RNA–Protein interactions for RNA: ENST00000512345.5

LDB2-214, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 923 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-214ENST00000512345 C3orf67Q6ZVT6 689 aa12.81□□□□□ -0.36
LDB2-214ENST00000512345 NLRP3Q96P20 1036 aa12.81□□□□□ -0.36
LDB2-214ENST00000512345 TAF1DQ9H5J8 278 aaPredicted RBP12.81□□□□□ -0.36
LDB2-214ENST00000512345 FZD9O00144 591 aa12.8□□□□□ -0.36
LDB2-214ENST00000512345 PPEF1O14829 653 aaPredicted RBP12.8□□□□□ -0.36
LDB2-214ENST00000512345 GRIPAP1Q4V328 841 aa12.8□□□□□ -0.36
LDB2-214ENST00000512345 SLC10A5Q5PT55 438 aa12.8□□□□□ -0.36
LDB2-214ENST00000512345 JDP2Q8WYK2 163 aa12.8□□□□□ -0.36
LDB2-214ENST00000512345 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.79□□□□□ -0.36
LDB2-214ENST00000512345 SURF6O75683 361 aaKnown RBP12.79□□□□□ -0.36
LDB2-214ENST00000512345 HCLS1P14317 486 aaPredicted RBP12.79□□□□□ -0.36
LDB2-214ENST00000512345 LDHDQ86WU2 507 aa12.79□□□□□ -0.36
LDB2-214ENST00000512345 ZFP91Q96JP5 570 aaPredicted RBP12.79□□□□□ -0.36
LDB2-214ENST00000512345 HACL1Q9UJ83 578 aa12.79□□□□□ -0.36
LDB2-214ENST00000512345 NOP58Q9Y2X3 529 aaKnown RBP12.79□□□□□ -0.36
LDB2-214ENST00000512345 CHMP3Q9Y3E7 222 aa12.79□□□□□ -0.36
LDB2-214ENST00000512345 STK24Q9Y6E0 443 aa12.79□□□□□ -0.36
LDB2-214ENST00000512345 MYH3P11055 1940 aa12.78□□□□□ -0.36
LDB2-214ENST00000512345 PYGBP11216 843 aa12.78□□□□□ -0.36
LDB2-214ENST00000512345 RFX5P48382 616 aaPredicted RBP12.78□□□□□ -0.36
LDB2-214ENST00000512345 CTSWP56202 376 aa12.78□□□□□ -0.36
LDB2-214ENST00000512345 NUCB1Q02818 461 aa12.78□□□□□ -0.36
LDB2-214ENST00000512345 ANKRD45Q5TZF3 282 aa12.78□□□□□ -0.36
LDB2-214ENST00000512345 GPC2Q8N158 579 aa12.78□□□□□ -0.36
LDB2-214ENST00000512345 TTLL11Q8NHH1 800 aa12.78□□□□□ -0.36
LDB2-214ENST00000512345 EXOC6BQ9Y2D4 811 aa12.78□□□□□ -0.36
LDB2-214ENST00000512345 DDX60Q8IY21 1712 aaKnown RBP12.78□□□□□ -0.36
LDB2-214ENST00000512345 SCN4AP35499 1836 aa12.78□□□□□ -0.36
LDB2-214ENST00000512345 LAMB2P55268 1798 aa12.77□□□□□ -0.36
LDB2-214ENST00000512345 RAB11FIP3O75154 756 aa12.77□□□□□ -0.37
LDB2-214ENST00000512345 EIF6P56537 245 aaKnown RBP12.77□□□□□ -0.37
LDB2-214ENST00000512345 PTPN12Q05209 780 aaKnown RBP12.77□□□□□ -0.37
LDB2-214ENST00000512345 CCDC57Q2TAC2 916 aa12.77□□□□□ -0.37
LDB2-214ENST00000512345 EAPPQ56P03 285 aaPredicted RBP12.77□□□□□ -0.37
LDB2-214ENST00000512345 HSP90AB4PQ58FF6 505 aa12.77□□□□□ -0.37
LDB2-214ENST00000512345 SLC51AQ86UW1 340 aa12.77□□□□□ -0.37
LDB2-214ENST00000512345 CHD1LQ86WJ1 897 aa12.77□□□□□ -0.37
LDB2-214ENST00000512345 LARGE2Q8N3Y3 721 aa12.77□□□□□ -0.37
LDB2-214ENST00000512345 TMX4Q9H1E5 349 aaPredicted RBP12.77□□□□□ -0.37
LDB2-214ENST00000512345 COPRSQ9NQ92 184 aa12.77□□□□□ -0.37
LDB2-214ENST00000512345 PA2G4Q9UQ80 394 aaKnown RBP12.77□□□□□ -0.37
LDB2-214ENST00000512345 ATP6V0A2Q9Y487 856 aa12.77□□□□□ -0.37
LDB2-214ENST00000512345 PCNTO95613 3336 aa12.77□□□□□ -0.37
LDB2-214ENST00000512345 APBB1O00213 710 aa12.76□□□□□ -0.37
LDB2-214ENST00000512345 EPHX2P34913 555 aa12.76□□□□□ -0.37
LDB2-214ENST00000512345 G3BP1Q13283 466 aaKnown RBP eCLIP12.76□□□□□ -0.37
LDB2-214ENST00000512345 IFIT5Q13325 482 aaKnown RBP12.76□□□□□ -0.37
LDB2-214ENST00000512345 KLHDC4Q8TBB5 520 aa12.76□□□□□ -0.37
LDB2-214ENST00000512345 CCDC85AQ96PX6 553 aaPredicted RBP12.76□□□□□ -0.37
LDB2-214ENST00000512345 GREM2Q9H772 168 aa12.76□□□□□ -0.37
LDB2-214ENST00000512345 COL4A5P29400 1685 aa12.76□□□□□ -0.37
LDB2-214ENST00000512345 ANKRD18BA2A2Z9 1011 aa12.75□□□□□ -0.37
LDB2-214ENST00000512345 BBOX1O75936 387 aa12.75□□□□□ -0.37
LDB2-214ENST00000512345 ITGA6P23229 1130 aa12.75□□□□□ -0.37
LDB2-214ENST00000512345 SF3B3Q15393 1217 aaKnown RBP12.75□□□□□ -0.37
LDB2-214ENST00000512345 FAM161AQ3B820 660 aa12.75□□□□□ -0.37
LDB2-214ENST00000512345 CCDC152Q4G0S7 254 aa12.75□□□□□ -0.37
LDB2-214ENST00000512345 PNMA8AQ86V59 439 aaPredicted RBP12.75□□□□□ -0.37
LDB2-214ENST00000512345 SKAP1Q86WV1 359 aa12.75□□□□□ -0.37
LDB2-214ENST00000512345 NIM1KQ8IY84 436 aa12.75□□□□□ -0.37
LDB2-214ENST00000512345 PASKQ96RG2 1323 aa12.75□□□□□ -0.37
LDB2-214ENST00000512345 LRRCC1Q9C099 1032 aa12.75□□□□□ -0.37
LDB2-214ENST00000512345 LNPKQ9C0E8 428 aa12.75□□□□□ -0.37
LDB2-214ENST00000512345 FARP1Q9Y4F1 1045 aaPredicted RBP12.75□□□□□ -0.37
LDB2-214ENST00000512345 GJA3Q9Y6H8 435 aa12.75□□□□□ -0.37
LDB2-214ENST00000512345 PPIP5K2O43314 1243 aa12.74□□□□□ -0.37
LDB2-214ENST00000512345 SMARCA5O60264 1052 aaPredicted RBP12.74□□□□□ -0.37
LDB2-214ENST00000512345 ITGBL1O95965 494 aaPredicted RBP12.74□□□□□ -0.37
LDB2-214ENST00000512345 OS9Q13438 667 aaPredicted RBP12.74□□□□□ -0.37
LDB2-214ENST00000512345 DDX46Q7L014 1031 aaKnown RBP12.74□□□□□ -0.37
LDB2-214ENST00000512345 ERC1Q8IUD2 1116 aa12.74□□□□□ -0.37
LDB2-214ENST00000512345 SP8Q8IXZ3 490 aa12.74□□□□□ -0.37
LDB2-214ENST00000512345 RHPN1Q8TCX5 695 aa12.74□□□□□ -0.37
LDB2-214ENST00000512345 KIF1BPQ96EK5 621 aa12.74□□□□□ -0.37
LDB2-214ENST00000512345 ZNF594Q96JF6 807 aaPredicted RBP12.74□□□□□ -0.37
LDB2-214ENST00000512345 SIL1Q9H173 461 aa12.74□□□□□ -0.37
LDB2-214ENST00000512345 VPS33BQ9H267 617 aa12.74□□□□□ -0.37
LDB2-214ENST00000512345 RTL9Q8NET4 1388 aa12.73□□□□□ -0.37
LDB2-214ENST00000512345 PDE4AP27815 886 aa12.73□□□□□ -0.37
LDB2-214ENST00000512345 LMOD1P29536 600 aaPredicted RBP12.73□□□□□ -0.37
LDB2-214ENST00000512345 CLCN6P51797 869 aa12.73□□□□□ -0.37
LDB2-214ENST00000512345 GRAPQ13588 217 aa12.73□□□□□ -0.37
LDB2-214ENST00000512345 AOC3Q16853 763 aa12.73□□□□□ -0.37
LDB2-214ENST00000512345 TAF7LQ5H9L4 462 aa12.73□□□□□ -0.37
LDB2-214ENST00000512345 SUPT20HQ8NEM7 779 aa12.73□□□□□ -0.37
LDB2-214ENST00000512345 GRAPLQ8TC17 118 aaPredicted RBP12.73□□□□□ -0.37
LDB2-214ENST00000512345 RTFDC1Q9BY42 306 aaPredicted RBP12.73□□□□□ -0.37
LDB2-214ENST00000512345 MKRN1Q9UHC7 482 aaKnown RBP12.73□□□□□ -0.37
LDB2-214ENST00000512345 ADAMTSL1Q8N6G6 1762 aa12.72□□□□□ -0.37
LDB2-214ENST00000512345 EYA2O00167 538 aa12.72□□□□□ -0.37
LDB2-214ENST00000512345 CIAO1O76071 339 aa12.72□□□□□ -0.37
LDB2-214ENST00000512345 SASH1O94885 1247 aa12.72□□□□□ -0.37
LDB2-214ENST00000512345 HSPA1AP0DMV8 641 aaKnown RBP12.72□□□□□ -0.37
LDB2-214ENST00000512345 HSPA1BP0DMV9 641 aaKnown RBP12.72□□□□□ -0.37
LDB2-214ENST00000512345 RGS3P49796 1198 aa12.72□□□□□ -0.37
LDB2-214ENST00000512345 SCNN1DP51172 638 aa12.72□□□□□ -0.37
LDB2-214ENST00000512345 DPP8Q6V1X1 898 aaPredicted RBP12.72□□□□□ -0.37
LDB2-214ENST00000512345 CNTROBQ8N137 903 aa12.72□□□□□ -0.37
LDB2-214ENST00000512345 MPNDQ8N594 471 aa12.72□□□□□ -0.37
LDB2-214ENST00000512345 SEC31BQ9NQW1 1179 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms