RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 TICAM2Q86XR7 235 aa15.23■□□□□ 0.03
LYSMD3-204ENST00000509384 ARAP2Q8WZ64 1704 aa15.23■□□□□ 0.03
LYSMD3-204ENST00000509384 QSER1Q2KHR3 1735 aa15.23■□□□□ 0.03
LYSMD3-204ENST00000509384 NRXN2Q9P2S2 1712 aa15.23■□□□□ 0.03
LYSMD3-204ENST00000509384 EPB41L2O43491 1005 aaKnown RBP15.22■□□□□ 0.03
LYSMD3-204ENST00000509384 HOXA10P31260 410 aaPredicted RBP15.22■□□□□ 0.03
LYSMD3-204ENST00000509384 KIAA1211Q6ZU35 1233 aa15.22■□□□□ 0.03
LYSMD3-204ENST00000509384 FAM227BQ96M60 508 aa15.22■□□□□ 0.03
LYSMD3-204ENST00000509384 AK9Q5TCS8 1911 aa15.22■□□□□ 0.03
LYSMD3-204ENST00000509384 A0A0D9SFI3 127 aa15.22■□□□□ 0.03
LYSMD3-204ENST00000509384 MCCP23508 829 aa15.22■□□□□ 0.03
LYSMD3-204ENST00000509384 PDE6BP35913 854 aa15.22■□□□□ 0.03
LYSMD3-204ENST00000509384 LRRFIP1Q32MZ4 808 aaKnown RBP15.22■□□□□ 0.03
LYSMD3-204ENST00000509384 PI16Q6UXB8 463 aa15.22■□□□□ 0.03
LYSMD3-204ENST00000509384 CRAMP1Q96RY5 1269 aa15.22■□□□□ 0.03
LYSMD3-204ENST00000509384 ANTXR1Q9H6X2 564 aa15.22■□□□□ 0.03
LYSMD3-204ENST00000509384 BCAMP50895 628 aa15.21■□□□□ 0.03
LYSMD3-204ENST00000509384 TTF1Q15361 905 aaPredicted RBP15.21■□□□□ 0.03
LYSMD3-204ENST00000509384 CAVIN4Q5BKX8 364 aa15.21■□□□□ 0.03
LYSMD3-204ENST00000509384 BBOX1O75936 387 aa15.2■□□□□ 0.02
LYSMD3-204ENST00000509384 NPR1P16066 1061 aa15.2■□□□□ 0.02
LYSMD3-204ENST00000509384 RASGRF1Q13972 1273 aa15.2■□□□□ 0.02
LYSMD3-204ENST00000509384 VPS37DQ86XT2 251 aa15.2■□□□□ 0.02
LYSMD3-204ENST00000509384 LSG1Q9H089 658 aaKnown RBP15.2■□□□□ 0.02
LYSMD3-204ENST00000509384 GNL3LQ9NVN8 582 aaKnown RBP15.2■□□□□ 0.02
LYSMD3-204ENST00000509384 HMG20BQ9P0W2 317 aa15.2■□□□□ 0.02
LYSMD3-204ENST00000509384 ANKIB1Q9P2G1 1089 aa15.2■□□□□ 0.02
LYSMD3-204ENST00000509384 ZNF804BA4D1E1 1349 aa15.2■□□□□ 0.02
LYSMD3-204ENST00000509384 XDHP47989 1333 aa15.2■□□□□ 0.02
LYSMD3-204ENST00000509384 MED23Q9ULK4 1368 aa15.2■□□□□ 0.02
LYSMD3-204ENST00000509384 SRGNP10124 158 aa15.19■□□□□ 0.02
LYSMD3-204ENST00000509384 GYG1P46976 350 aa15.19■□□□□ 0.02
LYSMD3-204ENST00000509384 TMC4Q7Z404 712 aa15.19■□□□□ 0.02
LYSMD3-204ENST00000509384 SPATA5Q8NB90 893 aa15.19■□□□□ 0.02
LYSMD3-204ENST00000509384 TAF1P21675 1872 aa15.19■□□□□ 0.02
LYSMD3-204ENST00000509384 WTIPA6NIX2 430 aaPredicted RBP15.18■□□□□ 0.02
LYSMD3-204ENST00000509384 PPEF1O14829 653 aaPredicted RBP15.18■□□□□ 0.02
LYSMD3-204ENST00000509384 RNF113AO15541 343 aaKnown RBP15.18■□□□□ 0.02
LYSMD3-204ENST00000509384 CYP2E1P05181 493 aaPredicted RBP15.18■□□□□ 0.02
LYSMD3-204ENST00000509384 ZFYP08048 801 aaPredicted RBP15.18■□□□□ 0.02
LYSMD3-204ENST00000509384 BECN1Q14457 450 aa15.18■□□□□ 0.02
LYSMD3-204ENST00000509384 SLC16A10Q8TF71 515 aa15.18■□□□□ 0.02
LYSMD3-204ENST00000509384 KIF2CQ99661 725 aa15.18■□□□□ 0.02
LYSMD3-204ENST00000509384 PDGFDQ9GZP0 370 aaPredicted RBP15.18■□□□□ 0.02
LYSMD3-204ENST00000509384 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.18■□□□□ 0.02
LYSMD3-204ENST00000509384 DAXXQ9UER7 740 aaPredicted RBP15.18■□□□□ 0.02
LYSMD3-204ENST00000509384 LEMD3Q9Y2U8 911 aa15.18■□□□□ 0.02
LYSMD3-204ENST00000509384 A0A1B0GUL6 1792 aa15.18■□□□□ 0.02
LYSMD3-204ENST00000509384 CCDC171Q6TFL3 1326 aa15.18■□□□□ 0.02
LYSMD3-204ENST00000509384 MCMDC2Q4G0Z9 681 aa15.17■□□□□ 0.02
LYSMD3-204ENST00000509384 ZNF589Q86UQ0 364 aaPredicted RBP15.17■□□□□ 0.02
LYSMD3-204ENST00000509384 MASTLQ96GX5 879 aa15.17■□□□□ 0.02
LYSMD3-204ENST00000509384 HELLSQ9NRZ9 838 aa15.17■□□□□ 0.02
LYSMD3-204ENST00000509384 CHGBP05060 677 aa15.17■□□□□ 0.02
LYSMD3-204ENST00000509384 KLRK1P26718 216 aa15.17■□□□□ 0.02
LYSMD3-204ENST00000509384 GPSM2P81274 684 aa15.17■□□□□ 0.02
LYSMD3-204ENST00000509384 ZMYM1Q5SVZ6 1142 aa15.17■□□□□ 0.02
LYSMD3-204ENST00000509384 ZSCAN25Q6NSZ9 544 aa15.17■□□□□ 0.02
LYSMD3-204ENST00000509384 SLC51AQ86UW1 340 aa15.17■□□□□ 0.02
LYSMD3-204ENST00000509384 FAM84BQ96KN1 310 aaPredicted RBP15.17■□□□□ 0.02
LYSMD3-204ENST00000509384 PIH1D3Q9NQM4 214 aaKnown RBP15.17■□□□□ 0.02
LYSMD3-204ENST00000509384 ANKRD31Q8N7Z5 1873 aa15.16■□□□□ 0.02
LYSMD3-204ENST00000509384 IDH1O75874 414 aaKnown RBP15.16■□□□□ 0.02
LYSMD3-204ENST00000509384 ATP2B4P23634 1241 aa15.16■□□□□ 0.02
LYSMD3-204ENST00000509384 ALDH1B1P30837 517 aa15.16■□□□□ 0.02
LYSMD3-204ENST00000509384 HIBADHP31937 336 aaKnown RBP15.16■□□□□ 0.02
LYSMD3-204ENST00000509384 HSPA4P34932 840 aa15.16■□□□□ 0.02
LYSMD3-204ENST00000509384 ANAPC15P60006 121 aa15.16■□□□□ 0.02
LYSMD3-204ENST00000509384 PTH1RQ03431 593 aa15.16■□□□□ 0.02
LYSMD3-204ENST00000509384 RABEP1Q15276 862 aa15.16■□□□□ 0.02
LYSMD3-204ENST00000509384 FBXO33Q7Z6M2 555 aa15.16■□□□□ 0.02
LYSMD3-204ENST00000509384 C2CD5Q86YS7 1000 aa15.16■□□□□ 0.02
LYSMD3-204ENST00000509384 GGA1Q9UJY5 639 aa15.16■□□□□ 0.02
LYSMD3-204ENST00000509384 H0YIN7 160 aa15.15■□□□□ 0.02
LYSMD3-204ENST00000509384 SEMA3EO15041 775 aa15.15■□□□□ 0.02
LYSMD3-204ENST00000509384 UFL1O94874 794 aa15.15■□□□□ 0.02
LYSMD3-204ENST00000509384 WASHC4Q2M389 1173 aa15.15■□□□□ 0.02
LYSMD3-204ENST00000509384 SEC62Q99442 399 aaKnown RBP15.15■□□□□ 0.02
LYSMD3-204ENST00000509384 DENND2AQ9ULE3 1009 aa15.15■□□□□ 0.02
LYSMD3-204ENST00000509384 NSFL1CQ9UNZ2 370 aaKnown RBP15.15■□□□□ 0.02
LYSMD3-204ENST00000509384 IQSEC3Q9UPP2 1182 aaPredicted RBP15.15■□□□□ 0.02
LYSMD3-204ENST00000509384 FRAT2O75474 233 aaPredicted RBP15.14■□□□□ 0.01
LYSMD3-204ENST00000509384 MAP3K12Q12852 859 aa15.14■□□□□ 0.01
LYSMD3-204ENST00000509384 SLFNL1Q499Z3 407 aa15.14■□□□□ 0.01
LYSMD3-204ENST00000509384 SLC9C2Q5TAH2 1124 aa15.14■□□□□ 0.01
LYSMD3-204ENST00000509384 CCDC129Q6ZRS4 1044 aa15.14■□□□□ 0.01
LYSMD3-204ENST00000509384 SP8Q8IXZ3 490 aa15.14■□□□□ 0.01
LYSMD3-204ENST00000509384 APPBP2Q92624 585 aa15.14■□□□□ 0.01
LYSMD3-204ENST00000509384 ZNF622Q969S3 477 aaKnown RBP eCLIP15.14■□□□□ 0.011e-8■□□□□ 9.7
LYSMD3-204ENST00000509384 PODXL2Q9NZ53 605 aa15.14■□□□□ 0.01
LYSMD3-204ENST00000509384 PALD1Q9ULE6 856 aa15.14■□□□□ 0.01
LYSMD3-204ENST00000509384 ATP6V0A2Q9Y487 856 aa15.14■□□□□ 0.01
LYSMD3-204ENST00000509384 MAST3O60307 1309 aa15.14■□□□□ 0.01
LYSMD3-204ENST00000509384 IRS2Q9Y4H2 1338 aa15.14■□□□□ 0.01
LYSMD3-204ENST00000509384 COL1A1P02452 1464 aaPredicted RBP15.13■□□□□ 0.01
LYSMD3-204ENST00000509384 ADD2P35612 726 aa15.13■□□□□ 0.01
LYSMD3-204ENST00000509384 STYK1Q6J9G0 422 aa15.13■□□□□ 0.01
LYSMD3-204ENST00000509384 C15orf52Q6ZUT6 534 aaKnown RBP15.13■□□□□ 0.01
LYSMD3-204ENST00000509384 HSCBQ8IWL3 235 aa15.13■□□□□ 0.01
LYSMD3-204ENST00000509384 MAP4K1Q92918 833 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms