RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 E9PSI1 815 aa18.57■□□□□ 0.56
HMGCL-208ENST00000509389 VAMP4O75379 141 aa18.57■□□□□ 0.56
HMGCL-208ENST00000509389 BRPF1P55201 1214 aaPredicted RBP18.57■□□□□ 0.56
HMGCL-208ENST00000509389 FKBP5Q13451 457 aaPredicted RBP18.57■□□□□ 0.56
HMGCL-208ENST00000509389 USP17L1Q7RTZ2 530 aa18.57■□□□□ 0.56
HMGCL-208ENST00000509389 PLA2G12BQ9BX93 195 aa18.57■□□□□ 0.56
HMGCL-208ENST00000509389 GBA2Q9HCG7 927 aaPredicted RBP18.57■□□□□ 0.56
HMGCL-208ENST00000509389 SPINK5Q9NQ38 1064 aaPredicted RBP18.57■□□□□ 0.56
HMGCL-208ENST00000509389 MED23Q9ULK4 1368 aa18.57■□□□□ 0.56
HMGCL-208ENST00000509389 CCT4P50991 539 aaKnown RBP18.56■□□□□ 0.56
HMGCL-208ENST00000509389 CASP7P55210 303 aa18.56■□□□□ 0.56
HMGCL-208ENST00000509389 SULF1Q8IWU6 871 aa18.56■□□□□ 0.56
HMGCL-208ENST00000509389 C2orf69Q8N8R5 385 aa18.56■□□□□ 0.56
HMGCL-208ENST00000509389 DNAAF4Q8WXU2 420 aa18.56■□□□□ 0.56
HMGCL-208ENST00000509389 ZIC5Q96T25 663 aa18.56■□□□□ 0.56
HMGCL-208ENST00000509389 USP17L8P0C7I0 530 aa18.55■□□□□ 0.56
HMGCL-208ENST00000509389 IGHMBP2P38935 993 aaKnown RBP18.55■□□□□ 0.56
HMGCL-208ENST00000509389 EXOSC9Q06265 439 aaKnown RBP18.55■□□□□ 0.56
HMGCL-208ENST00000509389 NOGQ13253 232 aa18.55■□□□□ 0.56
HMGCL-208ENST00000509389 SCARF1Q14162 830 aa18.55■□□□□ 0.56
HMGCL-208ENST00000509389 LINS1Q8NG48 757 aa18.55■□□□□ 0.56
HMGCL-208ENST00000509389 MYH16Q9H6N6 1097 aa18.55■□□□□ 0.56
HMGCL-208ENST00000509389 ZNF646O15015 1829 aaPredicted RBP18.55■□□□□ 0.56
HMGCL-208ENST00000509389 CA12O43570 354 aa18.55■□□□□ 0.56
HMGCL-208ENST00000509389 ANGEL2Q5VTE6 544 aaKnown RBP18.55■□□□□ 0.56
HMGCL-208ENST00000509389 RGMBQ6NW40 437 aa18.55■□□□□ 0.56
HMGCL-208ENST00000509389 ABHD8Q96I13 439 aa18.55■□□□□ 0.56
HMGCL-208ENST00000509389 MYOZ2Q9NPC6 264 aa18.55■□□□□ 0.56
HMGCL-208ENST00000509389 FAM155AB1AL88 458 aaPredicted RBP18.54■□□□□ 0.56
HMGCL-208ENST00000509389 CSF1RP07333 972 aa18.54■□□□□ 0.56
HMGCL-208ENST00000509389 ITGA6P23229 1130 aa18.54■□□□□ 0.56
HMGCL-208ENST00000509389 FAM161AQ3B820 660 aa18.54■□□□□ 0.56
HMGCL-208ENST00000509389 TXNRD3Q86VQ6 643 aa18.54■□□□□ 0.56
HMGCL-208ENST00000509389 CDCA5Q96FF9 252 aa18.54■□□□□ 0.56
HMGCL-208ENST00000509389 LEMD3Q9Y2U8 911 aa18.54■□□□□ 0.56
HMGCL-208ENST00000509389 CASP8AP2Q9UKL3 1982 aa18.53■□□□□ 0.56
HMGCL-208ENST00000509389 MXD3Q9BW11 206 aa18.53■□□□□ 0.56
HMGCL-208ENST00000509389 DACT2Q5SW24 774 aa18.52■□□□□ 0.55
HMGCL-208ENST00000509389 CCDC102AQ96A19 550 aa18.52■□□□□ 0.55
HMGCL-208ENST00000509389 MPHOSPH8Q99549 860 aa18.52■□□□□ 0.55
HMGCL-208ENST00000509389 ANKRD2Q9GZV1 360 aa18.52■□□□□ 0.55
HMGCL-208ENST00000509389 COA1Q9GZY4 146 aa18.52■□□□□ 0.55
HMGCL-208ENST00000509389 ZNF804BA4D1E1 1349 aa18.51■□□□□ 0.55
HMGCL-208ENST00000509389 ZNF157P51786 506 aaPredicted RBP18.51■□□□□ 0.55
HMGCL-208ENST00000509389 STRIP1Q5VSL9 837 aa18.51■□□□□ 0.55
HMGCL-208ENST00000509389 FBXW7Q969H0 707 aa18.51■□□□□ 0.55
HMGCL-208ENST00000509389 PITPNM2Q9BZ72 1349 aa18.51■□□□□ 0.55
HMGCL-208ENST00000509389 F6X3S4 739 aa18.5■□□□□ 0.55
HMGCL-208ENST00000509389 KLRK1P26718 216 aa18.5■□□□□ 0.55
HMGCL-208ENST00000509389 ANKRD18BA2A2Z9 1011 aa18.49■□□□□ 0.55
HMGCL-208ENST00000509389 KIF23Q02241 960 aaPredicted RBP18.49■□□□□ 0.55
HMGCL-208ENST00000509389 CHRNDQ07001 517 aa18.49■□□□□ 0.55
HMGCL-208ENST00000509389 NBPF9Q3BBW0 867 aa18.49■□□□□ 0.55
HMGCL-208ENST00000509389 BEND3Q5T5X7 828 aa18.49■□□□□ 0.55
HMGCL-208ENST00000509389 SCAF8Q9UPN6 1271 aaKnown RBP18.49■□□□□ 0.55
HMGCL-208ENST00000509389 MYO3BQ8WXR4 1341 aa18.49■□□□□ 0.55
HMGCL-208ENST00000509389 SLC10A3P09131 477 aa18.48■□□□□ 0.55
HMGCL-208ENST00000509389 FOXO4P98177 505 aa18.48■□□□□ 0.55
HMGCL-208ENST00000509389 OGFOD1Q8N543 542 aa18.48■□□□□ 0.55
HMGCL-208ENST00000509389 TTLL5Q6EMB2 1281 aa18.47■□□□□ 0.55
HMGCL-208ENST00000509389 A0A1B0GUL6 1792 aa18.47■□□□□ 0.55
HMGCL-208ENST00000509389 PAPPA2Q9BXP8 1791 aa18.46■□□□□ 0.55
HMGCL-208ENST00000509389 KCNJ4P48050 445 aa18.46■□□□□ 0.55
HMGCL-208ENST00000509389 FKBP1BP68106 108 aa18.46■□□□□ 0.55
HMGCL-208ENST00000509389 AKAP11Q9UKA4 1901 aa18.46■□□□□ 0.55
HMGCL-208ENST00000509389 SNAP23O00161 211 aa18.45■□□□□ 0.54
HMGCL-208ENST00000509389 WNT10BO00744 389 aa18.45■□□□□ 0.54
HMGCL-208ENST00000509389 GTF2IP78347 998 aa18.45■□□□□ 0.54
HMGCL-208ENST00000509389 IFIT5Q13325 482 aaKnown RBP18.45■□□□□ 0.54
HMGCL-208ENST00000509389 PRAMEF18Q5VWM3 479 aa18.45■□□□□ 0.54
HMGCL-208ENST00000509389 HELBQ8NG08 1087 aaPredicted RBP18.45■□□□□ 0.54
HMGCL-208ENST00000509389 CHMP3Q9Y3E7 222 aa18.45■□□□□ 0.54
HMGCL-208ENST00000509389 IRS2Q9Y4H2 1338 aa18.45■□□□□ 0.54
HMGCL-208ENST00000509389 TAF5LO75529 589 aa18.44■□□□□ 0.54
HMGCL-208ENST00000509389 MMP14P50281 582 aa18.44■□□□□ 0.54
HMGCL-208ENST00000509389 EPHA10Q5JZY3 1008 aa18.44■□□□□ 0.54
HMGCL-208ENST00000509389 MOB2Q70IA6 237 aa18.44■□□□□ 0.54
HMGCL-208ENST00000509389 RASAL3Q86YV0 1011 aa18.44■□□□□ 0.54
HMGCL-208ENST00000509389 KIAA0825Q8IV33 1275 aa18.44■□□□□ 0.54
HMGCL-208ENST00000509389 CSRNP1Q96S65 589 aa18.44■□□□□ 0.54
HMGCL-208ENST00000509389 MCOLN1Q9GZU1 580 aa18.44■□□□□ 0.54
HMGCL-208ENST00000509389 CD209Q9NNX6 404 aa18.44■□□□□ 0.54
HMGCL-208ENST00000509389 SAGE1Q9NXZ1 904 aa18.44■□□□□ 0.54
HMGCL-208ENST00000509389 RCAN3Q9UKA8 241 aa18.44■□□□□ 0.54
HMGCL-208ENST00000509389 CCDC85CA6NKD9 419 aa18.43■□□□□ 0.54
HMGCL-208ENST00000509389 SASH1O94885 1247 aa18.43■□□□□ 0.54
HMGCL-208ENST00000509389 CT47B1P0C2W7 299 aaPredicted RBP18.43■□□□□ 0.54
HMGCL-208ENST00000509389 LMBR1LQ6UX01 489 aa18.43■□□□□ 0.54
HMGCL-208ENST00000509389 RNF186Q9NXI6 227 aa18.43■□□□□ 0.54
HMGCL-208ENST00000509389 GRM8O00222 908 aa18.42■□□□□ 0.54
HMGCL-208ENST00000509389 TRPA1O75762 1119 aa18.42■□□□□ 0.54
HMGCL-208ENST00000509389 C15orf52Q6ZUT6 534 aaKnown RBP18.42■□□□□ 0.54
HMGCL-208ENST00000509389 HDAC9Q9UKV0 1011 aa18.42■□□□□ 0.54
HMGCL-208ENST00000509389 UBE2Q2LH0YL09 131 aa18.42■□□□□ 0.54
HMGCL-208ENST00000509389 DGKZQ13574 1117 aa18.42■□□□□ 0.54
HMGCL-208ENST00000509389 ZBED3Q96IU2 234 aaPredicted RBP18.42■□□□□ 0.54
HMGCL-208ENST00000509389 ZNF594Q96JF6 807 aaPredicted RBP18.42■□□□□ 0.54
HMGCL-208ENST00000509389 SUPT16HQ9Y5B9 1047 aaKnown RBP18.42■□□□□ 0.54
HMGCL-208ENST00000509389 ALDH1L1O75891 902 aa18.41■□□□□ 0.54
HMGCL-208ENST00000509389 CCDC57Q2TAC2 916 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms