RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-223ENST00000509900 LAMB4A4D0S4 1761 aa13□□□□□ -0.33
PTPN20-223ENST00000509900 ZNF609O15014 1411 aa13□□□□□ -0.33
PTPN20-223ENST00000509900 UBN2Q6ZU65 1347 aa13□□□□□ -0.33
PTPN20-223ENST00000509900 MPNDQ8N594 471 aa13□□□□□ -0.33
PTPN20-223ENST00000509900 TMX4Q9H1E5 349 aaPredicted RBP13□□□□□ -0.33
PTPN20-223ENST00000509900 ABCC4O15439 1325 aa12.99□□□□□ -0.33
PTPN20-223ENST00000509900 SOX1O00570 391 aaPredicted RBP12.99□□□□□ -0.33
PTPN20-223ENST00000509900 PSME4Q14997 1843 aa12.99□□□□□ -0.33
PTPN20-223ENST00000509900 RTL9Q8NET4 1388 aa12.98□□□□□ -0.33
PTPN20-223ENST00000509900 RPS12P25398 132 aaKnown RBP12.98□□□□□ -0.33
PTPN20-223ENST00000509900 SREBF2Q12772 1141 aa12.98□□□□□ -0.33
PTPN20-223ENST00000509900 SUSD4Q5VX71 490 aa12.98□□□□□ -0.33
PTPN20-223ENST00000509900 ANKRD13DQ6ZTN6 518 aa12.98□□□□□ -0.33
PTPN20-223ENST00000509900 SP8Q8IXZ3 490 aa12.98□□□□□ -0.33
PTPN20-223ENST00000509900 ZNF333Q96JL9 665 aa12.98□□□□□ -0.33
PTPN20-223ENST00000509900 PCDHGA4Q9Y5G9 962 aa12.98□□□□□ -0.33
PTPN20-223ENST00000509900 CEMIPQ8WUJ3 1361 aa12.97□□□□□ -0.33
PTPN20-223ENST00000509900 GPTP24298 496 aa12.97□□□□□ -0.33
PTPN20-223ENST00000509900 CAP1Q01518 475 aa12.97□□□□□ -0.33
PTPN20-223ENST00000509900 ANGEL2Q5VTE6 544 aaKnown RBP12.97□□□□□ -0.33
PTPN20-223ENST00000509900 LRCH3Q96II8 777 aa12.97□□□□□ -0.33
PTPN20-223ENST00000509900 KCNQ5Q9NR82 932 aa12.97□□□□□ -0.33
PTPN20-223ENST00000509900 BTBD11A6QL63 1104 aa12.96□□□□□ -0.33
PTPN20-223ENST00000509900 GNAT3A8MTJ3 354 aa12.96□□□□□ -0.33
PTPN20-223ENST00000509900 NTSR2O95665 410 aa12.96□□□□□ -0.33
PTPN20-223ENST00000509900 SNRPA1P09661 255 aaKnown RBP12.96□□□□□ -0.33
PTPN20-223ENST00000509900 CD99L2Q8TCZ2 262 aa12.96□□□□□ -0.33
PTPN20-223ENST00000509900 DBNDD1Q9H9R9 158 aa12.96□□□□□ -0.33
PTPN20-223ENST00000509900 ERVV-1B6SEH8 477 aa12.95□□□□□ -0.34
PTPN20-223ENST00000509900 MORC1Q86VD1 984 aa12.95□□□□□ -0.34
PTPN20-223ENST00000509900 HS6ST3Q8IZP7 471 aa12.95□□□□□ -0.34
PTPN20-223ENST00000509900 SCAF8Q9UPN6 1271 aaKnown RBP12.95□□□□□ -0.34
PTPN20-223ENST00000509900 BBOX1O75936 387 aa12.94□□□□□ -0.34
PTPN20-223ENST00000509900 ALDH1A1P00352 501 aa12.94□□□□□ -0.34
PTPN20-223ENST00000509900 SCARF1Q14162 830 aa12.94□□□□□ -0.34
PTPN20-223ENST00000509900 PRAMEF18Q5VWM3 479 aa12.94□□□□□ -0.34
PTPN20-223ENST00000509900 ERO1AQ96HE7 468 aa12.94□□□□□ -0.34
PTPN20-223ENST00000509900 NLRP3Q96P20 1036 aa12.94□□□□□ -0.34
PTPN20-223ENST00000509900 LHX6Q9UPM6 363 aa12.94□□□□□ -0.34
PTPN20-223ENST00000509900 ZNF646O15015 1829 aaPredicted RBP12.94□□□□□ -0.34
PTPN20-223ENST00000509900 MAP3K15Q6ZN16 1313 aa12.93□□□□□ -0.34
PTPN20-223ENST00000509900 VCANP13611 3396 aa12.93□□□□□ -0.34
PTPN20-223ENST00000509900 ZNF34Q8IZ26 560 aa12.93□□□□□ -0.34
PTPN20-223ENST00000509900 EFCC1Q9HA90 598 aa12.93□□□□□ -0.34
PTPN20-223ENST00000509900 ZSWIM8A7E2V4 1837 aa12.92□□□□□ -0.34
PTPN20-223ENST00000509900 WTIPA6NIX2 430 aaPredicted RBP12.92□□□□□ -0.34
PTPN20-223ENST00000509900 ZNF280AP59817 542 aaPredicted RBP12.92□□□□□ -0.34
PTPN20-223ENST00000509900 LSM11P83369 360 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTPN20-223ENST00000509900 PTPN12Q05209 780 aaKnown RBP12.92□□□□□ -0.34
PTPN20-223ENST00000509900 TTLL12Q14166 644 aaPredicted RBP12.92□□□□□ -0.34
PTPN20-223ENST00000509900 WASHC4Q2M389 1173 aa12.92□□□□□ -0.34
PTPN20-223ENST00000509900 SLC4A8Q2Y0W8 1093 aa12.92□□□□□ -0.34
PTPN20-223ENST00000509900 SPRYD7Q5W111 196 aa12.92□□□□□ -0.34
PTPN20-223ENST00000509900 TTLL7Q6ZT98 887 aa12.92□□□□□ -0.34
PTPN20-223ENST00000509900 NGEFQ8N5V2 710 aa12.92□□□□□ -0.34
PTPN20-223ENST00000509900 DPF3Q92784 378 aa12.92□□□□□ -0.34
PTPN20-223ENST00000509900 ECE2O60344 883 aa12.91□□□□□ -0.34
PTPN20-223ENST00000509900 SLC10A5Q5PT55 438 aa12.91□□□□□ -0.34
PTPN20-223ENST00000509900 A0A1W2PPC1 479 aa12.9□□□□□ -0.34
PTPN20-223ENST00000509900 IGF2BP3O00425 579 aaKnown RBP eCLIP12.9□□□□□ -0.34
PTPN20-223ENST00000509900 MYCP01106 439 aaPredicted RBP12.9□□□□□ -0.34
PTPN20-223ENST00000509900 VIL1P09327 827 aaKnown RBP12.9□□□□□ -0.34
PTPN20-223ENST00000509900 SLC9C1Q4G0N8 1177 aa12.9□□□□□ -0.34
PTPN20-223ENST00000509900 GAS2L2Q8NHY3 880 aa12.9□□□□□ -0.34
PTPN20-223ENST00000509900 STXBP5LQ9Y2K9 1186 aa12.9□□□□□ -0.34
PTPN20-223ENST00000509900 PTCH2Q9Y6C5 1203 aa12.9□□□□□ -0.34
PTPN20-223ENST00000509900 COL4A1P02462 1669 aa12.89□□□□□ -0.35
PTPN20-223ENST00000509900 TCIRG1Q13488 830 aa12.89□□□□□ -0.35
PTPN20-223ENST00000509900 SHISA4Q96DD7 197 aa12.89□□□□□ -0.35
PTPN20-223ENST00000509900 POLR3GLQ9BT43 218 aa12.89□□□□□ -0.35
PTPN20-223ENST00000509900 ZBTB3Q9H5J0 574 aa12.89□□□□□ -0.35
PTPN20-223ENST00000509900 PANK3Q9H999 370 aa12.89□□□□□ -0.35
PTPN20-223ENST00000509900 PRDM6Q9NQX0 595 aa12.89□□□□□ -0.35
PTPN20-223ENST00000509900 ALPK3Q96L96 1907 aa12.88□□□□□ -0.35
PTPN20-223ENST00000509900 SPTBN5Q9NRC6 3674 aaKnown RBP12.88□□□□□ -0.35
PTPN20-223ENST00000509900 MANSC4A6NHS7 340 aaPredicted RBP12.88□□□□□ -0.35
PTPN20-223ENST00000509900 PBX2P40425 430 aa12.88□□□□□ -0.35
PTPN20-223ENST00000509900 CRHR2Q13324 411 aa12.88□□□□□ -0.35
PTPN20-223ENST00000509900 GRAPQ13588 217 aa12.88□□□□□ -0.35
PTPN20-223ENST00000509900 LDLRAD1Q5T700 205 aa12.88□□□□□ -0.35
PTPN20-223ENST00000509900 PPP1R42Q7Z4L9 355 aa12.88□□□□□ -0.35
PTPN20-223ENST00000509900 NBPF11Q86T75 865 aa12.88□□□□□ -0.35
PTPN20-223ENST00000509900 GRAPLQ8TC17 118 aaPredicted RBP12.88□□□□□ -0.35
PTPN20-223ENST00000509900 POLLQ9UGP5 575 aa12.88□□□□□ -0.35
PTPN20-223ENST00000509900 INHBEP58166 350 aa12.87□□□□□ -0.35
PTPN20-223ENST00000509900 SP3Q02447 781 aa12.87□□□□□ -0.35
PTPN20-223ENST00000509900 KIF6Q6ZMV9 814 aa12.87□□□□□ -0.35
PTPN20-223ENST00000509900 Q7L0L9 218 aa12.87□□□□□ -0.35
PTPN20-223ENST00000509900 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTPN20-223ENST00000509900 DEFB123Q8N688 67 aa12.87□□□□□ -0.35
PTPN20-223ENST00000509900 ERBB4Q15303 1308 aa12.87□□□□□ -0.35
PTPN20-223ENST00000509900 TTC28Q96AY4 2481 aa12.86□□□□□ -0.35
PTPN20-223ENST00000509900 ZBTB7BO15156 539 aaPredicted RBP12.86□□□□□ -0.35
PTPN20-223ENST00000509900 DIAPH1O60610 1272 aaKnown RBP12.86□□□□□ -0.35
PTPN20-223ENST00000509900 GIGYF2Q6Y7W6 1299 aaKnown RBP12.86□□□□□ -0.35
PTPN20-223ENST00000509900 DDX46Q7L014 1031 aaKnown RBP12.86□□□□□ -0.35
PTPN20-223ENST00000509900 UBE2Q1Q7Z7E8 422 aa12.86□□□□□ -0.35
PTPN20-223ENST00000509900 MYOZ2Q9NPC6 264 aa12.86□□□□□ -0.35
PTPN20-223ENST00000509900 NSFL1CQ9UNZ2 370 aaKnown RBP12.86□□□□□ -0.35
PTPN20-223ENST00000509900 C6orf229H3BNL8 230 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms