RNA–Protein interactions for RNA: ENST00000509535.5

RACK1-222, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-222	ENST00000509535	SLC4A8	Q2Y0W8	1093 aa		11.23	□□□□□ -0.61
RACK1-222	ENST00000509535	PODXL2	Q9NZ53	605 aa		11.23	□□□□□ -0.61
RACK1-222	ENST00000509535	ANGEL1	Q9UNK9	670 aa	Known RBP	11.23	□□□□□ -0.61
RACK1-222	ENST00000509535	WNT10B	O00744	389 aa		11.22	□□□□□ -0.61
RACK1-222	ENST00000509535	RPS8	P62241	208 aa	Known RBP	11.22	□□□□□ -0.61
RACK1-222	ENST00000509535	CRHR2	Q13324	411 aa		11.22	□□□□□ -0.61
RACK1-222	ENST00000509535	SLC9C1	Q4G0N8	1177 aa		11.22	□□□□□ -0.61
RACK1-222	ENST00000509535	COPS6	Q7L5N1	327 aa		11.22	□□□□□ -0.61
RACK1-222	ENST00000509535	NBPF11	Q86T75	865 aa		11.22	□□□□□ -0.61
RACK1-222	ENST00000509535	SLC10A4	Q96EP9	437 aa		11.22	□□□□□ -0.61
RACK1-222	ENST00000509535	ANKIB1	Q9P2G1	1089 aa		11.22	□□□□□ -0.61
RACK1-222	ENST00000509535	GGA1	Q9UJY5	639 aa		11.22	□□□□□ -0.61
RACK1-222	ENST00000509535	FZD1	Q9UP38	647 aa		11.22	□□□□□ -0.61
RACK1-222	ENST00000509535	MYH3	P11055	1940 aa		11.21	□□□□□ -0.61
RACK1-222	ENST00000509535	USP17L3	A6NCW0	530 aa		11.21	□□□□□ -0.61
RACK1-222	ENST00000509535	USP17L4	A6NCW7	530 aa		11.21	□□□□□ -0.61
RACK1-222	ENST00000509535	MYC	P01106	439 aa	Predicted RBP	11.21	□□□□□ -0.61
RACK1-222	ENST00000509535	ZBTB48	P10074	688 aa	Predicted RBP	11.21	□□□□□ -0.61
RACK1-222	ENST00000509535	MNX1	P50219	401 aa	Predicted RBP	11.21	□□□□□ -0.61
RACK1-222	ENST00000509535	SP3	Q02447	781 aa		11.21	□□□□□ -0.61
RACK1-222	ENST00000509535	CCDC184	Q52MB2	194 aa		11.21	□□□□□ -0.61
RACK1-222	ENST00000509535	USP17L1	Q7RTZ2	530 aa		11.21	□□□□□ -0.61
RACK1-222	ENST00000509535	XAGE3	Q8WTP9	111 aa		11.21	□□□□□ -0.61
RACK1-222	ENST00000509535	FAM89A	Q96GI7	184 aa		11.21	□□□□□ -0.61
RACK1-222	ENST00000509535	SASH1	O94885	1247 aa		11.2	□□□□□ -0.62
RACK1-222	ENST00000509535	RTL5	Q5HYW3	569 aa	Predicted RBP	11.2	□□□□□ -0.62
RACK1-222	ENST00000509535	OTUD7B	Q6GQQ9	843 aa		11.2	□□□□□ -0.62
RACK1-222	ENST00000509535	OGFOD1	Q8N543	542 aa		11.2	□□□□□ -0.62
RACK1-222	ENST00000509535	WNK4	Q96J92	1243 aa		11.2	□□□□□ -0.62
RACK1-222	ENST00000509535	CLMN	Q96JQ2	1002 aa		11.2	□□□□□ -0.62
RACK1-222	ENST00000509535	PTCH2	Q9Y6C5	1203 aa		11.2	□□□□□ -0.62
RACK1-222	ENST00000509535	CCER2	I3L3R5	266 aa		11.19	□□□□□ -0.62
RACK1-222	ENST00000509535	PODN	Q7Z5L7	613 aa		11.19	□□□□□ -0.62
RACK1-222	ENST00000509535	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.19	□□□□□ -0.62
RACK1-222	ENST00000509535	DPF3	Q92784	378 aa		11.19	□□□□□ -0.62
RACK1-222	ENST00000509535	PLEKHF1	Q96S99	279 aa		11.19	□□□□□ -0.62
RACK1-222	ENST00000509535	MXD3	Q9BW11	206 aa		11.19	□□□□□ -0.62
RACK1-222	ENST00000509535	WTIP	A6NIX2	430 aa	Predicted RBP	11.18	□□□□□ -0.62
RACK1-222	ENST00000509535	PRO3102	Q9H379	93 aa		11.18	□□□□□ -0.62
RACK1-222	ENST00000509535	SEC31B	Q9NQW1	1179 aa		11.18	□□□□□ -0.62
RACK1-222	ENST00000509535	SSC5D	A1L4H1	1573 aa		11.18	□□□□□ -0.62
RACK1-222	ENST00000509535	COL1A1	P02452	1464 aa	Predicted RBP	11.18	□□□□□ -0.62
RACK1-222	ENST00000509535	ALPK3	Q96L96	1907 aa		11.17	□□□□□ -0.62
RACK1-222	ENST00000509535	IRS4	O14654	1257 aa	Predicted RBP	11.17	□□□□□ -0.62
RACK1-222	ENST00000509535	NEFM	P07197	916 aa		11.17	□□□□□ -0.62
RACK1-222	ENST00000509535	MAP3K11	Q16584	847 aa		11.17	□□□□□ -0.62
RACK1-222	ENST00000509535	DACT2	Q5SW24	774 aa		11.17	□□□□□ -0.62
RACK1-222	ENST00000509535	MIER1	Q8N108	512 aa		11.17	□□□□□ -0.62
RACK1-222	ENST00000509535	TSPYL4	Q9UJ04	414 aa		11.17	□□□□□ -0.62
RACK1-222	ENST00000509535	XDH	P47989	1333 aa		11.16	□□□□□ -0.62
RACK1-222	ENST00000509535	MYO3B	Q8WXR4	1341 aa		11.16	□□□□□ -0.62
RACK1-222	ENST00000509535	ATP5J2-PTCD1	G3V325	749 aa		11.16	□□□□□ -0.62
RACK1-222	ENST00000509535	SOX1	O00570	391 aa	Predicted RBP	11.16	□□□□□ -0.62
RACK1-222	ENST00000509535	PPP1R12B	O60237	982 aa	Predicted RBP	11.16	□□□□□ -0.62
RACK1-222	ENST00000509535	GJA5	P36382	358 aa		11.16	□□□□□ -0.62
RACK1-222	ENST00000509535	ARHGEF6	Q15052	776 aa		11.16	□□□□□ -0.62
RACK1-222	ENST00000509535	SH3TC2	Q8TF17	1288 aa		11.16	□□□□□ -0.62
RACK1-222	ENST00000509535	FBXW7	Q969H0	707 aa		11.16	□□□□□ -0.62
RACK1-222	ENST00000509535	PTPN18	Q99952	460 aa		11.16	□□□□□ -0.62
RACK1-222	ENST00000509535	ISCA1	Q9BUE6	129 aa		11.16	□□□□□ -0.62
RACK1-222	ENST00000509535	NFE2L2	Q16236	605 aa		11.15	□□□□□ -0.62
RACK1-222	ENST00000509535	PLBD2	Q8NHP8	589 aa		11.15	□□□□□ -0.62
RACK1-222	ENST00000509535	SHISA4	Q96DD7	197 aa		11.15	□□□□□ -0.62
RACK1-222	ENST00000509535	LRCH3	Q96II8	777 aa		11.15	□□□□□ -0.62
RACK1-222	ENST00000509535	DEFB129	Q9H1M3	183 aa		11.15	□□□□□ -0.62
RACK1-222	ENST00000509535	MRS2	Q9HD23	443 aa		11.15	□□□□□ -0.62
RACK1-222	ENST00000509535	ADAMTS8	Q9UP79	889 aa		11.15	□□□□□ -0.62
RACK1-222	ENST00000509535	MGAM	O43451	1857 aa		11.15	□□□□□ -0.63
RACK1-222	ENST00000509535	TESPA1	A2RU30	521 aa	Predicted RBP	11.14	□□□□□ -0.63
RACK1-222	ENST00000509535	UNCX	A6NJT0	531 aa		11.14	□□□□□ -0.63
RACK1-222	ENST00000509535	ATP2B4	P23634	1241 aa		11.14	□□□□□ -0.63
RACK1-222	ENST00000509535	STRIP1	Q5VSL9	837 aa		11.14	□□□□□ -0.63
RACK1-222	ENST00000509535	ANKRD13D	Q6ZTN6	518 aa		11.14	□□□□□ -0.63
RACK1-222	ENST00000509535	MED23	Q9ULK4	1368 aa		11.14	□□□□□ -0.63
RACK1-222	ENST00000509535		A0A1W2PPC1	479 aa		11.13	□□□□□ -0.63
RACK1-222	ENST00000509535	MMP14	P50281	582 aa		11.13	□□□□□ -0.63
RACK1-222	ENST00000509535	TAF1C	Q15572	869 aa	Predicted RBP	11.13	□□□□□ -0.63
RACK1-222	ENST00000509535	KIAA0825	Q8IV33	1275 aa		11.13	□□□□□ -0.63
RACK1-222	ENST00000509535	ZBED3	Q96IU2	234 aa	Predicted RBP	11.13	□□□□□ -0.63
RACK1-222	ENST00000509535	HTATIP2	Q9BUP3	242 aa		11.13	□□□□□ -0.63
RACK1-222	ENST00000509535	NR2E3	Q9Y5X4	410 aa		11.13	□□□□□ -0.63
RACK1-222	ENST00000509535	IREB2	P48200	963 aa	Known RBP	11.12	□□□□□ -0.63
RACK1-222	ENST00000509535	MTFR1	Q15390	333 aa		11.12	□□□□□ -0.63
RACK1-222	ENST00000509535	CCDC152	Q4G0S7	254 aa		11.12	□□□□□ -0.63
RACK1-222	ENST00000509535	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.12	□□□□□ -0.63
RACK1-222	ENST00000509535	ARHGAP39	Q9C0H5	1083 aa		11.12	□□□□□ -0.63
RACK1-222	ENST00000509535	PNN	Q9H307	717 aa	Known RBP	11.12	□□□□□ -0.63
RACK1-222	ENST00000509535	ZFYVE28	Q9HCC9	887 aa		11.12	□□□□□ -0.63
RACK1-222	ENST00000509535	CHPF2	Q9P2E5	772 aa		11.12	□□□□□ -0.63
RACK1-222	ENST00000509535	VCAN	P13611	3396 aa		11.12	□□□□□ -0.63
RACK1-222	ENST00000509535	ZBTB7B	O15156	539 aa	Predicted RBP	11.11	□□□□□ -0.63
RACK1-222	ENST00000509535	USP2	O75604	605 aa	Predicted RBP	11.11	□□□□□ -0.63
RACK1-222	ENST00000509535	HSP90B1	P14625	803 aa	Known RBP	11.11	□□□□□ -0.63
RACK1-222	ENST00000509535	WDR43	Q15061	677 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
RACK1-222	ENST00000509535	SUPT20HL1	Q3ZLR7	823 aa		11.11	□□□□□ -0.63
RACK1-222	ENST00000509535	UBE2Q1	Q7Z7E8	422 aa		11.11	□□□□□ -0.63
RACK1-222	ENST00000509535	ANKRD18A	Q8IVF6	992 aa		11.11	□□□□□ -0.63
RACK1-222	ENST00000509535	ANKRD13A	Q8IZ07	590 aa		11.11	□□□□□ -0.63
RACK1-222	ENST00000509535	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.11	□□□□□ -0.63
RACK1-222	ENST00000509535	MS4A4A	Q96JQ5	239 aa		11.11	□□□□□ -0.63

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