RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 ITGA6P23229 1130 aa18.76■□□□□ 0.59
CCHCR1-229ENST00000512418 BRPF1P55201 1214 aaPredicted RBP18.76■□□□□ 0.59
CCHCR1-229ENST00000512418 NOGQ13253 232 aa18.76■□□□□ 0.59
CCHCR1-229ENST00000512418 GBA2Q9HCG7 927 aaPredicted RBP18.76■□□□□ 0.59
CCHCR1-229ENST00000512418 WTIPA6NIX2 430 aaPredicted RBP18.75■□□□□ 0.59
CCHCR1-229ENST00000512418 FAM161AQ3B820 660 aa18.75■□□□□ 0.59
CCHCR1-229ENST00000512418 C2orf69Q8N8R5 385 aa18.75■□□□□ 0.59
CCHCR1-229ENST00000512418 LEMD3Q9Y2U8 911 aa18.75■□□□□ 0.59
CCHCR1-229ENST00000512418 ASTN2O75129 1339 aaPredicted RBP18.74■□□□□ 0.59
CCHCR1-229ENST00000512418 CSF1RP07333 972 aa18.74■□□□□ 0.59
CCHCR1-229ENST00000512418 SCARF1Q14162 830 aa18.74■□□□□ 0.59
CCHCR1-229ENST00000512418 MPHOSPH8Q99549 860 aa18.74■□□□□ 0.59
CCHCR1-229ENST00000512418 ANKRD2Q9GZV1 360 aa18.74■□□□□ 0.59
CCHCR1-229ENST00000512418 COA1Q9GZY4 146 aa18.74■□□□□ 0.59
CCHCR1-229ENST00000512418 MYOZ2Q9NPC6 264 aa18.74■□□□□ 0.59
CCHCR1-229ENST00000512418 ANGEL2Q5VTE6 544 aaKnown RBP18.73■□□□□ 0.59
CCHCR1-229ENST00000512418 RGMBQ6NW40 437 aa18.73■□□□□ 0.59
CCHCR1-229ENST00000512418 SPINK5Q9NQ38 1064 aaPredicted RBP18.73■□□□□ 0.59
CCHCR1-229ENST00000512418 MYO3BQ8WXR4 1341 aa18.73■□□□□ 0.59
CCHCR1-229ENST00000512418 PITPNM2Q9BZ72 1349 aa18.73■□□□□ 0.59
CCHCR1-229ENST00000512418 ZNF646O15015 1829 aaPredicted RBP18.72■□□□□ 0.59
CCHCR1-229ENST00000512418 DACT2Q5SW24 774 aa18.72■□□□□ 0.59
CCHCR1-229ENST00000512418 CDCA5Q96FF9 252 aa18.72■□□□□ 0.59
CCHCR1-229ENST00000512418 TSKSQ9UJT2 592 aa18.72■□□□□ 0.59
CCHCR1-229ENST00000512418 ZNF804BA4D1E1 1349 aa18.72■□□□□ 0.59
CCHCR1-229ENST00000512418 ANKRD18BA2A2Z9 1011 aa18.71■□□□□ 0.59
CCHCR1-229ENST00000512418 STRIP1Q5VSL9 837 aa18.71■□□□□ 0.59
CCHCR1-229ENST00000512418 TXNRD3Q86VQ6 643 aa18.71■□□□□ 0.59
CCHCR1-229ENST00000512418 FAM9BQ8IZU0 186 aa18.71■□□□□ 0.59
CCHCR1-229ENST00000512418 CCDC102AQ96A19 550 aa18.71■□□□□ 0.59
CCHCR1-229ENST00000512418 F6X3S4 739 aa18.7■□□□□ 0.58
CCHCR1-229ENST00000512418 BEND3Q5T5X7 828 aa18.7■□□□□ 0.58
CCHCR1-229ENST00000512418 OGFOD1Q8N543 542 aa18.7■□□□□ 0.58
CCHCR1-229ENST00000512418 FBXW7Q969H0 707 aa18.7■□□□□ 0.58
CCHCR1-229ENST00000512418 FAM155AB1AL88 458 aaPredicted RBP18.69■□□□□ 0.58
CCHCR1-229ENST00000512418 KCNJ4P48050 445 aa18.69■□□□□ 0.58
CCHCR1-229ENST00000512418 ZNF157P51786 506 aaPredicted RBP18.69■□□□□ 0.58
CCHCR1-229ENST00000512418 CHRNDQ07001 517 aa18.69■□□□□ 0.58
CCHCR1-229ENST00000512418 IFIT5Q13325 482 aaKnown RBP18.69■□□□□ 0.58
CCHCR1-229ENST00000512418 ABHD8Q96I13 439 aa18.69■□□□□ 0.58
CCHCR1-229ENST00000512418 ZIC5Q96T25 663 aa18.69■□□□□ 0.58
CCHCR1-229ENST00000512418 PAPPA2Q9BXP8 1791 aa18.68■□□□□ 0.58
CCHCR1-229ENST00000512418 KLRK1P26718 216 aa18.68■□□□□ 0.58
CCHCR1-229ENST00000512418 MMP14P50281 582 aa18.68■□□□□ 0.58
CCHCR1-229ENST00000512418 FKBP1BP68106 108 aa18.68■□□□□ 0.58
CCHCR1-229ENST00000512418 FOXO4P98177 505 aa18.68■□□□□ 0.58
CCHCR1-229ENST00000512418 MXD3Q9BW11 206 aa18.68■□□□□ 0.58
CCHCR1-229ENST00000512418 TTLL5Q6EMB2 1281 aa18.67■□□□□ 0.58
CCHCR1-229ENST00000512418 A0A1B0GUL6 1792 aa18.67■□□□□ 0.58
CCHCR1-229ENST00000512418 GRM8O00222 908 aa18.66■□□□□ 0.58
CCHCR1-229ENST00000512418 SLC10A3P09131 477 aa18.66■□□□□ 0.58
CCHCR1-229ENST00000512418 NBPF9Q3BBW0 867 aa18.66■□□□□ 0.58
CCHCR1-229ENST00000512418 CHMP3Q9Y3E7 222 aa18.66■□□□□ 0.58
CCHCR1-229ENST00000512418 WNT10BO00744 389 aa18.65■□□□□ 0.58
CCHCR1-229ENST00000512418 GTF2IP78347 998 aa18.65■□□□□ 0.58
CCHCR1-229ENST00000512418 LMBR1LQ6UX01 489 aa18.65■□□□□ 0.58
CCHCR1-229ENST00000512418 C15orf52Q6ZUT6 534 aaKnown RBP18.65■□□□□ 0.58
CCHCR1-229ENST00000512418 CD209Q9NNX6 404 aa18.65■□□□□ 0.58
CCHCR1-229ENST00000512418 SAGE1Q9NXZ1 904 aa18.65■□□□□ 0.58
CCHCR1-229ENST00000512418 HDAC9Q9UKV0 1011 aa18.65■□□□□ 0.58
CCHCR1-229ENST00000512418 ZNF521Q96K83 1311 aa18.65■□□□□ 0.58
CCHCR1-229ENST00000512418 ALDH1L1O75891 902 aa18.64■□□□□ 0.57
CCHCR1-229ENST00000512418 KIF23Q02241 960 aaPredicted RBP18.64■□□□□ 0.57
CCHCR1-229ENST00000512418 CCDC57Q2TAC2 916 aa18.64■□□□□ 0.57
CCHCR1-229ENST00000512418 SCAF8Q9UPN6 1271 aaKnown RBP18.64■□□□□ 0.57
CCHCR1-229ENST00000512418 IRS2Q9Y4H2 1338 aa18.64■□□□□ 0.57
CCHCR1-229ENST00000512418 CASP8AP2Q9UKL3 1982 aa18.63■□□□□ 0.57
CCHCR1-229ENST00000512418 TAF5LO75529 589 aa18.63■□□□□ 0.57
CCHCR1-229ENST00000512418 TAF7LQ5H9L4 462 aa18.63■□□□□ 0.57
CCHCR1-229ENST00000512418 EPHA10Q5JZY3 1008 aa18.63■□□□□ 0.57
CCHCR1-229ENST00000512418 SLC4A10Q6U841 1118 aa18.63■□□□□ 0.57
CCHCR1-229ENST00000512418 KIAA0825Q8IV33 1275 aa18.63■□□□□ 0.57
CCHCR1-229ENST00000512418 SRCIN1Q9C0H9 1055 aa18.63■□□□□ 0.57
CCHCR1-229ENST00000512418 C9orf78Q9NZ63 289 aaPredicted RBP18.63■□□□□ 0.57
CCHCR1-229ENST00000512418 SNAP23O00161 211 aa18.62■□□□□ 0.57
CCHCR1-229ENST00000512418 SASH1O94885 1247 aa18.62■□□□□ 0.57
CCHCR1-229ENST00000512418 LDHAL6AQ6ZMR3 332 aa18.62■□□□□ 0.57
CCHCR1-229ENST00000512418 RASAL3Q86YV0 1011 aa18.62■□□□□ 0.57
CCHCR1-229ENST00000512418 HELBQ8NG08 1087 aaPredicted RBP18.62■□□□□ 0.57
CCHCR1-229ENST00000512418 ZNF804AQ7Z570 1209 aa18.61■□□□□ 0.57
CCHCR1-229ENST00000512418 APOBEC3FQ8IUX4 373 aaKnown RBP18.61■□□□□ 0.57
CCHCR1-229ENST00000512418 REM2Q8IYK8 340 aaPredicted RBP18.61■□□□□ 0.57
CCHCR1-229ENST00000512418 AKAP11Q9UKA4 1901 aa18.61■□□□□ 0.57
CCHCR1-229ENST00000512418 IL1R1P14778 569 aa18.6■□□□□ 0.57
CCHCR1-229ENST00000512418 NF2P35240 595 aa18.6■□□□□ 0.57
CCHCR1-229ENST00000512418 PRAMEF18Q5VWM3 479 aa18.6■□□□□ 0.57
CCHCR1-229ENST00000512418 ZNF594Q96JF6 807 aaPredicted RBP18.6■□□□□ 0.57
CCHCR1-229ENST00000512418 CSRNP1Q96S65 589 aa18.6■□□□□ 0.57
CCHCR1-229ENST00000512418 CNNM1Q9NRU3 951 aa18.6■□□□□ 0.57
CCHCR1-229ENST00000512418 MOB2Q70IA6 237 aa18.59■□□□□ 0.57
CCHCR1-229ENST00000512418 CERS5Q8N5B7 392 aa18.59■□□□□ 0.57
CCHCR1-229ENST00000512418 ZBED3Q96IU2 234 aaPredicted RBP18.59■□□□□ 0.57
CCHCR1-229ENST00000512418 MCOLN1Q9GZU1 580 aa18.59■□□□□ 0.57
CCHCR1-229ENST00000512418 RNF186Q9NXI6 227 aa18.59■□□□□ 0.57
CCHCR1-229ENST00000512418 COL1A1P02452 1464 aaPredicted RBP18.58■□□□□ 0.57
CCHCR1-229ENST00000512418 TRPA1O75762 1119 aa18.58■□□□□ 0.56
CCHCR1-229ENST00000512418 FKBP1AP62942 108 aaKnown RBP18.58■□□□□ 0.56
CCHCR1-229ENST00000512418 TTLL12Q14166 644 aaPredicted RBP18.58■□□□□ 0.56
CCHCR1-229ENST00000512418 SUCLG2Q96I99 432 aa18.58■□□□□ 0.56
CCHCR1-229ENST00000512418 UTYO14607 1347 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms