RNA–Protein interactions for RNA: ENST00000510362.5

RETREG1-206, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best)

Gene RETREG1, Length 1,054 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-206ENST00000510362 NR3C2P08235 984 aa12.11□□□□□ -0.47
RETREG1-206ENST00000510362 HSP90AB1P08238 724 aaKnown RBP12.11□□□□□ -0.47
RETREG1-206ENST00000510362 HMGB2P26583 209 aaKnown RBP12.11□□□□□ -0.47
RETREG1-206ENST00000510362 PLEKHM2Q8IWE5 1019 aa12.11□□□□□ -0.47
RETREG1-206ENST00000510362 PCDHB11Q9Y5F2 797 aa12.11□□□□□ -0.47
RETREG1-206ENST00000510362 QSER1Q2KHR3 1735 aa12.11□□□□□ -0.47
RETREG1-206ENST00000510362 J3QL48 77 aa12.1□□□□□ -0.47
RETREG1-206ENST00000510362 NCOA4Q13772 614 aa12.1□□□□□ -0.47
RETREG1-206ENST00000510362 CCDC116Q8IYX3 515 aa12.1□□□□□ -0.47
RETREG1-206ENST00000510362 STK32BQ9NY57 414 aa12.1□□□□□ -0.47
RETREG1-206ENST00000510362 WASF2Q9Y6W5 498 aa12.1□□□□□ -0.47
RETREG1-206ENST00000510362 CASZ1Q86V15 1759 aa12.1□□□□□ -0.47
RETREG1-206ENST00000510362 C5P01031 1676 aa12.1□□□□□ -0.47
RETREG1-206ENST00000510362 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.09□□□□□ -0.47
RETREG1-206ENST00000510362 PPP2R1AP30153 589 aa12.09□□□□□ -0.47
RETREG1-206ENST00000510362 NNTQ13423 1086 aa12.09□□□□□ -0.47
RETREG1-206ENST00000510362 C1orf141Q5JVX7 400 aa12.09□□□□□ -0.47
RETREG1-206ENST00000510362 AEBP1Q8IUX7 1158 aa12.09□□□□□ -0.47
RETREG1-206ENST00000510362 SRCAPQ6ZRS2 3230 aa12.09□□□□□ -0.47
RETREG1-206ENST00000510362 SCN11AQ9UI33 1791 aa12.09□□□□□ -0.47
RETREG1-206ENST00000510362 VIRMAQ69YN4 1812 aaKnown RBP12.09□□□□□ -0.47
RETREG1-206ENST00000510362 OXLD1Q5BKU9 147 aa12.08□□□□□ -0.48
RETREG1-206ENST00000510362 ZNF530Q6P9A1 599 aaPredicted RBP12.08□□□□□ -0.48
RETREG1-206ENST00000510362 MPRIPQ6WCQ1 1025 aa12.08□□□□□ -0.48
RETREG1-206ENST00000510362 SMARCC1Q92922 1105 aaPredicted RBP12.08□□□□□ -0.48
RETREG1-206ENST00000510362 DCAF5Q96JK2 942 aa12.08□□□□□ -0.48
RETREG1-206ENST00000510362 TMPRSS4Q9NRS4 437 aa12.08□□□□□ -0.48
RETREG1-206ENST00000510362 TAF1LQ8IZX4 1826 aa12.08□□□□□ -0.48
RETREG1-206ENST00000510362 PALLDQ8WX93 1383 aa12.07□□□□□ -0.48
RETREG1-206ENST00000510362 U2SURPO15042 1029 aaKnown RBP12.07□□□□□ -0.48
RETREG1-206ENST00000510362 LZTS3O60299 673 aaPredicted RBP12.07□□□□□ -0.48
RETREG1-206ENST00000510362 HMOX1P09601 288 aa12.07□□□□□ -0.48
RETREG1-206ENST00000510362 DHX9Q08211 1270 aaKnown RBP12.07□□□□□ -0.48
RETREG1-206ENST00000510362 SLC15A2Q16348 729 aa12.07□□□□□ -0.48
RETREG1-206ENST00000510362 EML3Q32P44 896 aa12.07□□□□□ -0.48
RETREG1-206ENST00000510362 PPP1R26Q5T8A7 1209 aaPredicted RBP12.07□□□□□ -0.48
RETREG1-206ENST00000510362 PBXIP1Q96AQ6 731 aa12.07□□□□□ -0.48
RETREG1-206ENST00000510362 TMOD3Q9NYL9 352 aa12.07□□□□□ -0.48
RETREG1-206ENST00000510362 NUDCQ9Y266 331 aa12.07□□□□□ -0.48
RETREG1-206ENST00000510362 ZNF831Q5JPB2 1677 aa12.06□□□□□ -0.48
RETREG1-206ENST00000510362 ERVV-2B6SEH9 535 aa12.06□□□□□ -0.48
RETREG1-206ENST00000510362 SMPD1P17405 629 aa12.06□□□□□ -0.48
RETREG1-206ENST00000510362 LRRC4BQ9NT99 713 aa12.06□□□□□ -0.48
RETREG1-206ENST00000510362 CCNL1Q9UK58 526 aaPredicted RBP12.06□□□□□ -0.48
RETREG1-206ENST00000510362 PDZRN3Q9UPQ7 1066 aa12.06□□□□□ -0.48
RETREG1-206ENST00000510362 TUBGCP6Q96RT7 1819 aa12.06□□□□□ -0.48
RETREG1-206ENST00000510362 ADAMTS7Q9UKP4 1686 aa12.06□□□□□ -0.48
RETREG1-206ENST00000510362 KDM6AO15550 1401 aaPredicted RBP12.05□□□□□ -0.48
RETREG1-206ENST00000510362 DDX10Q13206 875 aaKnown RBP12.05□□□□□ -0.48
RETREG1-206ENST00000510362 AKAP4Q5JQC9 854 aa12.05□□□□□ -0.48
RETREG1-206ENST00000510362 PIGBQ92521 554 aa12.05□□□□□ -0.48
RETREG1-206ENST00000510362 SCTRP47872 440 aa12.04□□□□□ -0.48
RETREG1-206ENST00000510362 RALBP1Q15311 655 aa12.04□□□□□ -0.48
RETREG1-206ENST00000510362 ZNF784Q8NCA9 323 aaPredicted RBP12.04□□□□□ -0.48
RETREG1-206ENST00000510362 MKRN1Q9UHC7 482 aaKnown RBP12.04□□□□□ -0.48
RETREG1-206ENST00000510362 C4BP0C0L5 1744 aa12.03□□□□□ -0.48
RETREG1-206ENST00000510362 MRC1P22897 1456 aa12.03□□□□□ -0.48
RETREG1-206ENST00000510362 VRTNQ9H8Y1 702 aa12.03□□□□□ -0.48
RETREG1-206ENST00000510362 SPON1Q9HCB6 807 aa12.03□□□□□ -0.48
RETREG1-206ENST00000510362 CYLDQ9NQC7 956 aa12.03□□□□□ -0.48
RETREG1-206ENST00000510362 CICQ96RK0 1608 aaPredicted RBP12.02□□□□□ -0.49
RETREG1-206ENST00000510362 CABP4P57796 275 aa12.02□□□□□ -0.49
RETREG1-206ENST00000510362 ERVK-9P63128 1117 aa12.02□□□□□ -0.49
RETREG1-206ENST00000510362 GAS2L2Q8NHY3 880 aa12.02□□□□□ -0.49
RETREG1-206ENST00000510362 NOD1Q9Y239 953 aa12.02□□□□□ -0.49
RETREG1-206ENST00000510362 U2AF1L5P0DN76 240 aaPredicted RBP12.01□□□□□ -0.49
RETREG1-206ENST00000510362 U2AF1Q01081 240 aaKnown RBP eCLIP12.01□□□□□ -0.49
RETREG1-206ENST00000510362 USP4Q13107 963 aa12.01□□□□□ -0.49
RETREG1-206ENST00000510362 ZNF827Q17R98 1081 aa12.01□□□□□ -0.49
RETREG1-206ENST00000510362 MTHFSDQ2M296 383 aaKnown RBP12.01□□□□□ -0.49
RETREG1-206ENST00000510362 CC2D2BQ6DHV5 1058 aa12.01□□□□□ -0.49
RETREG1-206ENST00000510362 KLF16Q9BXK1 252 aaPredicted RBP12.01□□□□□ -0.49
RETREG1-206ENST00000510362 PGPEP1Q9NXJ5 209 aa12.01□□□□□ -0.49
RETREG1-206ENST00000510362 TFCP2L1Q9NZI6 479 aa12.01□□□□□ -0.49
RETREG1-206ENST00000510362 COL5A3P25940 1745 aaPredicted RBP12□□□□□ -0.49
RETREG1-206ENST00000510362 LOC102724428A0A0B4J2F2 783 aa12□□□□□ -0.49
RETREG1-206ENST00000510362 ATP5J2-PTCD1G3V325 749 aa12□□□□□ -0.49
RETREG1-206ENST00000510362 LILRA1O75019 489 aa12□□□□□ -0.49
RETREG1-206ENST00000510362 KCNQ4P56696 695 aa12□□□□□ -0.49
RETREG1-206ENST00000510362 SIK1P57059 783 aa12□□□□□ -0.49
RETREG1-206ENST00000510362 HPS1Q92902 700 aa12□□□□□ -0.49
RETREG1-206ENST00000510362 ASAP1Q9ULH1 1129 aa12□□□□□ -0.49
RETREG1-206ENST00000510362 MYBBP1AQ9BQG0 1328 aaKnown RBP12□□□□□ -0.49
RETREG1-206ENST00000510362 MAP3K5Q99683 1374 aa12□□□□□ -0.49
RETREG1-206ENST00000510362 COL24A1Q17RW2 1714 aa12□□□□□ -0.49
RETREG1-206ENST00000510362 UBR3Q6ZT12 1888 aa12□□□□□ -0.49
RETREG1-206ENST00000510362 MYCP01106 439 aaPredicted RBP11.99□□□□□ -0.49
RETREG1-206ENST00000510362 PRKAR2BP31323 418 aa11.99□□□□□ -0.49
RETREG1-206ENST00000510362 SLC16A10Q8TF71 515 aa11.99□□□□□ -0.49
RETREG1-206ENST00000510362 ITPKCQ96DU7 683 aa11.99□□□□□ -0.49
RETREG1-206ENST00000510362 MTFR1LQ9H019 292 aa11.99□□□□□ -0.49
RETREG1-206ENST00000510362 ATG3Q9NT62 314 aa11.99□□□□□ -0.49
RETREG1-206ENST00000510362 SIPA1L3O60292 1781 aaPredicted RBP11.99□□□□□ -0.49
RETREG1-206ENST00000510362 PNPLA7Q6ZV29 1317 aa11.98□□□□□ -0.49
RETREG1-206ENST00000510362 GNAT3A8MTJ3 354 aa11.98□□□□□ -0.49
RETREG1-206ENST00000510362 RNMTO43148 476 aaKnown RBP11.98□□□□□ -0.49
RETREG1-206ENST00000510362 NEFMP07197 916 aa11.98□□□□□ -0.49
RETREG1-206ENST00000510362 WDR4P57081 412 aaKnown RBP11.98□□□□□ -0.49
RETREG1-206ENST00000510362 TRIM50Q86XT4 487 aa11.98□□□□□ -0.49
RETREG1-206ENST00000510362 FLAD1Q8NFF5 587 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms