RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 ERC2O15083 957 aa9.81□□□□□ -0.84
SMAD1-209ENST00000511125 MCAMP43121 646 aa9.81□□□□□ -0.84
SMAD1-209ENST00000511125 DPP8Q6V1X1 898 aaPredicted RBP9.81□□□□□ -0.84
SMAD1-209ENST00000511125 SEC62Q99442 399 aaKnown RBP9.81□□□□□ -0.84
SMAD1-209ENST00000511125 MXD3Q9BW11 206 aa9.81□□□□□ -0.84
SMAD1-209ENST00000511125 FHDC1Q9C0D6 1143 aaPredicted RBP9.81□□□□□ -0.84
SMAD1-209ENST00000511125 DBNDD1Q9H9R9 158 aa9.81□□□□□ -0.84
SMAD1-209ENST00000511125 SPEF2Q9C093 1822 aa9.81□□□□□ -0.84
SMAD1-209ENST00000511125 SALL3Q9BXA9 1300 aa9.81□□□□□ -0.84
SMAD1-209ENST00000511125 GLRX3O76003 335 aaKnown RBP9.81□□□□□ -0.84
SMAD1-209ENST00000511125 ALDH1B1P30837 517 aa9.81□□□□□ -0.84
SMAD1-209ENST00000511125 MPNDQ8N594 471 aa9.81□□□□□ -0.84
SMAD1-209ENST00000511125 IL25Q9H293 177 aa9.81□□□□□ -0.84
SMAD1-209ENST00000511125 BBOX1O75936 387 aa9.8□□□□□ -0.84
SMAD1-209ENST00000511125 FAM84BQ96KN1 310 aaPredicted RBP9.8□□□□□ -0.84
SMAD1-209ENST00000511125 FAM227BQ96M60 508 aa9.8□□□□□ -0.84
SMAD1-209ENST00000511125 GGA1Q9UJY5 639 aa9.8□□□□□ -0.84
SMAD1-209ENST00000511125 N4BP2Q86UW6 1770 aaPredicted RBP9.8□□□□□ -0.84
SMAD1-209ENST00000511125 RASGRF1Q13972 1273 aa9.8□□□□□ -0.84
SMAD1-209ENST00000511125 CAVIN4Q5BKX8 364 aa9.8□□□□□ -0.84
SMAD1-209ENST00000511125 CCDC129Q6ZRS4 1044 aa9.8□□□□□ -0.84
SMAD1-209ENST00000511125 TTLL6Q8N841 843 aa9.8□□□□□ -0.84
SMAD1-209ENST00000511125 TBC1D16Q8TBP0 767 aa9.8□□□□□ -0.84
SMAD1-209ENST00000511125 ZNF277Q9NRM2 450 aaPredicted RBP9.8□□□□□ -0.84
SMAD1-209ENST00000511125 MYH3P11055 1940 aa9.79□□□□□ -0.84
SMAD1-209ENST00000511125 KCNA3P22001 575 aa9.79□□□□□ -0.84
SMAD1-209ENST00000511125 BMP2KLQ5H9B9 411 aa9.79□□□□□ -0.84
SMAD1-209ENST00000511125 STK11IPQ8N1F8 1099 aa9.79□□□□□ -0.84
SMAD1-209ENST00000511125 CRAMP1Q96RY5 1269 aa9.79□□□□□ -0.84
SMAD1-209ENST00000511125 BACH2Q9BYV9 841 aa9.79□□□□□ -0.84
SMAD1-209ENST00000511125 RGL2O15211 777 aa9.79□□□□□ -0.84
SMAD1-209ENST00000511125 FGFR2P21802 821 aa9.79□□□□□ -0.84
SMAD1-209ENST00000511125 HOXA10P31260 410 aaPredicted RBP9.79□□□□□ -0.84
SMAD1-209ENST00000511125 HIBADHP31937 336 aaKnown RBP9.79□□□□□ -0.84
SMAD1-209ENST00000511125 AOC3Q16853 763 aa9.79□□□□□ -0.84
SMAD1-209ENST00000511125 CNTROBQ8N137 903 aa9.79□□□□□ -0.84
SMAD1-209ENST00000511125 ZC3H12CQ9C0D7 883 aaKnown RBP9.79□□□□□ -0.84
SMAD1-209ENST00000511125 PAG1Q9NWQ8 432 aa9.79□□□□□ -0.84
SMAD1-209ENST00000511125 HMG20BQ9P0W2 317 aa9.79□□□□□ -0.84
SMAD1-209ENST00000511125 STAP2Q9UGK3 403 aa9.79□□□□□ -0.84
SMAD1-209ENST00000511125 ATP6V0A2Q9Y487 856 aa9.79□□□□□ -0.84
SMAD1-209ENST00000511125 SLC4A8Q2Y0W8 1093 aa9.78□□□□□ -0.84
SMAD1-209ENST00000511125 ANKRD2Q9GZV1 360 aa9.78□□□□□ -0.84
SMAD1-209ENST00000511125 DIAPH3Q9NSV4 1193 aa9.78□□□□□ -0.84
SMAD1-209ENST00000511125 XDHP47989 1333 aa9.78□□□□□ -0.84
SMAD1-209ENST00000511125 ZNF609O15014 1411 aa9.78□□□□□ -0.84
SMAD1-209ENST00000511125 CYP2E1P05181 493 aaPredicted RBP9.78□□□□□ -0.84
SMAD1-209ENST00000511125 ATP5JP18859 108 aa9.78□□□□□ -0.84
SMAD1-209ENST00000511125 CNKSR1Q969H4 720 aa9.78□□□□□ -0.84
SMAD1-209ENST00000511125 ANO2Q9NQ90 1003 aa9.78□□□□□ -0.84
SMAD1-209ENST00000511125 PIH1D3Q9NQM4 214 aaKnown RBP9.78□□□□□ -0.84
SMAD1-209ENST00000511125 RAI14Q9P0K7 980 aa9.78□□□□□ -0.84
SMAD1-209ENST00000511125 PIM2Q9P1W9 311 aa9.78□□□□□ -0.84
SMAD1-209ENST00000511125 LRP2BPQ9P2M1 347 aa9.78□□□□□ -0.84
SMAD1-209ENST00000511125 SPATA5Q8NB90 893 aa9.78□□□□□ -0.84
SMAD1-209ENST00000511125 KLRG2A4D1S0 409 aaPredicted RBP9.77□□□□□ -0.85
SMAD1-209ENST00000511125 CDC45O75419 566 aa9.77□□□□□ -0.85
SMAD1-209ENST00000511125 GTF2IP78347 998 aa9.77□□□□□ -0.85
SMAD1-209ENST00000511125 NMIQ13287 307 aaPredicted RBP9.77□□□□□ -0.85
SMAD1-209ENST00000511125 GRIK5Q16478 980 aa9.77□□□□□ -0.85
SMAD1-209ENST00000511125 SP8Q8IXZ3 490 aa9.77□□□□□ -0.85
SMAD1-209ENST00000511125 MIGA1Q8NAN2 632 aa9.77□□□□□ -0.85
SMAD1-209ENST00000511125 TTC41PQ6P2S7 1318 aa9.77□□□□□ -0.85
SMAD1-209ENST00000511125 UBE4AQ14139 1066 aa9.77□□□□□ -0.85
SMAD1-209ENST00000511125 DALRD3Q5D0E6 543 aaKnown RBP9.77□□□□□ -0.85
SMAD1-209ENST00000511125 SGIP1Q9BQI5 828 aa9.77□□□□□ -0.85
SMAD1-209ENST00000511125 OSBPL3Q9H4L5 887 aa9.77□□□□□ -0.85
SMAD1-209ENST00000511125 CHMLP26374 656 aa9.76□□□□□ -0.85
SMAD1-209ENST00000511125 RASSF7Q02833 373 aa9.76□□□□□ -0.85
SMAD1-209ENST00000511125 SLC9C2Q5TAH2 1124 aa9.76□□□□□ -0.85
SMAD1-209ENST00000511125 HAUS7Q99871 368 aa9.76□□□□□ -0.85
SMAD1-209ENST00000511125 FBXO3Q9UK99 471 aa9.76□□□□□ -0.85
SMAD1-209ENST00000511125 LAMB2P55268 1798 aa9.76□□□□□ -0.85
SMAD1-209ENST00000511125 RTL9Q8NET4 1388 aa9.76□□□□□ -0.85
SMAD1-209ENST00000511125 A0A0D9SFI3 127 aa9.76□□□□□ -0.85
SMAD1-209ENST00000511125 PPIP5K2O43314 1243 aa9.76□□□□□ -0.85
SMAD1-209ENST00000511125 GPR108Q9NPR9 543 aa9.76□□□□□ -0.85
SMAD1-209ENST00000511125 RBM19Q9Y4C8 960 aaKnown RBP9.76□□□□□ -0.85
SMAD1-209ENST00000511125 CACNA1SQ13698 1873 aa9.76□□□□□ -0.85
SMAD1-209ENST00000511125 RAD17O75943 681 aa9.76□□□□□ -0.85
SMAD1-209ENST00000511125 PRDX5P30044 214 aa9.76□□□□□ -0.85
SMAD1-209ENST00000511125 ARHGAP27Q6ZUM4 889 aa9.76□□□□□ -0.85
SMAD1-209ENST00000511125 MAGEB6Q8N7X4 407 aa9.76□□□□□ -0.85
SMAD1-209ENST00000511125 EVI5LQ96CN4 794 aa9.76□□□□□ -0.85
SMAD1-209ENST00000511125 ANKRD31Q8N7Z5 1873 aa9.76□□□□□ -0.85
SMAD1-209ENST00000511125 SLX4Q8IY92 1834 aa9.75□□□□□ -0.85
SMAD1-209ENST00000511125 STYK1Q6J9G0 422 aa9.75□□□□□ -0.85
SMAD1-209ENST00000511125 GNL3LQ9NVN8 582 aaKnown RBP9.75□□□□□ -0.85
SMAD1-209ENST00000511125 COL24A1Q17RW2 1714 aa9.75□□□□□ -0.85
SMAD1-209ENST00000511125 ATP2B4P23634 1241 aa9.75□□□□□ -0.85
SMAD1-209ENST00000511125 CASC1Q6TDU7 716 aa9.75□□□□□ -0.85
SMAD1-209ENST00000511125 ZNF589Q86UQ0 364 aaPredicted RBP9.75□□□□□ -0.85
SMAD1-209ENST00000511125 SYT17Q9BSW7 474 aa9.75□□□□□ -0.85
SMAD1-209ENST00000511125 CD209Q9NNX6 404 aa9.75□□□□□ -0.85
SMAD1-209ENST00000511125 SCNN1DP51172 638 aa9.74□□□□□ -0.85
SMAD1-209ENST00000511125 DIXDC1Q155Q3 683 aa9.74□□□□□ -0.85
SMAD1-209ENST00000511125 LARGE2Q8N3Y3 721 aa9.74□□□□□ -0.85
SMAD1-209ENST00000511125 SCAF8Q9UPN6 1271 aaKnown RBP9.74□□□□□ -0.85
SMAD1-209ENST00000511125 LEMD3Q9Y2U8 911 aa9.74□□□□□ -0.85
SMAD1-209ENST00000511125 APPP05067 770 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms