RNA–Protein interactions for RNA: ENST00000511831.1

YIPF3-215, Transcript of Yip1 domain family member 3, human

TSL 4

Gene YIPF3, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YIPF3-215	ENST00000511831	ZNF646	O15015	1829 aa	Predicted RBP	13.39	□□□□□ -0.27
YIPF3-215	ENST00000511831	BRCA2	P51587	3418 aa		13.38	□□□□□ -0.27
YIPF3-215	ENST00000511831	PDE8A	O60658	829 aa		13.38	□□□□□ -0.27
YIPF3-215	ENST00000511831	NF2	P35240	595 aa		13.38	□□□□□ -0.27
YIPF3-215	ENST00000511831	GOLGA2	Q08379	1002 aa		13.38	□□□□□ -0.27
YIPF3-215	ENST00000511831	NOM1	Q5C9Z4	860 aa	Known RBP	13.38	□□□□□ -0.27
YIPF3-215	ENST00000511831	SPRYD7	Q5W111	196 aa		13.38	□□□□□ -0.27
YIPF3-215	ENST00000511831	PODN	Q7Z5L7	613 aa		13.38	□□□□□ -0.27
YIPF3-215	ENST00000511831	ANGEL1	Q9UNK9	670 aa	Known RBP	13.38	□□□□□ -0.27
YIPF3-215	ENST00000511831	SPEF2	Q9C093	1822 aa		13.37	□□□□□ -0.27
YIPF3-215	ENST00000511831	PCCA	P05165	728 aa	Predicted RBP	13.37	□□□□□ -0.27
YIPF3-215	ENST00000511831	OTOP1	Q7RTM1	612 aa		13.37	□□□□□ -0.27
YIPF3-215	ENST00000511831	ARMC9	Q7Z3E5	817 aa		13.37	□□□□□ -0.27
YIPF3-215	ENST00000511831	CFHR5	Q9BXR6	569 aa		13.37	□□□□□ -0.27
YIPF3-215	ENST00000511831	MED23	Q9ULK4	1368 aa		13.36	□□□□□ -0.27
YIPF3-215	ENST00000511831	HOXB7	P09629	217 aa		13.36	□□□□□ -0.27
YIPF3-215	ENST00000511831	KLRK1	P26718	216 aa		13.36	□□□□□ -0.27
YIPF3-215	ENST00000511831	TXNRD3	Q86VQ6	643 aa		13.36	□□□□□ -0.27
YIPF3-215	ENST00000511831	CLMN	Q96JQ2	1002 aa		13.36	□□□□□ -0.27
YIPF3-215	ENST00000511831	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
YIPF3-215	ENST00000511831	ELL2	O00472	640 aa	Predicted RBP	13.35	□□□□□ -0.27
YIPF3-215	ENST00000511831	EN2	P19622	333 aa	Predicted RBP	13.35	□□□□□ -0.27
YIPF3-215	ENST00000511831	CAP1	Q01518	475 aa		13.35	□□□□□ -0.27
YIPF3-215	ENST00000511831	LDLRAD1	Q5T700	205 aa		13.35	□□□□□ -0.27
YIPF3-215	ENST00000511831	IFNL1	Q8IU54	200 aa		13.35	□□□□□ -0.27
YIPF3-215	ENST00000511831	KIAA0825	Q8IV33	1275 aa		13.35	□□□□□ -0.27
YIPF3-215	ENST00000511831	OGFOD1	Q8N543	542 aa		13.35	□□□□□ -0.27
YIPF3-215	ENST00000511831	CD99L2	Q8TCZ2	262 aa		13.35	□□□□□ -0.27
YIPF3-215	ENST00000511831	MBIP	Q9NS73	344 aa		13.35	□□□□□ -0.27
YIPF3-215	ENST00000511831	CWC25	Q9NXE8	425 aa	Predicted RBP	13.35	□□□□□ -0.27
YIPF3-215	ENST00000511831	MINPP1	Q9UNW1	487 aa		13.35	□□□□□ -0.27
YIPF3-215	ENST00000511831	PCDHAC2	Q9Y5I4	1007 aa		13.35	□□□□□ -0.27
YIPF3-215	ENST00000511831	SSC5D	A1L4H1	1573 aa		13.35	□□□□□ -0.27
YIPF3-215	ENST00000511831	CCT4	P50991	539 aa	Known RBP	13.34	□□□□□ -0.27
YIPF3-215	ENST00000511831	FXR1	P51114	621 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
YIPF3-215	ENST00000511831	CTSW	P56202	376 aa		13.34	□□□□□ -0.27
YIPF3-215	ENST00000511831	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.34	□□□□□ -0.27
YIPF3-215	ENST00000511831	CCDC191	Q8NCU4	936 aa		13.34	□□□□□ -0.27
YIPF3-215	ENST00000511831	GREM2	Q9H772	168 aa		13.34	□□□□□ -0.27
YIPF3-215	ENST00000511831	HSP90B1	P14625	803 aa	Known RBP	13.33	□□□□□ -0.28
YIPF3-215	ENST00000511831	STRIP1	Q5VSL9	837 aa		13.33	□□□□□ -0.28
YIPF3-215	ENST00000511831	WNK4	Q96J92	1243 aa		13.33	□□□□□ -0.28
YIPF3-215	ENST00000511831	CDC5L	Q99459	802 aa	Known RBP	13.33	□□□□□ -0.28
YIPF3-215	ENST00000511831	MANSC4	A6NHS7	340 aa	Predicted RBP	13.32	□□□□□ -0.28
YIPF3-215	ENST00000511831	ALDH1A1	P00352	501 aa		13.32	□□□□□ -0.28
YIPF3-215	ENST00000511831	GJA5	P36382	358 aa		13.32	□□□□□ -0.28
YIPF3-215	ENST00000511831	GTF2I	P78347	998 aa		13.32	□□□□□ -0.28
YIPF3-215	ENST00000511831	SLC10A4	Q96EP9	437 aa		13.32	□□□□□ -0.28
YIPF3-215	ENST00000511831	ZBED3	Q96IU2	234 aa	Predicted RBP	13.32	□□□□□ -0.28
YIPF3-215	ENST00000511831	METTL22	Q9BUU2	404 aa	Predicted RBP	13.32	□□□□□ -0.28
YIPF3-215	ENST00000511831	COA1	Q9GZY4	146 aa		13.32	□□□□□ -0.28
YIPF3-215	ENST00000511831	PTPN22	Q9Y2R2	807 aa		13.32	□□□□□ -0.28
YIPF3-215	ENST00000511831	AOX1	Q06278	1338 aa		13.32	□□□□□ -0.28
YIPF3-215	ENST00000511831	MYO3B	Q8WXR4	1341 aa		13.32	□□□□□ -0.28
YIPF3-215	ENST00000511831	KIAA0100	Q14667	2235 aa	Known RBP	13.32	□□□□□ -0.28
YIPF3-215	ENST00000511831	CRHR2	Q13324	411 aa		13.31	□□□□□ -0.28
YIPF3-215	ENST00000511831	INTS3	Q68E01	1043 aa	Known RBP	13.31	□□□□□ -0.28
YIPF3-215	ENST00000511831	TTLL5	Q6EMB2	1281 aa		13.31	□□□□□ -0.28
YIPF3-215	ENST00000511831	TTLL11	Q8NHH1	800 aa		13.31	□□□□□ -0.28
YIPF3-215	ENST00000511831	RUNDC1	Q96C34	613 aa		13.31	□□□□□ -0.28
YIPF3-215	ENST00000511831	DEFB129	Q9H1M3	183 aa		13.31	□□□□□ -0.28
YIPF3-215	ENST00000511831	BSDC1	Q9NW68	430 aa	Predicted RBP	13.31	□□□□□ -0.28
YIPF3-215	ENST00000511831	CLRN2	A0PK11	232 aa		13.3	□□□□□ -0.28
YIPF3-215	ENST00000511831	SNAP23	O00161	211 aa		13.3	□□□□□ -0.28
YIPF3-215	ENST00000511831	IGKV5-2	P06315	115 aa		13.3	□□□□□ -0.28
YIPF3-215	ENST00000511831	ERO1A	Q96HE7	468 aa		13.3	□□□□□ -0.28
YIPF3-215	ENST00000511831	COLQ	Q9Y215	455 aa	Predicted RBP	13.3	□□□□□ -0.28
YIPF3-215	ENST00000511831	MAP3K2	Q9Y2U5	619 aa		13.3	□□□□□ -0.28
YIPF3-215	ENST00000511831	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.3	□□□□□ -0.28
YIPF3-215	ENST00000511831		F8W031	263 aa	Predicted RBP	13.29	□□□□□ -0.28
YIPF3-215	ENST00000511831	MYC	P01106	439 aa	Predicted RBP	13.29	□□□□□ -0.28
YIPF3-215	ENST00000511831	CERS5	Q8N5B7	392 aa		13.29	□□□□□ -0.28
YIPF3-215	ENST00000511831	C8orf58	Q8NAV2	365 aa		13.29	□□□□□ -0.28
YIPF3-215	ENST00000511831	ARMC5	Q96C12	935 aa		13.29	□□□□□ -0.28
YIPF3-215	ENST00000511831	PTPN18	Q99952	460 aa		13.29	□□□□□ -0.28
YIPF3-215	ENST00000511831	EFCC1	Q9HA90	598 aa		13.29	□□□□□ -0.28
YIPF3-215	ENST00000511831	ZNF804B	A4D1E1	1349 aa		13.29	□□□□□ -0.28
YIPF3-215	ENST00000511831	COL1A1	P02452	1464 aa	Predicted RBP	13.29	□□□□□ -0.28
YIPF3-215	ENST00000511831	ZNF853	P0CG23	659 aa		13.28	□□□□□ -0.28
YIPF3-215	ENST00000511831	ZBTB48	P10074	688 aa	Predicted RBP	13.28	□□□□□ -0.28
YIPF3-215	ENST00000511831	DLGAP5	Q15398	846 aa		13.28	□□□□□ -0.28
YIPF3-215	ENST00000511831	MAP3K11	Q16584	847 aa		13.28	□□□□□ -0.28
YIPF3-215	ENST00000511831	CWF19L2	Q2TBE0	894 aa	Known RBP	13.28	□□□□□ -0.28
YIPF3-215	ENST00000511831	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.28	□□□□□ -0.28
YIPF3-215	ENST00000511831	VEZT	Q9HBM0	779 aa		13.28	□□□□□ -0.28
YIPF3-215	ENST00000511831	JAG2	Q9Y219	1238 aa		13.28	□□□□□ -0.28
YIPF3-215	ENST00000511831	LEMD3	Q9Y2U8	911 aa		13.28	□□□□□ -0.28
YIPF3-215	ENST00000511831	SZT2	Q5T011	3432 aa		13.27	□□□□□ -0.28
YIPF3-215	ENST00000511831	IGHMBP2	P38935	993 aa	Known RBP	13.27	□□□□□ -0.29
YIPF3-215	ENST00000511831	INHBE	P58166	350 aa		13.27	□□□□□ -0.29
YIPF3-215	ENST00000511831	WDR43	Q15061	677 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
YIPF3-215	ENST00000511831	ADAMTS8	Q9UP79	889 aa		13.27	□□□□□ -0.29
YIPF3-215	ENST00000511831	PI4KAP2	A4QPH2	592 aa		13.26	□□□□□ -0.29
YIPF3-215	ENST00000511831	PPP1R12B	O60237	982 aa	Predicted RBP	13.26	□□□□□ -0.29
YIPF3-215	ENST00000511831	DDX58	O95786	925 aa	Known RBP	13.26	□□□□□ -0.29
YIPF3-215	ENST00000511831	MYH3	P11055	1940 aa		13.26	□□□□□ -0.29
YIPF3-215	ENST00000511831	KCNJ4	P48050	445 aa		13.26	□□□□□ -0.29
YIPF3-215	ENST00000511831	SP3	Q02447	781 aa		13.26	□□□□□ -0.29
YIPF3-215	ENST00000511831	RALBP1	Q15311	655 aa		13.26	□□□□□ -0.29
YIPF3-215	ENST00000511831	CFAP100	Q494V2	611 aa		13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms