RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 G2E3Q7L622 706 aa14.93□□□□□ -0.02
LIN54-210ENST00000510877 RPAP2Q8IXW5 612 aaPredicted RBP14.93□□□□□ -0.02
LIN54-210ENST00000510877 APLP1P51693 650 aa14.93□□□□□ -0.02
LIN54-210ENST00000510877 VAMP4O75379 141 aa14.93□□□□□ -0.02
LIN54-210ENST00000510877 SRGNP10124 158 aa14.93□□□□□ -0.02
LIN54-210ENST00000510877 CCDC184Q52MB2 194 aa14.93□□□□□ -0.02
LIN54-210ENST00000510877 DNTTIP2Q5QJE6 756 aaKnown RBP14.93□□□□□ -0.02
LIN54-210ENST00000510877 CPLX2Q6PUV4 134 aaKnown RBP14.93□□□□□ -0.02
LIN54-210ENST00000510877 APOBEC3FQ8IUX4 373 aaKnown RBP14.93□□□□□ -0.02
LIN54-210ENST00000510877 CHMP4CQ96CF2 233 aa14.93□□□□□ -0.02
LIN54-210ENST00000510877 XRN1Q8IZH2 1706 aaKnown RBP14.93□□□□□ -0.02
LIN54-210ENST00000510877 PODXL2Q9NZ53 605 aa14.93□□□□□ -0.02
LIN54-210ENST00000510877 DDR1Q08345 913 aa14.92□□□□□ -0.02
LIN54-210ENST00000510877 CNTROBQ8N137 903 aa14.92□□□□□ -0.02
LIN54-210ENST00000510877 TTC6Q86TZ1 520 aa14.92□□□□□ -0.02
LIN54-210ENST00000510877 LPIN2Q92539 896 aa14.92□□□□□ -0.02
LIN54-210ENST00000510877 ZBED9Q6R2W3 1325 aa14.92□□□□□ -0.02
LIN54-210ENST00000510877 GLTPD2A6NH11 291 aa14.92□□□□□ -0.02
LIN54-210ENST00000510877 BICC1Q9H694 974 aaKnown RBP14.92□□□□□ -0.02
LIN54-210ENST00000510877 GLRX3O76003 335 aaKnown RBP14.91□□□□□ -0.02
LIN54-210ENST00000510877 USP40Q9NVE5 1235 aa14.91□□□□□ -0.02
LIN54-210ENST00000510877 GPR101Q96P66 508 aaPredicted RBP14.91□□□□□ -0.02
LIN54-210ENST00000510877 GADL1Q6ZQY3 521 aa14.91□□□□□ -0.02
LIN54-210ENST00000510877 COL16A1Q07092 1604 aaPredicted RBP14.91□□□□□ -0.02
LIN54-210ENST00000510877 UBE4AQ14139 1066 aa14.91□□□□□ -0.02
LIN54-210ENST00000510877 ZNF784Q8NCA9 323 aaPredicted RBP14.91□□□□□ -0.02
LIN54-210ENST00000510877 NBPF26B4DH59 902 aa14.9□□□□□ -0.02
LIN54-210ENST00000510877 GYG1P46976 350 aa14.9□□□□□ -0.02
LIN54-210ENST00000510877 NBPF10Q6P3W6 841 aaKnown RBP14.9□□□□□ -0.02
LIN54-210ENST00000510877 TMEM57Q8N5G2 664 aa14.9□□□□□ -0.02
LIN54-210ENST00000510877 NBPF15Q8N660 670 aa14.9□□□□□ -0.02
LIN54-210ENST00000510877 BOLA2Q9H3K6 86 aa14.9□□□□□ -0.02
LIN54-210ENST00000510877 TRIM35Q9UPQ4 493 aa14.9□□□□□ -0.02
LIN54-210ENST00000510877 FMNL1O95466 1100 aaPredicted RBP14.9□□□□□ -0.02
LIN54-210ENST00000510877 PDE3AQ14432 1141 aa14.9□□□□□ -0.02
LIN54-210ENST00000510877 CCDC96Q2M329 555 aa14.9□□□□□ -0.02
LIN54-210ENST00000510877 CELF1Q92879 486 aaKnown RBP14.9□□□□□ -0.02
LIN54-210ENST00000510877 MPHOSPH6Q99547 160 aaKnown RBP14.9□□□□□ -0.02
LIN54-210ENST00000510877 PTMAP06454 111 aaKnown RBP14.9□□□□□ -0.02
LIN54-210ENST00000510877 NAPBQ9H115 298 aa14.9□□□□□ -0.02
LIN54-210ENST00000510877 RPS12P25398 132 aaKnown RBP14.89□□□□□ -0.03
LIN54-210ENST00000510877 LDHDQ86WU2 507 aa14.89□□□□□ -0.03
LIN54-210ENST00000510877 ZBTB12Q9Y330 459 aaPredicted RBP14.89□□□□□ -0.03
LIN54-210ENST00000510877 AS3MTQ9HBK9 375 aa14.89□□□□□ -0.03
LIN54-210ENST00000510877 GGA3Q9NZ52 723 aa14.89□□□□□ -0.03
LIN54-210ENST00000510877 PLEKHG2Q9H7P9 1386 aa14.89□□□□□ -0.03
LIN54-210ENST00000510877 SASH1O94885 1247 aa14.89□□□□□ -0.03
LIN54-210ENST00000510877 HOXD10P28358 340 aa14.89□□□□□ -0.03
LIN54-210ENST00000510877 SH2D4AQ9H788 454 aa14.89□□□□□ -0.03
LIN54-210ENST00000510877 CCDC85CA6NKD9 419 aa14.88□□□□□ -0.03
LIN54-210ENST00000510877 RAB11FIP3O75154 756 aa14.88□□□□□ -0.03
LIN54-210ENST00000510877 ZKSCAN1P17029 563 aaPredicted RBP14.88□□□□□ -0.03
LIN54-210ENST00000510877 MSNP26038 577 aaKnown RBP14.88□□□□□ -0.03
LIN54-210ENST00000510877 BSDC1Q9NW68 430 aaPredicted RBP14.88□□□□□ -0.03
LIN54-210ENST00000510877 FMN2Q9NZ56 1722 aa14.88□□□□□ -0.03
LIN54-210ENST00000510877 NALCNQ8IZF0 1738 aa14.88□□□□□ -0.03
LIN54-210ENST00000510877 RNF20Q5VTR2 975 aa14.88□□□□□ -0.03
LIN54-210ENST00000510877 GPC2Q8N158 579 aa14.88□□□□□ -0.03
LIN54-210ENST00000510877 CCDC43Q96MW1 224 aaKnown RBP14.88□□□□□ -0.03
LIN54-210ENST00000510877 GBA2Q9HCG7 927 aaPredicted RBP14.87□□□□□ -0.03
LIN54-210ENST00000510877 BCAMP50895 628 aa14.87□□□□□ -0.03
LIN54-210ENST00000510877 CCDC102AQ96A19 550 aa14.87□□□□□ -0.03
LIN54-210ENST00000510877 HIP1O00291 1037 aa14.87□□□□□ -0.03
LIN54-210ENST00000510877 GOLIM4O00461 696 aa14.87□□□□□ -0.03
LIN54-210ENST00000510877 RARSP54136 660 aaKnown RBP14.87□□□□□ -0.03
LIN54-210ENST00000510877 RAB3GAP1Q15042 981 aa14.87□□□□□ -0.03
LIN54-210ENST00000510877 PA2G4Q9UQ80 394 aaKnown RBP14.87□□□□□ -0.03
LIN54-210ENST00000510877 IPO9Q96P70 1041 aaKnown RBP14.87□□□□□ -0.03
LIN54-210ENST00000510877 LNPKQ9C0E8 428 aa14.87□□□□□ -0.03
LIN54-210ENST00000510877 SREBF2Q12772 1141 aa14.86□□□□□ -0.03
LIN54-210ENST00000510877 TNS4Q8IZW8 715 aa14.86□□□□□ -0.03
LIN54-210ENST00000510877 ABCC4O15439 1325 aa14.86□□□□□ -0.03
LIN54-210ENST00000510877 CFAP100Q494V2 611 aa14.86□□□□□ -0.03
LIN54-210ENST00000510877 ANGEL2Q5VTE6 544 aaKnown RBP14.86□□□□□ -0.03
LIN54-210ENST00000510877 TMEM88BA6NKF7 163 aa14.86□□□□□ -0.03
LIN54-210ENST00000510877 SLC5A4Q9NY91 659 aa14.86□□□□□ -0.03
LIN54-210ENST00000510877 MAP2K1Q02750 393 aaPredicted RBP14.85□□□□□ -0.03
LIN54-210ENST00000510877 SAMD7Q7Z3H4 446 aa14.85□□□□□ -0.03
LIN54-210ENST00000510877 PRKAG2Q9UGJ0 569 aa14.85□□□□□ -0.03
LIN54-210ENST00000510877 C1QTNF8P60827 252 aa14.85□□□□□ -0.03
LIN54-210ENST00000510877 GPSM2P81274 684 aa14.85□□□□□ -0.03
LIN54-210ENST00000510877 UBAC1Q9BSL1 405 aa14.85□□□□□ -0.03
LIN54-210ENST00000510877 PDE4BQ07343 736 aa14.85□□□□□ -0.03
LIN54-210ENST00000510877 MEIS3Q99687 375 aa14.85□□□□□ -0.03
LIN54-210ENST00000510877 PPP4R3BQ5MIZ7 849 aa14.85□□□□□ -0.03
LIN54-210ENST00000510877 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.85□□□□□ -0.03
LIN54-210ENST00000510877 MCM9Q9NXL9 1143 aa14.85□□□□□ -0.03
LIN54-210ENST00000510877 RANBP6O60518 1105 aaKnown RBP14.84□□□□□ -0.03
LIN54-210ENST00000510877 TIMM10P62072 90 aa14.84□□□□□ -0.03
LIN54-210ENST00000510877 CERS3Q8IU89 383 aa14.84□□□□□ -0.03
LIN54-210ENST00000510877 ZYXQ15942 572 aaKnown RBP14.84□□□□□ -0.03
LIN54-210ENST00000510877 SUCLG2Q96I99 432 aa14.84□□□□□ -0.03
LIN54-210ENST00000510877 PSMD14O00487 310 aa14.84□□□□□ -0.03
LIN54-210ENST00000510877 CPLX1O14810 134 aa14.84□□□□□ -0.03
LIN54-210ENST00000510877 ZNF34Q8IZ26 560 aa14.84□□□□□ -0.03
LIN54-210ENST00000510877 PAGR1Q9BTK6 254 aa14.84□□□□□ -0.03
LIN54-210ENST00000510877 KDRP35968 1356 aa14.83□□□□□ -0.03
LIN54-210ENST00000510877 CNGA1P29973 690 aa14.83□□□□□ -0.04
LIN54-210ENST00000510877 USP50Q70EL3 339 aaPredicted RBP14.83□□□□□ -0.04
LIN54-210ENST00000510877 MRPL50Q8N5N7 158 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms