RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 CCDC152Q4G0S7 254 aa17.75■□□□□ 0.43
PHF3-209ENST00000509330 PARP10Q53GL7 1025 aa17.75■□□□□ 0.43
PHF3-209ENST00000509330 FBXO3Q9UK99 471 aa17.75■□□□□ 0.43
PHF3-209ENST00000509330 U3KPZ7 1027 aaPredicted RBP17.75■□□□□ 0.43
PHF3-209ENST00000509330 ANKRD36CQ5JPF3 1778 aa17.75■□□□□ 0.43
PHF3-209ENST00000509330 TOB2Q14106 344 aaPredicted RBP17.75■□□□□ 0.43
PHF3-209ENST00000509330 PIH1D3Q9NQM4 214 aaKnown RBP17.75■□□□□ 0.43
PHF3-209ENST00000509330 HELLSQ9NRZ9 838 aa17.75■□□□□ 0.43
PHF3-209ENST00000509330 IGHMBP2P38935 993 aaKnown RBP17.74■□□□□ 0.43
PHF3-209ENST00000509330 AEBP2Q6ZN18 517 aaPredicted RBP17.74■□□□□ 0.43
PHF3-209ENST00000509330 VPS37CA5D8V6 355 aaPredicted RBP17.74■□□□□ 0.43
PHF3-209ENST00000509330 NPHP1O15259 732 aa17.74■□□□□ 0.43
PHF3-209ENST00000509330 PUM3Q15397 648 aaKnown RBP17.74■□□□□ 0.43
PHF3-209ENST00000509330 SLC9C2Q5TAH2 1124 aa17.74■□□□□ 0.43
PHF3-209ENST00000509330 CAVIN1Q6NZI2 390 aaKnown RBP17.74■□□□□ 0.43
PHF3-209ENST00000509330 Q6ZUG5 572 aa17.74■□□□□ 0.43
PHF3-209ENST00000509330 LMBRD1Q9NUN5 540 aa17.74■□□□□ 0.43
PHF3-209ENST00000509330 RBM27Q9P2N5 1060 aaKnown RBP17.74■□□□□ 0.43
PHF3-209ENST00000509330 SYT1P21579 422 aa17.73■□□□□ 0.43
PHF3-209ENST00000509330 BCAMP50895 628 aa17.73■□□□□ 0.43
PHF3-209ENST00000509330 HMG20BQ9P0W2 317 aa17.73■□□□□ 0.43
PHF3-209ENST00000509330 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.73■□□□□ 0.43
PHF3-209ENST00000509330 SEPT12Q8IYM1 358 aa17.73■□□□□ 0.43
PHF3-209ENST00000509330 NSFL1CQ9UNZ2 370 aaKnown RBP17.73■□□□□ 0.43
PHF3-209ENST00000509330 FOSBP53539 338 aa17.73■□□□□ 0.43
PHF3-209ENST00000509330 BRF1Q92994 677 aa17.73■□□□□ 0.43
PHF3-209ENST00000509330 BCL2L12Q9HB09 334 aa17.73■□□□□ 0.43
PHF3-209ENST00000509330 SPATA31A6Q5VVP1 1343 aa17.72■□□□□ 0.43
PHF3-209ENST00000509330 GOLGA6L3A6NEY3 463 aa17.72■□□□□ 0.43
PHF3-209ENST00000509330 WWC3Q9ULE0 1092 aa17.72■□□□□ 0.43
PHF3-209ENST00000509330 LPIN2Q92539 896 aa17.72■□□□□ 0.43
PHF3-209ENST00000509330 ZPR1O75312 459 aa17.71■□□□□ 0.43
PHF3-209ENST00000509330 APPP05067 770 aa17.71■□□□□ 0.43
PHF3-209ENST00000509330 CHRNDQ07001 517 aa17.71■□□□□ 0.43
PHF3-209ENST00000509330 SLC51AQ86UW1 340 aa17.71■□□□□ 0.43
PHF3-209ENST00000509330 FERMT3Q86UX7 667 aa17.71■□□□□ 0.43
PHF3-209ENST00000509330 MYH3P11055 1940 aa17.71■□□□□ 0.43
PHF3-209ENST00000509330 RFX7Q2KHR2 1363 aa17.71■□□□□ 0.43
PHF3-209ENST00000509330 COL4A1P02462 1669 aa17.71■□□□□ 0.43
PHF3-209ENST00000509330 GPAA1O43292 621 aa17.71■□□□□ 0.43
PHF3-209ENST00000509330 STX6O43752 255 aa17.71■□□□□ 0.43
PHF3-209ENST00000509330 PANK2Q9BZ23 570 aa17.71■□□□□ 0.43
PHF3-209ENST00000509330 TAOK2Q9UL54 1235 aa17.71■□□□□ 0.43
PHF3-209ENST00000509330 MROH5Q6ZUA9 1318 aa17.71■□□□□ 0.43
PHF3-209ENST00000509330 SLC5A1P13866 664 aa17.7■□□□□ 0.42
PHF3-209ENST00000509330 RASGRF1Q13972 1273 aa17.7■□□□□ 0.42
PHF3-209ENST00000509330 CLEC17AQ6ZS10 378 aa17.7■□□□□ 0.42
PHF3-209ENST00000509330 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.7■□□□□ 0.42
PHF3-209ENST00000509330 ABCC12Q96J65 1359 aa17.7■□□□□ 0.42
PHF3-209ENST00000509330 GAS2L3Q86XJ1 694 aa17.7■□□□□ 0.42
PHF3-209ENST00000509330 RAB11FIP4Q86YS3 637 aa17.7■□□□□ 0.42
PHF3-209ENST00000509330 GPT2Q8TD30 523 aa17.7■□□□□ 0.42
PHF3-209ENST00000509330 GPHNQ9NQX3 736 aaPredicted RBP17.7■□□□□ 0.42
PHF3-209ENST00000509330 WDR33Q9C0J8 1336 aaKnown RBP17.7■□□□□ 0.42
PHF3-209ENST00000509330 E7EWF7 191 aa17.7■□□□□ 0.42
PHF3-209ENST00000509330 FOXP2O15409 715 aa17.7■□□□□ 0.42
PHF3-209ENST00000509330 JAK2O60674 1132 aa17.7■□□□□ 0.42
PHF3-209ENST00000509330 NBPF5PQ86XG9 351 aaPredicted RBP17.7■□□□□ 0.42
PHF3-209ENST00000509330 STK11IPQ8N1F8 1099 aa17.7■□□□□ 0.42
PHF3-209ENST00000509330 IL27Q8NEV9 243 aa17.7■□□□□ 0.42
PHF3-209ENST00000509330 CELF1Q92879 486 aaKnown RBP17.7■□□□□ 0.42
PHF3-209ENST00000509330 DDX11Q96FC9 970 aa17.7■□□□□ 0.42
PHF3-209ENST00000509330 RTCBQ9Y3I0 505 aaKnown RBP17.7■□□□□ 0.42
PHF3-209ENST00000509330 ZNF532Q9HCE3 1301 aa17.69■□□□□ 0.42
PHF3-209ENST00000509330 KRT32Q14532 448 aa17.69■□□□□ 0.42
PHF3-209ENST00000509330 APPBP2Q92624 585 aa17.69■□□□□ 0.42
PHF3-209ENST00000509330 ARHGEF1Q92888 912 aaKnown RBP17.69■□□□□ 0.42
PHF3-209ENST00000509330 ZSCAN31Q96LW9 406 aaPredicted RBP17.69■□□□□ 0.42
PHF3-209ENST00000509330 DSCC1Q9BVC3 393 aa17.69■□□□□ 0.42
PHF3-209ENST00000509330 SH2B1Q9NRF2 756 aaPredicted RBP17.69■□□□□ 0.42
PHF3-209ENST00000509330 FGAP02671 866 aa17.69■□□□□ 0.42
PHF3-209ENST00000509330 FGFR2P21802 821 aa17.69■□□□□ 0.42
PHF3-209ENST00000509330 APOBRQ0VD83 1088 aa17.69■□□□□ 0.42
PHF3-209ENST00000509330 SKOR2Q2VWA4 1001 aaPredicted RBP17.69■□□□□ 0.42
PHF3-209ENST00000509330 SETDB2Q96T68 719 aa17.69■□□□□ 0.42
PHF3-209ENST00000509330 DENND2AQ9ULE3 1009 aa17.69■□□□□ 0.42
PHF3-209ENST00000509330 CNPY2Q9Y2B0 182 aa17.69■□□□□ 0.42
PHF3-209ENST00000509330 GYG1P46976 350 aa17.68■□□□□ 0.42
PHF3-209ENST00000509330 CCT2P78371 535 aaKnown RBP17.68■□□□□ 0.42
PHF3-209ENST00000509330 FAM173BQ6P4H8 233 aa17.68■□□□□ 0.42
PHF3-209ENST00000509330 SPATA5Q8NB90 893 aa17.68■□□□□ 0.42
PHF3-209ENST00000509330 RTN4Q9NQC3 1192 aaKnown RBP17.68■□□□□ 0.42
PHF3-209ENST00000509330 FAM196AQ6ZSG2 479 aa17.68■□□□□ 0.42
PHF3-209ENST00000509330 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.68■□□□□ 0.42
PHF3-209ENST00000509330 TAF1P21675 1872 aa17.68■□□□□ 0.42
PHF3-209ENST00000509330 FIBPO43427 364 aa17.67■□□□□ 0.42
PHF3-209ENST00000509330 GADD45BO75293 160 aaPredicted RBP17.67■□□□□ 0.42
PHF3-209ENST00000509330 ZSCAN22P10073 491 aaPredicted RBP17.67■□□□□ 0.42
PHF3-209ENST00000509330 ANKRD18AQ8IVF6 992 aa17.67■□□□□ 0.42
PHF3-209ENST00000509330 MAGEB6Q8N7X4 407 aa17.67■□□□□ 0.42
PHF3-209ENST00000509330 QTRT2Q9H974 415 aaKnown RBP17.67■□□□□ 0.42
PHF3-209ENST00000509330 CNTNAP4Q9C0A0 1308 aa17.67■□□□□ 0.42
PHF3-209ENST00000509330 RPS6KA4O75676 772 aa17.67■□□□□ 0.42
PHF3-209ENST00000509330 KLHL40Q2TBA0 621 aa17.67■□□□□ 0.42
PHF3-209ENST00000509330 TSGA10IPQ3SY00 556 aa17.67■□□□□ 0.42
PHF3-209ENST00000509330 CLEC4GQ6UXB4 293 aa17.67■□□□□ 0.42
PHF3-209ENST00000509330 PDE6AP16499 860 aa17.67■□□□□ 0.42
PHF3-209ENST00000509330 ADD2P35612 726 aa17.67■□□□□ 0.42
PHF3-209ENST00000509330 LARP1BQ659C4 914 aaKnown RBP17.67■□□□□ 0.42
PHF3-209ENST00000509330 NCOA5Q9HCD5 579 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms