RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 ZNF804AQ7Z570 1209 aa15.2■□□□□ 0.02
PCDHA4-202ENST00000512229 OSBPL3Q9H4L5 887 aa15.2■□□□□ 0.02
PCDHA4-202ENST00000512229 STAP2Q9UGK3 403 aa15.2■□□□□ 0.02
PCDHA4-202ENST00000512229 CYP27B1O15528 508 aa15.19■□□□□ 0.02
PCDHA4-202ENST00000512229 SSBP05455 408 aaKnown RBP eCLIP15.19■□□□□ 0.02
PCDHA4-202ENST00000512229 RTN1Q16799 776 aa15.19■□□□□ 0.02
PCDHA4-202ENST00000512229 CNBD1Q8NA66 436 aa15.19■□□□□ 0.02
PCDHA4-202ENST00000512229 ZBTB38Q8NAP3 1195 aaPredicted RBP15.19■□□□□ 0.02
PCDHA4-202ENST00000512229 IFIT1BQ5T764 474 aaKnown RBP15.19■□□□□ 0.02
PCDHA4-202ENST00000512229 ZHX3Q9H4I2 956 aa15.19■□□□□ 0.02
PCDHA4-202ENST00000512229 SETD1BQ9UPS6 1966 aaKnown RBP15.19■□□□□ 0.02
PCDHA4-202ENST00000512229 PCCAP05165 728 aaPredicted RBP15.19■□□□□ 0.02
PCDHA4-202ENST00000512229 CCDC96Q2M329 555 aa15.19■□□□□ 0.02
PCDHA4-202ENST00000512229 ADAMTS13Q76LX8 1427 aa15.19■□□□□ 0.02
PCDHA4-202ENST00000512229 NRXN1Q9ULB1 1477 aa15.18■□□□□ 0.02
PCDHA4-202ENST00000512229 CBFA2T2O43439 604 aa15.18■□□□□ 0.02
PCDHA4-202ENST00000512229 TAF5LO75529 589 aa15.18■□□□□ 0.02
PCDHA4-202ENST00000512229 MBD4O95243 580 aa15.18■□□□□ 0.02
PCDHA4-202ENST00000512229 ZSCAN23Q3MJ62 389 aa15.18■□□□□ 0.02
PCDHA4-202ENST00000512229 DLC1Q96QB1 1528 aa15.18■□□□□ 0.02
PCDHA4-202ENST00000512229 RPS6KB1P23443 525 aa15.18■□□□□ 0.02
PCDHA4-202ENST00000512229 HSP90AA2PQ14568 343 aaPredicted RBP15.18■□□□□ 0.02
PCDHA4-202ENST00000512229 SMARCE1Q969G3 411 aa15.18■□□□□ 0.02
PCDHA4-202ENST00000512229 CNNM3Q8NE01 707 aa15.18■□□□□ 0.02
PCDHA4-202ENST00000512229 DENND2AQ9ULE3 1009 aa15.18■□□□□ 0.02
PCDHA4-202ENST00000512229 PTCH1Q13635 1447 aa15.18■□□□□ 0.02
PCDHA4-202ENST00000512229 LOC102724428A0A0B4J2F2 783 aa15.17■□□□□ 0.02
PCDHA4-202ENST00000512229 GPAA1O43292 621 aa15.17■□□□□ 0.02
PCDHA4-202ENST00000512229 HLA-DOAP06340 250 aa15.17■□□□□ 0.02
PCDHA4-202ENST00000512229 SIK1P57059 783 aa15.17■□□□□ 0.02
PCDHA4-202ENST00000512229 GIGYF2Q6Y7W6 1299 aaKnown RBP15.17■□□□□ 0.02
PCDHA4-202ENST00000512229 ZSCAN30Q86W11 494 aa15.17■□□□□ 0.02
PCDHA4-202ENST00000512229 MNS1Q8NEH6 495 aa15.17■□□□□ 0.02
PCDHA4-202ENST00000512229 CCDC70Q6NSX1 233 aa15.17■□□□□ 0.02
PCDHA4-202ENST00000512229 PPFIBP1Q86W92 1011 aa15.17■□□□□ 0.02
PCDHA4-202ENST00000512229 USP25Q9UHP3 1055 aa15.17■□□□□ 0.02
PCDHA4-202ENST00000512229 PIK3C2BO00750 1634 aa15.17■□□□□ 0.02
PCDHA4-202ENST00000512229 MAP3K15Q6ZN16 1313 aa15.17■□□□□ 0.02
PCDHA4-202ENST00000512229 ZNF76P36508 570 aa15.17■□□□□ 0.02
PCDHA4-202ENST00000512229 ZAP70P43403 619 aa15.17■□□□□ 0.02
PCDHA4-202ENST00000512229 ZNF165P49910 485 aa15.17■□□□□ 0.02
PCDHA4-202ENST00000512229 CTSWP56202 376 aa15.17■□□□□ 0.02
PCDHA4-202ENST00000512229 VAT1LQ9HCJ6 419 aa15.17■□□□□ 0.02
PCDHA4-202ENST00000512229 PTPDC1A2A3K4 754 aa15.16■□□□□ 0.02
PCDHA4-202ENST00000512229 CFAP100Q494V2 611 aa15.16■□□□□ 0.02
PCDHA4-202ENST00000512229 GIMAP6Q6P9H5 292 aa15.16■□□□□ 0.02
PCDHA4-202ENST00000512229 MCM9Q9NXL9 1143 aa15.16■□□□□ 0.02
PCDHA4-202ENST00000512229 A0A0U1RQG5 324 aaPredicted RBP15.16■□□□□ 0.02
PCDHA4-202ENST00000512229 F8W031 263 aaPredicted RBP15.16■□□□□ 0.02
PCDHA4-202ENST00000512229 TSPY3P0CV98 308 aa15.16■□□□□ 0.02
PCDHA4-202ENST00000512229 TSPY8P0CW00 308 aa15.16■□□□□ 0.02
PCDHA4-202ENST00000512229 CCDC12Q8WUD4 166 aaPredicted RBP15.16■□□□□ 0.02
PCDHA4-202ENST00000512229 ZBTB1Q9Y2K1 713 aa15.16■□□□□ 0.02
PCDHA4-202ENST00000512229 MROH5Q6ZUA9 1318 aa15.16■□□□□ 0.02
PCDHA4-202ENST00000512229 LDHBP07195 334 aaKnown RBP15.16■□□□□ 0.02
PCDHA4-202ENST00000512229 HIBADHP31937 336 aaKnown RBP15.16■□□□□ 0.02
PCDHA4-202ENST00000512229 FBXO3Q9UK99 471 aa15.16■□□□□ 0.02
PCDHA4-202ENST00000512229 NAP1L1P55209 391 aaKnown RBP15.15■□□□□ 0.02
PCDHA4-202ENST00000512229 TM6SF1Q9BZW5 370 aa15.15■□□□□ 0.02
PCDHA4-202ENST00000512229 ANO8Q9HCE9 1232 aaPredicted RBP15.15■□□□□ 0.02
PCDHA4-202ENST00000512229 JAG2Q9Y219 1238 aa15.15■□□□□ 0.02
PCDHA4-202ENST00000512229 CDC42BPGQ6DT37 1551 aa15.15■□□□□ 0.02
PCDHA4-202ENST00000512229 IL6STP40189 918 aaPredicted RBP15.15■□□□□ 0.02
PCDHA4-202ENST00000512229 CCDC178Q5BJE1 867 aa15.15■□□□□ 0.02
PCDHA4-202ENST00000512229 LRSAM1Q6UWE0 723 aa15.15■□□□□ 0.02
PCDHA4-202ENST00000512229 KCNG4Q8TDN1 519 aa15.15■□□□□ 0.02
PCDHA4-202ENST00000512229 PANK2Q9BZ23 570 aa15.15■□□□□ 0.02
PCDHA4-202ENST00000512229 CCP110O43303 1012 aa15.15■□□□□ 0.02
PCDHA4-202ENST00000512229 LRRC24Q50LG9 513 aa15.15■□□□□ 0.02
PCDHA4-202ENST00000512229 HEG1Q9ULI3 1381 aa15.14■□□□□ 0.01
PCDHA4-202ENST00000512229 GNAQP50148 359 aa15.14■□□□□ 0.01
PCDHA4-202ENST00000512229 CCDC24Q8N4L8 307 aa15.14■□□□□ 0.01
PCDHA4-202ENST00000512229 DACT1Q9NYF0 836 aa15.14■□□□□ 0.01
PCDHA4-202ENST00000512229 ADGRB1O14514 1584 aa15.14■□□□□ 0.01
PCDHA4-202ENST00000512229 CAVIN2O95810 425 aa15.14■□□□□ 0.01
PCDHA4-202ENST00000512229 CCDC102BQ68D86 513 aa15.14■□□□□ 0.01
PCDHA4-202ENST00000512229 GOLGA6L1Q8N7Z2 621 aa15.14■□□□□ 0.01
PCDHA4-202ENST00000512229 ZNHIT6Q9NWK9 470 aaKnown RBP15.14■□□□□ 0.01
PCDHA4-202ENST00000512229 KIAA1210Q9ULL0 1709 aa15.14■□□□□ 0.01
PCDHA4-202ENST00000512229 BIN1O00499 593 aa15.14■□□□□ 0.01
PCDHA4-202ENST00000512229 PLCG2P16885 1265 aa15.14■□□□□ 0.01
PCDHA4-202ENST00000512229 KLHL10Q6JEL2 608 aa15.14■□□□□ 0.01
PCDHA4-202ENST00000512229 RAB34Q9BZG1 259 aa15.14■□□□□ 0.01
PCDHA4-202ENST00000512229 PARP3Q9Y6F1 533 aa15.14■□□□□ 0.01
PCDHA4-202ENST00000512229 RPS8P62241 208 aaKnown RBP15.13■□□□□ 0.01
PCDHA4-202ENST00000512229 PDE4CQ08493 712 aa15.13■□□□□ 0.01
PCDHA4-202ENST00000512229 UNC5CLQ8IV45 518 aa15.13■□□□□ 0.01
PCDHA4-202ENST00000512229 LRRC7Q96NW7 1537 aa15.13■□□□□ 0.01
PCDHA4-202ENST00000512229 DIP2BQ9P265 1576 aa15.13■□□□□ 0.01
PCDHA4-202ENST00000512229 A0A0D9SFI3 127 aa15.13■□□□□ 0.01
PCDHA4-202ENST00000512229 TTLL5Q6EMB2 1281 aa15.13■□□□□ 0.01
PCDHA4-202ENST00000512229 PIGBQ92521 554 aa15.13■□□□□ 0.01
PCDHA4-202ENST00000512229 ZC3H13Q5T200 1668 aaKnown RBP15.13■□□□□ 0.01
PCDHA4-202ENST00000512229 B4E1Z4 1266 aa15.13■□□□□ 0.01
PCDHA4-202ENST00000512229 DBNLQ9UJU6 430 aaKnown RBP15.13■□□□□ 0.01
PCDHA4-202ENST00000512229 VWDEQ8N2E2 1590 aa15.12■□□□□ 0.01
PCDHA4-202ENST00000512229 HAUS7Q99871 368 aa15.12■□□□□ 0.01
PCDHA4-202ENST00000512229 CABP5Q9NP86 173 aa15.12■□□□□ 0.01
PCDHA4-202ENST00000512229 PALD1Q9ULE6 856 aa15.12■□□□□ 0.01
PCDHA4-202ENST00000512229 SPATA5Q8NB90 893 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms