RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 SDSP20132 328 aa20.35■□□□□ 0.85
SCAMP1-203ENST00000510030 CAVIN4Q5BKX8 364 aa20.35■□□□□ 0.85
SCAMP1-203ENST00000510030 SP8Q8IXZ3 490 aa20.35■□□□□ 0.85
SCAMP1-203ENST00000510030 BACH2Q9BYV9 841 aa20.35■□□□□ 0.85
SCAMP1-203ENST00000510030 UPF2Q9HAU5 1272 aaKnown RBP20.35■□□□□ 0.85
SCAMP1-203ENST00000510030 TLR7Q9NYK1 1049 aaKnown RBP20.35■□□□□ 0.85
SCAMP1-203ENST00000510030 ANKIB1Q9P2G1 1089 aa20.35■□□□□ 0.85
SCAMP1-203ENST00000510030 CC2D2BQ6DHV5 1058 aa20.34■□□□□ 0.85
SCAMP1-203ENST00000510030 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.34■□□□□ 0.85
SCAMP1-203ENST00000510030 ZBTB22O15209 634 aa20.33■□□□□ 0.85
SCAMP1-203ENST00000510030 TGFB2P61812 414 aa20.33■□□□□ 0.85
SCAMP1-203ENST00000510030 C8orf34Q49A92 452 aa20.33■□□□□ 0.85
SCAMP1-203ENST00000510030 HAUS7Q99871 368 aa20.33■□□□□ 0.85
SCAMP1-203ENST00000510030 PODXL2Q9NZ53 605 aa20.33■□□□□ 0.85
SCAMP1-203ENST00000510030 ATP6V0A2Q9Y487 856 aa20.33■□□□□ 0.85
SCAMP1-203ENST00000510030 COL4A1P02462 1669 aa20.32■□□□□ 0.84
SCAMP1-203ENST00000510030 ZNF804BA4D1E1 1349 aa20.32■□□□□ 0.84
SCAMP1-203ENST00000510030 TAF5LO75529 589 aa20.32■□□□□ 0.84
SCAMP1-203ENST00000510030 ATP2B4P23634 1241 aa20.32■□□□□ 0.84
SCAMP1-203ENST00000510030 TSHZ3Q63HK5 1081 aa20.32■□□□□ 0.84
SCAMP1-203ENST00000510030 HELBQ8NG08 1087 aaPredicted RBP20.32■□□□□ 0.84
SCAMP1-203ENST00000510030 RILPL2Q969X0 211 aa20.32■□□□□ 0.84
SCAMP1-203ENST00000510030 SEMA3EO15041 775 aa20.31■□□□□ 0.84
SCAMP1-203ENST00000510030 ARID4AP29374 1257 aaPredicted RBP20.31■□□□□ 0.84
SCAMP1-203ENST00000510030 TTF1Q15361 905 aaPredicted RBP20.31■□□□□ 0.84
SCAMP1-203ENST00000510030 VPS37DQ86XT2 251 aa20.31■□□□□ 0.84
SCAMP1-203ENST00000510030 ZNF622Q969S3 477 aaKnown RBP eCLIP20.31■□□□□ 0.84
SCAMP1-203ENST00000510030 CCDC102BQ68D86 513 aa20.3■□□□□ 0.84
SCAMP1-203ENST00000510030 C15orf52Q6ZUT6 534 aaKnown RBP20.3■□□□□ 0.84
SCAMP1-203ENST00000510030 BOLA2Q9H3K6 86 aa20.3■□□□□ 0.84
SCAMP1-203ENST00000510030 GGA1Q9UJY5 639 aa20.3■□□□□ 0.84
SCAMP1-203ENST00000510030 IGSF3O75054 1194 aa20.29■□□□□ 0.84
SCAMP1-203ENST00000510030 SOGA3Q5TF21 947 aa20.29■□□□□ 0.84
SCAMP1-203ENST00000510030 RUFY2Q8WXA3 655 aa20.29■□□□□ 0.84
SCAMP1-203ENST00000510030 CD2APQ9Y5K6 639 aa20.29■□□□□ 0.84
SCAMP1-203ENST00000510030 PDS5AQ29RF7 1337 aaKnown RBP20.28■□□□□ 0.84
SCAMP1-203ENST00000510030 LTBP1Q14766 1721 aa20.28■□□□□ 0.84
SCAMP1-203ENST00000510030 ADORA1P30542 326 aa20.28■□□□□ 0.84
SCAMP1-203ENST00000510030 C1QTNF8P60827 252 aa20.28■□□□□ 0.84
SCAMP1-203ENST00000510030 PAG1Q9NWQ8 432 aa20.28■□□□□ 0.84
SCAMP1-203ENST00000510030 NSFL1CQ9UNZ2 370 aaKnown RBP20.28■□□□□ 0.84
SCAMP1-203ENST00000510030 DUOX1Q9NRD9 1551 aa20.28■□□□□ 0.84
SCAMP1-203ENST00000510030 CACNA1SQ13698 1873 aa20.28■□□□□ 0.84
SCAMP1-203ENST00000510030 MED23Q9ULK4 1368 aa20.27■□□□□ 0.84
SCAMP1-203ENST00000510030 PRPF40BQ6NWY9 871 aaKnown RBP20.27■□□□□ 0.84
SCAMP1-203ENST00000510030 TBC1D9Q6ZT07 1266 aa20.27■□□□□ 0.84
SCAMP1-203ENST00000510030 ZNF804AQ7Z570 1209 aa20.27■□□□□ 0.84
SCAMP1-203ENST00000510030 DNAJC2Q99543 621 aaKnown RBP20.27■□□□□ 0.84
SCAMP1-203ENST00000510030 FSD1Q9BTV5 496 aa20.27■□□□□ 0.84
SCAMP1-203ENST00000510030 DIAPH3Q9NSV4 1193 aa20.27■□□□□ 0.84
SCAMP1-203ENST00000510030 MYH13Q9UKX3 1938 aa20.26■□□□□ 0.83
SCAMP1-203ENST00000510030 UFL1O94874 794 aa20.26■□□□□ 0.83
SCAMP1-203ENST00000510030 REC8O95072 547 aa20.26■□□□□ 0.83
SCAMP1-203ENST00000510030 ZSCAN25Q6NSZ9 544 aa20.26■□□□□ 0.83
SCAMP1-203ENST00000510030 TMED8Q6PL24 325 aaPredicted RBP20.26■□□□□ 0.83
SCAMP1-203ENST00000510030 TTLL6Q8N841 843 aa20.26■□□□□ 0.83
SCAMP1-203ENST00000510030 KBTBD3Q8NAB2 608 aa20.26■□□□□ 0.83
SCAMP1-203ENST00000510030 EYA3Q99504 573 aa20.26■□□□□ 0.83
SCAMP1-203ENST00000510030 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.26■□□□□ 0.83
SCAMP1-203ENST00000510030 DENND2AQ9ULE3 1009 aa20.26■□□□□ 0.83
SCAMP1-203ENST00000510030 RAD50Q92878 1312 aa20.26■□□□□ 0.83
SCAMP1-203ENST00000510030 EPB41L2O43491 1005 aaKnown RBP20.25■□□□□ 0.83
SCAMP1-203ENST00000510030 ZFYP08048 801 aaPredicted RBP20.25■□□□□ 0.83
SCAMP1-203ENST00000510030 HIBADHP31937 336 aaKnown RBP20.25■□□□□ 0.83
SCAMP1-203ENST00000510030 DPP8Q6V1X1 898 aaPredicted RBP20.25■□□□□ 0.83
SCAMP1-203ENST00000510030 MPNDQ8N594 471 aa20.25■□□□□ 0.83
SCAMP1-203ENST00000510030 SUPT20HQ8NEM7 779 aa20.25■□□□□ 0.83
SCAMP1-203ENST00000510030 ZNF526Q8TF50 670 aaPredicted RBP20.25■□□□□ 0.83
SCAMP1-203ENST00000510030 PHKA1P46020 1223 aa20.24■□□□□ 0.83
SCAMP1-203ENST00000510030 GPSM2P81274 684 aa20.24■□□□□ 0.83
SCAMP1-203ENST00000510030 FKBP4Q02790 459 aaKnown RBP eCLIP20.24■□□□□ 0.83
SCAMP1-203ENST00000510030 SPATA5Q8NB90 893 aa20.24■□□□□ 0.83
SCAMP1-203ENST00000510030 AKAP11Q9UKA4 1901 aa20.23■□□□□ 0.83
SCAMP1-203ENST00000510030 GOLIM4O00461 696 aa20.23■□□□□ 0.83
SCAMP1-203ENST00000510030 CHMLP26374 656 aa20.23■□□□□ 0.83
SCAMP1-203ENST00000510030 CHRNA5P30532 468 aa20.23■□□□□ 0.83
SCAMP1-203ENST00000510030 FBXO33Q7Z6M2 555 aa20.23■□□□□ 0.83
SCAMP1-203ENST00000510030 KIAA1551Q9HCM1 1747 aa20.23■□□□□ 0.83
SCAMP1-203ENST00000510030 PIM2Q9P1W9 311 aa20.23■□□□□ 0.83
SCAMP1-203ENST00000510030 GRIN3BO60391 1043 aa20.22■□□□□ 0.83
SCAMP1-203ENST00000510030 FRAT2O75474 233 aaPredicted RBP20.22■□□□□ 0.83
SCAMP1-203ENST00000510030 MAP4K4O95819 1239 aaPredicted RBP20.22■□□□□ 0.83
SCAMP1-203ENST00000510030 MCAMP43121 646 aa20.22■□□□□ 0.83
SCAMP1-203ENST00000510030 RTKN2Q8IZC4 609 aa20.22■□□□□ 0.83
SCAMP1-203ENST00000510030 ZGPATQ8N5A5 531 aaKnown RBP20.22■□□□□ 0.83
SCAMP1-203ENST00000510030 TBC1D16Q8TBP0 767 aa20.22■□□□□ 0.83
SCAMP1-203ENST00000510030 FAM84BQ96KN1 310 aaPredicted RBP20.22■□□□□ 0.83
SCAMP1-203ENST00000510030 SLX4Q8IY92 1834 aa20.22■□□□□ 0.83
SCAMP1-203ENST00000510030 MYH7P12883 1935 aa20.21■□□□□ 0.83
SCAMP1-203ENST00000510030 C6orf229H3BNL8 230 aa20.21■□□□□ 0.83
SCAMP1-203ENST00000510030 BCAMP50895 628 aa20.21■□□□□ 0.83
SCAMP1-203ENST00000510030 MFAP1P55081 439 aaKnown RBP20.21■□□□□ 0.83
SCAMP1-203ENST00000510030 RASGRF1Q13972 1273 aa20.21■□□□□ 0.83
SCAMP1-203ENST00000510030 CCDC93Q567U6 631 aa20.21■□□□□ 0.83
SCAMP1-203ENST00000510030 DOCK2Q92608 1830 aa20.2■□□□□ 0.82
SCAMP1-203ENST00000510030 DPEP1P16444 411 aa20.2■□□□□ 0.82
SCAMP1-203ENST00000510030 GYG1P46976 350 aa20.2■□□□□ 0.82
SCAMP1-203ENST00000510030 WASHC4Q2M389 1173 aa20.2■□□□□ 0.82
SCAMP1-203ENST00000510030 ZC3H12CQ9C0D7 883 aaKnown RBP20.2■□□□□ 0.82
SCAMP1-203ENST00000510030 HMG20BQ9P0W2 317 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms