RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 CNNM1Q9NRU3 951 aa10.98□□□□□ -0.65
PDLIM5-213ENST00000509357 ABT1Q9ULW3 272 aaKnown RBP10.98□□□□□ -0.65
PDLIM5-213ENST00000509357 LEMD3Q9Y2U8 911 aa10.98□□□□□ -0.65
PDLIM5-213ENST00000509357 PASKQ96RG2 1323 aa10.98□□□□□ -0.65
PDLIM5-213ENST00000509357 SHTN1A0MZ66 631 aa10.97□□□□□ -0.65
PDLIM5-213ENST00000509357 RFX5P48382 616 aaPredicted RBP10.97□□□□□ -0.65
PDLIM5-213ENST00000509357 CHRNDQ07001 517 aa10.97□□□□□ -0.65
PDLIM5-213ENST00000509357 TBC1D10BQ4KMP7 808 aaPredicted RBP10.97□□□□□ -0.65
PDLIM5-213ENST00000509357 LDHAL6AQ6ZMR3 332 aa10.97□□□□□ -0.65
PDLIM5-213ENST00000509357 SAMD7Q7Z3H4 446 aa10.97□□□□□ -0.65
PDLIM5-213ENST00000509357 PODNQ7Z5L7 613 aa10.97□□□□□ -0.65
PDLIM5-213ENST00000509357 TRPM4Q8TD43 1214 aa10.97□□□□□ -0.65
PDLIM5-213ENST00000509357 ZNF594Q96JF6 807 aaPredicted RBP10.97□□□□□ -0.65
PDLIM5-213ENST00000509357 COG6Q9Y2V7 657 aa10.97□□□□□ -0.65
PDLIM5-213ENST00000509357 LRRFIP2Q9Y608 721 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-213ENST00000509357 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.97□□□□□ -0.65
PDLIM5-213ENST00000509357 ZNF804BA4D1E1 1349 aa10.97□□□□□ -0.65
PDLIM5-213ENST00000509357 MED23Q9ULK4 1368 aa10.96□□□□□ -0.65
PDLIM5-213ENST00000509357 USP17L3A6NCW0 530 aa10.96□□□□□ -0.65
PDLIM5-213ENST00000509357 USP17L4A6NCW7 530 aa10.96□□□□□ -0.65
PDLIM5-213ENST00000509357 IPO8O15397 1037 aaKnown RBP10.96□□□□□ -0.65
PDLIM5-213ENST00000509357 TAF5LO75529 589 aa10.96□□□□□ -0.65
PDLIM5-213ENST00000509357 VIL1P09327 827 aaKnown RBP10.96□□□□□ -0.65
PDLIM5-213ENST00000509357 RSBN1LQ6PCB5 846 aaPredicted RBP10.96□□□□□ -0.65
PDLIM5-213ENST00000509357 PAXIP1Q6ZW49 1069 aaPredicted RBP10.96□□□□□ -0.65
PDLIM5-213ENST00000509357 USP17L1Q7RTZ2 530 aa10.96□□□□□ -0.65
PDLIM5-213ENST00000509357 HELBQ8NG08 1087 aaPredicted RBP10.96□□□□□ -0.65
PDLIM5-213ENST00000509357 KLHDC4Q8TBB5 520 aa10.96□□□□□ -0.65
PDLIM5-213ENST00000509357 ZC3H15Q8WU90 426 aaKnown RBP10.96□□□□□ -0.65
PDLIM5-213ENST00000509357 ZNF408Q9H9D4 720 aa10.96□□□□□ -0.65
PDLIM5-213ENST00000509357 SCN9AQ15858 1988 aa10.96□□□□□ -0.66
PDLIM5-213ENST00000509357 SNAP23O00161 211 aa10.95□□□□□ -0.66
PDLIM5-213ENST00000509357 TRAF5O00463 557 aa10.95□□□□□ -0.66
PDLIM5-213ENST00000509357 MVPQ14764 893 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-213ENST00000509357 CDC37L1Q7L3B6 337 aa10.95□□□□□ -0.66
PDLIM5-213ENST00000509357 AGBL3Q8NEM8 1001 aa10.95□□□□□ -0.66
PDLIM5-213ENST00000509357 DCPSQ96C86 337 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-213ENST00000509357 GLIS2Q9BZE0 524 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-213ENST00000509357 PUS3Q9BZE2 481 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-213ENST00000509357 COA1Q9GZY4 146 aa10.95□□□□□ -0.66
PDLIM5-213ENST00000509357 PNMA6EA0A0J9YXQ4 647 aa10.94□□□□□ -0.66
PDLIM5-213ENST00000509357 USP17L8P0C7I0 530 aa10.94□□□□□ -0.66
PDLIM5-213ENST00000509357 HIRAP54198 1017 aaPredicted RBP10.94□□□□□ -0.66
PDLIM5-213ENST00000509357 FMR1Q06787 632 aaKnown RBP eCLIP10.94□□□□□ -0.66
PDLIM5-213ENST00000509357 GRM1Q13255 1194 aa10.94□□□□□ -0.66
PDLIM5-213ENST00000509357 KIF4BQ2VIQ3 1234 aa10.94□□□□□ -0.66
PDLIM5-213ENST00000509357 DEFB115Q30KQ5 88 aa10.94□□□□□ -0.66
PDLIM5-213ENST00000509357 USP48Q86UV5 1035 aa10.94□□□□□ -0.66
PDLIM5-213ENST00000509357 TXNRD3Q86VQ6 643 aa10.94□□□□□ -0.66
PDLIM5-213ENST00000509357 ITPRIPQ8IWB1 547 aa10.94□□□□□ -0.66
PDLIM5-213ENST00000509357 SIRT2Q8IXJ6 389 aa10.94□□□□□ -0.66
PDLIM5-213ENST00000509357 OGFOD1Q8N543 542 aa10.94□□□□□ -0.66
PDLIM5-213ENST00000509357 JMYQ8N9B5 988 aa10.94□□□□□ -0.66
PDLIM5-213ENST00000509357 SUPT16HQ9Y5B9 1047 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-213ENST00000509357 IRS2Q9Y4H2 1338 aa10.93□□□□□ -0.66
PDLIM5-213ENST00000509357 CELF2O95319 508 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-213ENST00000509357 KLRK1P26718 216 aa10.93□□□□□ -0.66
PDLIM5-213ENST00000509357 TTLL5Q6EMB2 1281 aa10.93□□□□□ -0.66
PDLIM5-213ENST00000509357 KRT26Q7Z3Y9 468 aa10.93□□□□□ -0.66
PDLIM5-213ENST00000509357 ZNF804AQ7Z570 1209 aa10.93□□□□□ -0.66
PDLIM5-213ENST00000509357 CRBNQ96SW2 442 aa10.93□□□□□ -0.66
PDLIM5-213ENST00000509357 ZBTB40Q9NUA8 1239 aa10.93□□□□□ -0.66
PDLIM5-213ENST00000509357 PA2G4Q9UQ80 394 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-213ENST00000509357 ARAP2Q8WZ64 1704 aa10.92□□□□□ -0.66
PDLIM5-213ENST00000509357 EGFRP00533 1210 aa10.92□□□□□ -0.66
PDLIM5-213ENST00000509357 UBTFL1P0CB47 393 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-213ENST00000509357 VEGFBP49765 207 aa10.92□□□□□ -0.66
PDLIM5-213ENST00000509357 GTF2IP78347 998 aa10.92□□□□□ -0.66
PDLIM5-213ENST00000509357 PTPN12Q05209 780 aaKnown RBP10.92□□□□□ -0.66
PDLIM5-213ENST00000509357 SCARF1Q14162 830 aa10.92□□□□□ -0.66
PDLIM5-213ENST00000509357 PDE3AQ14432 1141 aa10.92□□□□□ -0.66
PDLIM5-213ENST00000509357 LRRC24Q50LG9 513 aa10.92□□□□□ -0.66
PDLIM5-213ENST00000509357 STRIP1Q5VSL9 837 aa10.92□□□□□ -0.66
PDLIM5-213ENST00000509357 SULF1Q8IWU6 871 aa10.92□□□□□ -0.66
PDLIM5-213ENST00000509357 FTSJ3Q8IY81 847 aaKnown RBP10.92□□□□□ -0.66
PDLIM5-213ENST00000509357 MXD3Q9BW11 206 aa10.92□□□□□ -0.66
PDLIM5-213ENST00000509357 PGAP2Q9UHJ9 254 aa10.92□□□□□ -0.66
PDLIM5-213ENST00000509357 PSME4Q14997 1843 aa10.92□□□□□ -0.66
PDLIM5-213ENST00000509357 CNTNAP1P78357 1384 aa10.91□□□□□ -0.66
PDLIM5-213ENST00000509357 MYO3BQ8WXR4 1341 aa10.91□□□□□ -0.66
PDLIM5-213ENST00000509357 IRX6P78412 446 aaPredicted RBP10.91□□□□□ -0.66
PDLIM5-213ENST00000509357 MTX1Q13505 466 aa10.91□□□□□ -0.66
PDLIM5-213ENST00000509357 POLA2Q14181 598 aa10.91□□□□□ -0.66
PDLIM5-213ENST00000509357 METTL24Q5JXM2 366 aa10.91□□□□□ -0.66
PDLIM5-213ENST00000509357 CST9Q5W186 159 aa10.91□□□□□ -0.66
PDLIM5-213ENST00000509357 ATG9AQ7Z3C6 839 aa10.91□□□□□ -0.66
PDLIM5-213ENST00000509357 CD209Q9NNX6 404 aa10.91□□□□□ -0.66
PDLIM5-213ENST00000509357 MYOZ2Q9NPC6 264 aa10.91□□□□□ -0.66
PDLIM5-213ENST00000509357 GGA3Q9NZ52 723 aa10.91□□□□□ -0.66
PDLIM5-213ENST00000509357 HDAC9Q9UKV0 1011 aa10.91□□□□□ -0.66
PDLIM5-213ENST00000509357 HDAC5Q9UQL6 1122 aa10.91□□□□□ -0.66
PDLIM5-213ENST00000509357 PCNTO95613 3336 aa10.91□□□□□ -0.66
PDLIM5-213ENST00000509357 MROH5Q6ZUA9 1318 aa10.9□□□□□ -0.66
PDLIM5-213ENST00000509357 RASSF10A6NK89 507 aa10.9□□□□□ -0.66
PDLIM5-213ENST00000509357 HSPA1AP0DMV8 641 aaKnown RBP10.9□□□□□ -0.66
PDLIM5-213ENST00000509357 HSPA1BP0DMV9 641 aaKnown RBP10.9□□□□□ -0.66
PDLIM5-213ENST00000509357 ECE1P42892 770 aa10.9□□□□□ -0.66
PDLIM5-213ENST00000509357 ZNF280AP59817 542 aaPredicted RBP10.9□□□□□ -0.66
PDLIM5-213ENST00000509357 DACT2Q5SW24 774 aa10.9□□□□□ -0.66
PDLIM5-213ENST00000509357 ANGEL2Q5VTE6 544 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms