RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 KCNQ4P56696 695 aa7.18□□□□□ -1.26
MBD4-209ENST00000511009 SFSWAPQ12872 951 aaKnown RBP7.18□□□□□ -1.26
MBD4-209ENST00000511009 CCINQ13939 588 aa7.18□□□□□ -1.26
MBD4-209ENST00000511009 ZNF394Q53GI3 561 aa7.18□□□□□ -1.26
MBD4-209ENST00000511009 BEND7Q8N7W2 519 aaPredicted RBP7.18□□□□□ -1.26
MBD4-209ENST00000511009 SLC43A3Q8NBI5 491 aa7.18□□□□□ -1.26
MBD4-209ENST00000511009 DCAF5Q96JK2 942 aa7.18□□□□□ -1.26
MBD4-209ENST00000511009 BTBD6Q96KE9 485 aa7.18□□□□□ -1.26
MBD4-209ENST00000511009 PNMA5Q96PV4 448 aa7.18□□□□□ -1.26
MBD4-209ENST00000511009 EHD4Q9H223 541 aa7.18□□□□□ -1.26
MBD4-209ENST00000511009 MARK1Q9P0L2 795 aa7.18□□□□□ -1.26
MBD4-209ENST00000511009 KANSL3Q9P2N6 904 aa7.18□□□□□ -1.26
MBD4-209ENST00000511009 TRAK1Q9UPV9 953 aa7.18□□□□□ -1.26
MBD4-209ENST00000511009 PCDHGB7Q9Y5F8 929 aa7.18□□□□□ -1.26
MBD4-209ENST00000511009 RARAP10276 462 aa7.17□□□□□ -1.26
MBD4-209ENST00000511009 COL8A1P27658 744 aa7.17□□□□□ -1.26
MBD4-209ENST00000511009 TNNI2P48788 182 aa7.17□□□□□ -1.26
MBD4-209ENST00000511009 ST13P50502 369 aaKnown RBP7.17□□□□□ -1.26
MBD4-209ENST00000511009 PTPN12Q05209 780 aaKnown RBP7.17□□□□□ -1.26
MBD4-209ENST00000511009 SLC30A3Q99726 388 aa7.17□□□□□ -1.26
MBD4-209ENST00000511009 PRKAG2Q9UGJ0 569 aa7.17□□□□□ -1.26
MBD4-209ENST00000511009 DDX41Q9UJV9 622 aaKnown RBP7.17□□□□□ -1.26
MBD4-209ENST00000511009 TTF2Q9UNY4 1162 aaKnown RBP7.17□□□□□ -1.26
MBD4-209ENST00000511009 ATP2B1P20020 1258 aa7.16□□□□□ -1.26
MBD4-209ENST00000511009 ADH6P28332 368 aa7.16□□□□□ -1.26
MBD4-209ENST00000511009 DNAJA1P31689 397 aaKnown RBP7.16□□□□□ -1.26
MBD4-209ENST00000511009 GRM2Q14416 872 aa7.16□□□□□ -1.26
MBD4-209ENST00000511009 VPS37DQ86XT2 251 aa7.16□□□□□ -1.26
MBD4-209ENST00000511009 CYP2E1P05181 493 aaPredicted RBP7.15□□□□□ -1.26
MBD4-209ENST00000511009 TARSP26639 723 aaKnown RBP7.15□□□□□ -1.26
MBD4-209ENST00000511009 PCBP4P57723 403 aaKnown RBP7.15□□□□□ -1.26
MBD4-209ENST00000511009 KIAA0319Q5VV43 1072 aa7.15□□□□□ -1.26
MBD4-209ENST00000511009 A0A1W2PP55 124 aa7.14□□□□□ -1.27
MBD4-209ENST00000511009 MMP20O60882 483 aa7.14□□□□□ -1.27
MBD4-209ENST00000511009 PSAPP07602 524 aa7.14□□□□□ -1.27
MBD4-209ENST00000511009 FCGRTP55899 365 aa7.14□□□□□ -1.27
MBD4-209ENST00000511009 RACK1P63244 317 aaKnown RBP7.14□□□□□ -1.27
MBD4-209ENST00000511009 ARID5AQ03989 594 aa7.14□□□□□ -1.27
MBD4-209ENST00000511009 CHSY3Q70JA7 882 aa7.14□□□□□ -1.27
MBD4-209ENST00000511009 NCAPG2Q86XI2 1143 aa7.14□□□□□ -1.27
MBD4-209ENST00000511009 OR13H1Q8NG92 308 aa7.14□□□□□ -1.27
MBD4-209ENST00000511009 GSX2Q9BZM3 304 aa7.14□□□□□ -1.27
MBD4-209ENST00000511009 LATS2Q9NRM7 1088 aa7.14□□□□□ -1.27
MBD4-209ENST00000511009 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.14□□□□□ -1.27
MBD4-209ENST00000511009 ADARB2-AS1A8MUL3 147 aa7.13□□□□□ -1.27
MBD4-209ENST00000511009 SIN3BO75182 1162 aa7.13□□□□□ -1.27
MBD4-209ENST00000511009 NFKB1P19838 968 aa7.13□□□□□ -1.27
MBD4-209ENST00000511009 GTF2F1P35269 517 aaKnown RBP eCLIP7.13□□□□□ -1.27
MBD4-209ENST00000511009 HYAL2Q12891 473 aa7.13□□□□□ -1.27
MBD4-209ENST00000511009 COL9A3Q14050 684 aaPredicted RBP7.13□□□□□ -1.27
MBD4-209ENST00000511009 PLA2G4EQ3MJ16 856 aa7.13□□□□□ -1.27
MBD4-209ENST00000511009 DTHD1Q6ZMT9 781 aa7.13□□□□□ -1.27
MBD4-209ENST00000511009 SYT9Q86SS6 491 aa7.13□□□□□ -1.27
MBD4-209ENST00000511009 LIN7BQ9HAP6 207 aa7.13□□□□□ -1.27
MBD4-209ENST00000511009 AKAP2Q9Y2D5 859 aa7.13□□□□□ -1.27
MBD4-209ENST00000511009 KRBA1A5PL33 1030 aa7.12□□□□□ -1.27
MBD4-209ENST00000511009 CCDC85BQ15834 202 aaPredicted RBP7.12□□□□□ -1.27
MBD4-209ENST00000511009 RELL1Q8IUW5 271 aa7.12□□□□□ -1.27
MBD4-209ENST00000511009 DHX38Q92620 1227 aaKnown RBP7.12□□□□□ -1.27
MBD4-209ENST00000511009 TNFRSF25Q93038 417 aa7.12□□□□□ -1.27
MBD4-209ENST00000511009 DNAJC2Q99543 621 aaKnown RBP7.12□□□□□ -1.27
MBD4-209ENST00000511009 NOC4LQ9BVI4 516 aaKnown RBP7.12□□□□□ -1.27
MBD4-209ENST00000511009 SRA1Q9HD15 236 aaKnown RBP7.12□□□□□ -1.27
MBD4-209ENST00000511009 SALL4Q9UJQ4 1053 aa7.12□□□□□ -1.27
MBD4-209ENST00000511009 MKL2Q9ULH7 1088 aa7.12□□□□□ -1.27
MBD4-209ENST00000511009 STARD13Q9Y3M8 1113 aa7.12□□□□□ -1.27
MBD4-209ENST00000511009 ELOA3CA0A087WX78 387 aaPredicted RBP7.11□□□□□ -1.27
MBD4-209ENST00000511009 ELOA3DA6NLF2 546 aaPredicted RBP7.11□□□□□ -1.27
MBD4-209ENST00000511009 PROCP04070 461 aa7.11□□□□□ -1.27
MBD4-209ENST00000511009 XRCC5P13010 732 aaKnown RBP7.11□□□□□ -1.27
MBD4-209ENST00000511009 PLAURQ03405 335 aa7.11□□□□□ -1.27
MBD4-209ENST00000511009 SPEM2Q0P670 501 aa7.11□□□□□ -1.27
MBD4-209ENST00000511009 NEUROD1Q13562 356 aa7.11□□□□□ -1.27
MBD4-209ENST00000511009 PWP1Q13610 501 aa7.11□□□□□ -1.27
MBD4-209ENST00000511009 ELOA3BQ3SY89 546 aa7.11□□□□□ -1.27
MBD4-209ENST00000511009 PEAR1Q5VY43 1037 aaPredicted RBP7.11□□□□□ -1.27
MBD4-209ENST00000511009 ERMP1Q7Z2K6 904 aa7.11□□□□□ -1.27
MBD4-209ENST00000511009 PODNQ7Z5L7 613 aa7.11□□□□□ -1.27
MBD4-209ENST00000511009 GLIS3Q8NEA6 775 aa7.11□□□□□ -1.27
MBD4-209ENST00000511009 ELOA3Q8NG57 546 aa7.11□□□□□ -1.27
MBD4-209ENST00000511009 BHMTQ93088 406 aa7.11□□□□□ -1.27
MBD4-209ENST00000511009 SPACA7Q96KW9 195 aa7.11□□□□□ -1.27
MBD4-209ENST00000511009 EFCC1Q9HA90 598 aa7.11□□□□□ -1.27
MBD4-209ENST00000511009 TLR7Q9NYK1 1049 aaKnown RBP7.11□□□□□ -1.27
MBD4-209ENST00000511009 TMEM238LA0A1B0GVL6 79 aa7.1□□□□□ -1.27
MBD4-209ENST00000511009 SOX18P35713 384 aa7.1□□□□□ -1.27
MBD4-209ENST00000511009 PAK2Q13177 524 aa7.1□□□□□ -1.27
MBD4-209ENST00000511009 PRPF40BQ6NWY9 871 aaKnown RBP7.1□□□□□ -1.27
MBD4-209ENST00000511009 TRIM11Q96F44 468 aa7.1□□□□□ -1.27
MBD4-209ENST00000511009 GMLQ99445 158 aa7.1□□□□□ -1.27
MBD4-209ENST00000511009 OSMRQ99650 979 aa7.1□□□□□ -1.27
MBD4-209ENST00000511009 ZFYVE1Q9HBF4 777 aa7.1□□□□□ -1.27
MBD4-209ENST00000511009 COPRSQ9NQ92 184 aa7.1□□□□□ -1.27
MBD4-209ENST00000511009 KBTBD4Q9NVX7 518 aa7.1□□□□□ -1.27
MBD4-209ENST00000511009 ZFATQ9P243 1243 aa7.1□□□□□ -1.27
MBD4-209ENST00000511009 PPM1HQ9ULR3 514 aa7.1□□□□□ -1.27
MBD4-209ENST00000511009 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.1□□□□□ -1.27
MBD4-209ENST00000511009 IGHA1P01876 353 aa7.09□□□□□ -1.27
MBD4-209ENST00000511009 RAB44Q7Z6P3 723 aaPredicted RBP7.09□□□□□ -1.27
MBD4-209ENST00000511009 C3orf58Q8NDZ4 430 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms