RNA–Protein interactions for RNA: ENST00000509618.1

HTT-206, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-206ENST00000509618 CDAN1Q8IWY9 1227 aa6.52□□□□□ -1.37
HTT-206ENST00000509618 DEFB123Q8N688 67 aa6.52□□□□□ -1.37
HTT-206ENST00000509618 DPF3Q92784 378 aa6.52□□□□□ -1.37
HTT-206ENST00000509618 ERO1AQ96HE7 468 aa6.52□□□□□ -1.37
HTT-206ENST00000509618 SEC31BQ9NQW1 1179 aa6.52□□□□□ -1.37
HTT-206ENST00000509618 ANGEL1Q9UNK9 670 aaKnown RBP6.52□□□□□ -1.37
HTT-206ENST00000509618 LAMB1P07942 1786 aa6.52□□□□□ -1.37
HTT-206ENST00000509618 PSME4Q14997 1843 aa6.51□□□□□ -1.37
HTT-206ENST00000509618 UFL1O94874 794 aa6.51□□□□□ -1.37
HTT-206ENST00000509618 USP17L8P0C7I0 530 aa6.51□□□□□ -1.37
HTT-206ENST00000509618 KLRK1P26718 216 aa6.51□□□□□ -1.37
HTT-206ENST00000509618 EIF4A1P60842 406 aaKnown RBP6.51□□□□□ -1.37
HTT-206ENST00000509618 RTL5Q5HYW3 569 aaPredicted RBP6.51□□□□□ -1.37
HTT-206ENST00000509618 DDX46Q7L014 1031 aaKnown RBP6.51□□□□□ -1.37
HTT-206ENST00000509618 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.51□□□□□ -1.37
HTT-206ENST00000509618 TMEM106CQ9BVX2 250 aa6.51□□□□□ -1.37
HTT-206ENST00000509618 MTMR10Q9NXD2 777 aa6.51□□□□□ -1.37
HTT-206ENST00000509618 OTOFQ9HC10 1997 aa6.51□□□□□ -1.37
HTT-206ENST00000509618 ALPK3Q96L96 1907 aa6.5□□□□□ -1.37
HTT-206ENST00000509618 PER1O15534 1290 aaPredicted RBP6.5□□□□□ -1.37
HTT-206ENST00000509618 ZEB1P37275 1124 aaPredicted RBP6.5□□□□□ -1.37
HTT-206ENST00000509618 SP3Q02447 781 aa6.5□□□□□ -1.37
HTT-206ENST00000509618 PARP10Q53GL7 1025 aa6.5□□□□□ -1.37
HTT-206ENST00000509618 SAMD1Q6SPF0 538 aaPredicted RBP6.5□□□□□ -1.37
HTT-206ENST00000509618 PPP1R42Q7Z4L9 355 aa6.5□□□□□ -1.37
HTT-206ENST00000509618 FAM43AQ8N2R8 423 aa6.5□□□□□ -1.37
HTT-206ENST00000509618 BRI3BPQ8WY22 251 aa6.5□□□□□ -1.37
HTT-206ENST00000509618 NECTIN2Q92692 538 aa6.5□□□□□ -1.37
HTT-206ENST00000509618 GUCD1Q96NT3 240 aa6.5□□□□□ -1.37
HTT-206ENST00000509618 TMX4Q9H1E5 349 aaPredicted RBP6.5□□□□□ -1.37
HTT-206ENST00000509618 PRDM6Q9NQX0 595 aa6.5□□□□□ -1.37
HTT-206ENST00000509618 STXBP5LQ9Y2K9 1186 aa6.5□□□□□ -1.37
HTT-206ENST00000509618 PRUNE2Q8WUY3 3088 aa6.49□□□□□ -1.37
HTT-206ENST00000509618 MANSC4A6NHS7 340 aaPredicted RBP6.49□□□□□ -1.37
HTT-206ENST00000509618 KRT24Q2M2I5 525 aa6.49□□□□□ -1.37
HTT-206ENST00000509618 DACT2Q5SW24 774 aa6.49□□□□□ -1.37
HTT-206ENST00000509618 TXNRD3Q86VQ6 643 aa6.49□□□□□ -1.37
HTT-206ENST00000509618 AGBL3Q8NEM8 1001 aa6.49□□□□□ -1.37
HTT-206ENST00000509618 FAM89AQ96GI7 184 aa6.49□□□□□ -1.37
HTT-206ENST00000509618 ZBED3Q96IU2 234 aaPredicted RBP6.49□□□□□ -1.37
HTT-206ENST00000509618 MS4A4AQ96JQ5 239 aa6.49□□□□□ -1.37
HTT-206ENST00000509618 TRMT112Q9UI30 125 aaKnown RBP6.49□□□□□ -1.37
HTT-206ENST00000509618 MUC3AQ02505 3323 aa6.49□□□□□ -1.37
HTT-206ENST00000509618 SH3TC1Q8TE82 1336 aa6.49□□□□□ -1.37
HTT-206ENST00000509618 ALDH1A1P00352 501 aa6.48□□□□□ -1.37
HTT-206ENST00000509618 COL9A1P20849 921 aa6.48□□□□□ -1.37
HTT-206ENST00000509618 BCAMP50895 628 aa6.48□□□□□ -1.37
HTT-206ENST00000509618 AIMP1Q12904 312 aaKnown RBP6.48□□□□□ -1.37
HTT-206ENST00000509618 TCIRG1Q13488 830 aa6.48□□□□□ -1.37
HTT-206ENST00000509618 ARMC9Q7Z3E5 817 aa6.48□□□□□ -1.37
HTT-206ENST00000509618 DIS3LQ8TF46 1054 aaKnown RBP6.48□□□□□ -1.37
HTT-206ENST00000509618 XAGE3Q8WTP9 111 aa6.48□□□□□ -1.37
HTT-206ENST00000509618 JARID2Q92833 1246 aaPredicted RBP6.48□□□□□ -1.37
HTT-206ENST00000509618 CCDC85AQ96PX6 553 aaPredicted RBP6.48□□□□□ -1.37
HTT-206ENST00000509618 ZMYND8Q9ULU4 1186 aaPredicted RBP6.48□□□□□ -1.37
HTT-206ENST00000509618 CLRN2A0PK11 232 aa6.47□□□□□ -1.37
HTT-206ENST00000509618 TESPA1A2RU30 521 aaPredicted RBP6.47□□□□□ -1.37
HTT-206ENST00000509618 ATP5J2-PTCD1G3V325 749 aa6.47□□□□□ -1.37
HTT-206ENST00000509618 CCL5P13501 91 aa6.47□□□□□ -1.37
HTT-206ENST00000509618 EIF2S2P20042 333 aaKnown RBP6.47□□□□□ -1.37
HTT-206ENST00000509618 SF3B3Q15393 1217 aaKnown RBP6.47□□□□□ -1.37
HTT-206ENST00000509618 TAF7Q15545 349 aaPredicted RBP6.47□□□□□ -1.37
HTT-206ENST00000509618 MAP3K11Q16584 847 aa6.47□□□□□ -1.37
HTT-206ENST00000509618 NBPF12Q5TAG4 269 aaPredicted RBP6.47□□□□□ -1.37
HTT-206ENST00000509618 COPS6Q7L5N1 327 aa6.47□□□□□ -1.37
HTT-206ENST00000509618 SLC10A4Q96EP9 437 aa6.47□□□□□ -1.37
HTT-206ENST00000509618 CFAP53Q96M91 514 aa6.47□□□□□ -1.37
HTT-206ENST00000509618 FAM161BQ96MY7 647 aa6.47□□□□□ -1.37
HTT-206ENST00000509618 GDF15Q99988 308 aa6.47□□□□□ -1.37
HTT-206ENST00000509618 ELP3Q9H9T3 547 aa6.47□□□□□ -1.37
HTT-206ENST00000509618 PODXL2Q9NZ53 605 aa6.47□□□□□ -1.37
HTT-206ENST00000509618 LAMA2P24043 3122 aaKnown RBP6.46□□□□□ -1.37
HTT-206ENST00000509618 USP17L3A6NCW0 530 aa6.46□□□□□ -1.38
HTT-206ENST00000509618 USP17L4A6NCW7 530 aa6.46□□□□□ -1.38
HTT-206ENST00000509618 USP2O75604 605 aaPredicted RBP6.46□□□□□ -1.38
HTT-206ENST00000509618 FARP2O94887 1054 aaPredicted RBP6.46□□□□□ -1.38
HTT-206ENST00000509618 ZBTB48P10074 688 aaPredicted RBP6.46□□□□□ -1.38
HTT-206ENST00000509618 SYN1P17600 705 aa6.46□□□□□ -1.38
HTT-206ENST00000509618 GJA8P48165 433 aa6.46□□□□□ -1.38
HTT-206ENST00000509618 TAF1CQ15572 869 aaPredicted RBP6.46□□□□□ -1.38
HTT-206ENST00000509618 USP17L1Q7RTZ2 530 aa6.46□□□□□ -1.38
HTT-206ENST00000509618 KIAA0825Q8IV33 1275 aa6.46□□□□□ -1.38
HTT-206ENST00000509618 CERS5Q8N5B7 392 aa6.46□□□□□ -1.38
HTT-206ENST00000509618 FBXW7Q969H0 707 aa6.46□□□□□ -1.38
HTT-206ENST00000509618 OPTNQ96CV9 577 aa6.46□□□□□ -1.38
HTT-206ENST00000509618 TRIM47Q96LD4 638 aa6.46□□□□□ -1.38
HTT-206ENST00000509618 EYA3Q99504 573 aa6.46□□□□□ -1.38
HTT-206ENST00000509618 ZC3H12CQ9C0D7 883 aaKnown RBP6.46□□□□□ -1.38
HTT-206ENST00000509618 UNC93B1Q9H1C4 597 aa6.46□□□□□ -1.38
HTT-206ENST00000509618 DEFB129Q9H1M3 183 aa6.46□□□□□ -1.38
HTT-206ENST00000509618 GGA1Q9UJY5 639 aa6.46□□□□□ -1.38
HTT-206ENST00000509618 NF2P35240 595 aa6.45□□□□□ -1.38
HTT-206ENST00000509618 RPS8P62241 208 aaKnown RBP6.45□□□□□ -1.38
HTT-206ENST00000509618 LACTBP83111 547 aaPredicted RBP6.45□□□□□ -1.38
HTT-206ENST00000509618 DDX10Q13206 875 aaKnown RBP6.45□□□□□ -1.38
HTT-206ENST00000509618 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.45□□□□□ -1.38
HTT-206ENST00000509618 TMC4Q7Z404 712 aa6.45□□□□□ -1.38
HTT-206ENST00000509618 C7orf61Q8IZ16 206 aa6.45□□□□□ -1.38
HTT-206ENST00000509618 U2AF1L4Q8WU68 220 aaKnown RBP6.45□□□□□ -1.38
HTT-206ENST00000509618 RTF1Q92541 710 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms