRDM16-207ENST00000512462 PTPN12Q05209 780 aaKnown RBP13.9□□□□□ -0.18
PRDM16-207ENST00000512462 FAM98CQ17RN3 349 aaKnown RBP13.9□□□□□ -0.18
PRDM16-207ENST00000512462 CFAP100Q494V2 611 aa13.9□□□□□ -0.18
PRDM16-207ENST00000512462 GREM2Q9H772 168 aa13.9□□□□□ -0.18
PRDM16-207ENST00000512462 PRDM10Q9NQV6 1147 aa13.9□□□□□ -0.18
PRDM16-207ENST00000512462 GJB4Q9NTQ9 266 aa13.9□□□□□ -0.18
PRDM16-207ENST00000512462 MBD4O95243 580 aa13.9□□□□□ -0.18
PRDM16-207ENST00000512462 ALG1Q9BT22 464 aa13.9□□□□□ -0.18
PRDM16-207ENST00000512462 ZDHHC9Q9Y397 364 aa13.9□□□□□ -0.18
PRDM16-207ENST00000512462 CEP170BQ9Y4F5 1589 aaPredicted RBP13.9□□□□□ -0.18
PRDM16-207ENST00000512462 NPHP4O75161 1426 aaPredicted RBP13.89□□□□□ -0.19
PRDM16-207ENST00000512462 CAVIN4Q5BKX8 364 aa13.89□□□□□ -0.19
PRDM16-207ENST00000512462 CYP21A2P08686 494 aa13.89□□□□□ -0.19
PRDM16-207ENST00000512462 HMGN5P82970 282 aaKnown RBP13.89□□□□□ -0.19
PRDM16-207ENST00000512462 CTDSPL2Q05D32 466 aa13.89□□□□□ -0.19
PRDM16-207ENST00000512462 TYRO3Q06418 890 aa13.89□□□□□ -0.19
PRDM16-207ENST00000512462 CPLX3Q8WVH0 158 aa13.89□□□□□ -0.19
PRDM16-207ENST00000512462 RIMS1Q86UR5 1692 aaKnown RBP13.89□□□□□ -0.19
PRDM16-207ENST00000512462 HMGB1P09429 215 aaKnown RBP13.89□□□□□ -0.19
PRDM16-207ENST00000512462 CLCN1P35523 988 aa13.89□□□□□ -0.19
PRDM16-207ENST00000512462 USP5P45974 858 aa13.89□□□□□ -0.19
PRDM16-207ENST00000512462 MFSD6Q6ZSS7 791 aa13.89□□□□□ -0.19
PRDM16-207ENST00000512462 ADCY9O60503 1353 aa13.89□□□□□ -0.19
PRDM16-207ENST00000512462 RGPD1P0DJD0 1748 aa13.88□□□□□ -0.19
PRDM16-207ENST00000512462 NBPF5PQ86XG9 351 aaPredicted RBP13.88□□□□□ -0.19
PRDM16-207ENST00000512462 XBP1P17861 261 aa13.88□□□□□ -0.19
PRDM16-207ENST00000512462 RBM5P52756 815 aaKnown RBP eCLIP13.88□□□□□ -0.19
PRDM16-207ENST00000512462 TTC6Q86TZ1 520 aa13.88□□□□□ -0.19
PRDM16-207ENST00000512462 DZIP1Q86YF9 867 aaKnown RBP13.88□□□□□ -0.19
PRDM16-207ENST00000512462 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.88□□□□□ -0.19
PRDM16-207ENST00000512462 MTMR6Q9Y217 621 aa13.88□□□□□ -0.19
PRDM16-207ENST00000512462 V9GYY5 206 aaPredicted RBP13.88□□□□□ -0.19
PRDM16-207ENST00000512462 KIF24Q5T7B8 1368 aa13.88□□□□□ -0.19
PRDM16-207ENST00000512462 ATP10DQ9P241 1426 aa13.88□□□□□ -0.19
PRDM16-207ENST00000512462 CCDC191Q8NCU4 936 aa13.88□□□□□ -0.19
PRDM16-207ENST00000512462 TFCP2L1Q9NZI6 479 aa13.88□□□□□ -0.19
PRDM16-207ENST00000512462 STX8Q9UNK0 236 aa13.88□□□□□ -0.19
PRDM16-207ENST00000512462 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.88□□□□□ -0.19
PRDM16-207ENST00000512462 ZBTB43O43298 467 aa13.87□□□□□ -0.19
PRDM16-207ENST00000512462 PTGS1P23219 599 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms