RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, human

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-208	ENST00000509177	TBC1D16	Q8TBP0	767 aa		13.79	□□□□□ -0.2
TUSC3-208	ENST00000509177	CCDC102A	Q96A19	550 aa		13.79	□□□□□ -0.2
TUSC3-208	ENST00000509177	DCPS	Q96C86	337 aa	Known RBP	13.79	□□□□□ -0.2
TUSC3-208	ENST00000509177	RNF186	Q9NXI6	227 aa		13.79	□□□□□ -0.2
TUSC3-208	ENST00000509177	ASTN2	O75129	1339 aa	Predicted RBP	13.79	□□□□□ -0.2
TUSC3-208	ENST00000509177		H7C1W4	665 aa		13.78	□□□□□ -0.2
TUSC3-208	ENST00000509177	GREM2	Q9H772	168 aa		13.78	□□□□□ -0.2
TUSC3-208	ENST00000509177	PCDH10	Q9P2E7	1040 aa		13.78	□□□□□ -0.2
TUSC3-208	ENST00000509177	SCN9A	Q15858	1988 aa		13.78	□□□□□ -0.2
TUSC3-208	ENST00000509177		F6X3S4	739 aa		13.77	□□□□□ -0.21
TUSC3-208	ENST00000509177	SLC10A3	P09131	477 aa		13.77	□□□□□ -0.21
TUSC3-208	ENST00000509177	VIL1	P09327	827 aa	Known RBP	13.77	□□□□□ -0.21
TUSC3-208	ENST00000509177	SOX10	P56693	466 aa		13.77	□□□□□ -0.21
TUSC3-208	ENST00000509177	KIF4B	Q2VIQ3	1234 aa		13.77	□□□□□ -0.21
TUSC3-208	ENST00000509177	CSRNP1	Q96S65	589 aa		13.77	□□□□□ -0.21
TUSC3-208	ENST00000509177	GGA3	Q9NZ52	723 aa		13.77	□□□□□ -0.21
TUSC3-208	ENST00000509177	PODXL2	Q9NZ53	605 aa		13.77	□□□□□ -0.21
TUSC3-208	ENST00000509177	XDH	P47989	1333 aa		13.76	□□□□□ -0.21
TUSC3-208	ENST00000509177	ATP2B4	P23634	1241 aa		13.76	□□□□□ -0.21
TUSC3-208	ENST00000509177	IGHMBP2	P38935	993 aa	Known RBP	13.76	□□□□□ -0.21
TUSC3-208	ENST00000509177	SLC4A10	Q6U841	1118 aa		13.76	□□□□□ -0.21
TUSC3-208	ENST00000509177	AKAP11	Q9UKA4	1901 aa		13.75	□□□□□ -0.21
TUSC3-208	ENST00000509177		E9PSI1	815 aa		13.75	□□□□□ -0.21
TUSC3-208	ENST00000509177	SULF1	Q8IWU6	871 aa		13.75	□□□□□ -0.21
TUSC3-208	ENST00000509177	CDCA5	Q96FF9	252 aa		13.75	□□□□□ -0.21
TUSC3-208	ENST00000509177	MPHOSPH8	Q99549	860 aa		13.75	□□□□□ -0.21
TUSC3-208	ENST00000509177	BSDC1	Q9NW68	430 aa	Predicted RBP	13.75	□□□□□ -0.21
TUSC3-208	ENST00000509177	CHMP3	Q9Y3E7	222 aa		13.75	□□□□□ -0.21
TUSC3-208	ENST00000509177	CCER2	I3L3R5	266 aa		13.74	□□□□□ -0.21
TUSC3-208	ENST00000509177	ITGA6	P23229	1130 aa		13.74	□□□□□ -0.21
TUSC3-208	ENST00000509177	SCARF1	Q14162	830 aa		13.74	□□□□□ -0.21
TUSC3-208	ENST00000509177	BEND3	Q5T5X7	828 aa		13.74	□□□□□ -0.21
TUSC3-208	ENST00000509177	PLA2G12B	Q9BX93	195 aa		13.74	□□□□□ -0.21
TUSC3-208	ENST00000509177	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.74	□□□□□ -0.21
TUSC3-208	ENST00000509177	ZNF521	Q96K83	1311 aa		13.73	□□□□□ -0.21
TUSC3-208	ENST00000509177	ANKRD18B	A2A2Z9	1011 aa		13.73	□□□□□ -0.21
TUSC3-208	ENST00000509177	ZNF280A	P59817	542 aa	Predicted RBP	13.73	□□□□□ -0.21
TUSC3-208	ENST00000509177	ANGEL2	Q5VTE6	544 aa	Known RBP	13.73	□□□□□ -0.21
TUSC3-208	ENST00000509177	CTU1	Q7Z7A3	348 aa	Known RBP	13.73	□□□□□ -0.21
TUSC3-208	ENST00000509177	RASAL3	Q86YV0	1011 aa		13.73	□□□□□ -0.21
TUSC3-208	ENST00000509177	MINPP1	Q9UNW1	487 aa		13.73	□□□□□ -0.21
TUSC3-208	ENST00000509177	ZNF609	O15014	1411 aa		13.73	□□□□□ -0.21
TUSC3-208	ENST00000509177	KCNJ4	P48050	445 aa		13.72	□□□□□ -0.21
TUSC3-208	ENST00000509177	CASP7	P55210	303 aa		13.72	□□□□□ -0.21
TUSC3-208	ENST00000509177	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.72	□□□□□ -0.21
TUSC3-208	ENST00000509177	SRCIN1	Q9C0H9	1055 aa		13.72	□□□□□ -0.21
TUSC3-208	ENST00000509177	ANKRD2	Q9GZV1	360 aa		13.72	□□□□□ -0.21
TUSC3-208	ENST00000509177	GRM8	O00222	908 aa		13.71	□□□□□ -0.21
TUSC3-208	ENST00000509177	ALDH1L1	O75891	902 aa		13.71	□□□□□ -0.21
TUSC3-208	ENST00000509177	CSF1R	P07333	972 aa		13.71	□□□□□ -0.21
TUSC3-208	ENST00000509177	CCT4	P50991	539 aa	Known RBP	13.71	□□□□□ -0.21
TUSC3-208	ENST00000509177	SLFN5	Q08AF3	891 aa		13.71	□□□□□ -0.21
TUSC3-208	ENST00000509177	IFIT5	Q13325	482 aa	Known RBP	13.71	□□□□□ -0.21
TUSC3-208	ENST00000509177	TAF7L	Q5H9L4	462 aa		13.71	□□□□□ -0.21
TUSC3-208	ENST00000509177	MOB2	Q70IA6	237 aa		13.71	□□□□□ -0.21
TUSC3-208	ENST00000509177	AGBL3	Q8NEM8	1001 aa		13.71	□□□□□ -0.21
TUSC3-208	ENST00000509177	FBXW7	Q969H0	707 aa		13.71	□□□□□ -0.21
TUSC3-208	ENST00000509177	GML	Q99445	158 aa		13.71	□□□□□ -0.21
TUSC3-208	ENST00000509177	SCAF8	Q9UPN6	1271 aa	Known RBP	13.71	□□□□□ -0.21
TUSC3-208	ENST00000509177	FKBP1B	P68106	108 aa		13.7	□□□□□ -0.22
TUSC3-208	ENST00000509177	LMBR1L	Q6UX01	489 aa		13.7	□□□□□ -0.22
TUSC3-208	ENST00000509177	PODN	Q7Z5L7	613 aa		13.7	□□□□□ -0.22
TUSC3-208	ENST00000509177	REM2	Q8IYK8	340 aa	Predicted RBP	13.7	□□□□□ -0.22
TUSC3-208	ENST00000509177	MRPL50	Q8N5N7	158 aa	Known RBP	13.7	□□□□□ -0.22
TUSC3-208	ENST00000509177	CDCA7L	Q96GN5	454 aa		13.7	□□□□□ -0.22
TUSC3-208	ENST00000509177	MYOZ2	Q9NPC6	264 aa		13.7	□□□□□ -0.22
TUSC3-208	ENST00000509177	HPS5	Q9UPZ3	1129 aa		13.7	□□□□□ -0.22
TUSC3-208	ENST00000509177	LEMD3	Q9Y2U8	911 aa		13.7	□□□□□ -0.22
TUSC3-208	ENST00000509177	CACNA1F	O60840	1977 aa		13.7	□□□□□ -0.22
TUSC3-208	ENST00000509177	PAPPA2	Q9BXP8	1791 aa		13.7	□□□□□ -0.22
TUSC3-208	ENST00000509177	PSME4	Q14997	1843 aa		13.69	□□□□□ -0.22
TUSC3-208	ENST00000509177	USP17L3	A6NCW0	530 aa		13.69	□□□□□ -0.22
TUSC3-208	ENST00000509177	USP17L4	A6NCW7	530 aa		13.69	□□□□□ -0.22
TUSC3-208	ENST00000509177	WTIP	A6NIX2	430 aa	Predicted RBP	13.69	□□□□□ -0.22
TUSC3-208	ENST00000509177	USP17L8	P0C7I0	530 aa		13.69	□□□□□ -0.22
TUSC3-208	ENST00000509177	FOXO4	P98177	505 aa		13.69	□□□□□ -0.22
TUSC3-208	ENST00000509177	CCDC57	Q2TAC2	916 aa		13.69	□□□□□ -0.22
TUSC3-208	ENST00000509177	USP17L1	Q7RTZ2	530 aa		13.69	□□□□□ -0.22
TUSC3-208	ENST00000509177	ZNF804B	A4D1E1	1349 aa		13.68	□□□□□ -0.22
TUSC3-208	ENST00000509177	PITPNM2	Q9BZ72	1349 aa		13.68	□□□□□ -0.22
TUSC3-208	ENST00000509177	TBC1D8	O95759	1140 aa		13.68	□□□□□ -0.22
TUSC3-208	ENST00000509177	CHRND	Q07001	517 aa		13.68	□□□□□ -0.22
TUSC3-208	ENST00000509177	PRPF38B	Q5VTL8	546 aa	Known RBP	13.68	□□□□□ -0.22
TUSC3-208	ENST00000509177	PRAMEF18	Q5VWM3	479 aa		13.68	□□□□□ -0.22
TUSC3-208	ENST00000509177	SSH1	Q8WYL5	1049 aa		13.68	□□□□□ -0.22
TUSC3-208	ENST00000509177	MED23	Q9ULK4	1368 aa		13.68	□□□□□ -0.22
TUSC3-208	ENST00000509177	MKI67	P46013	3256 aa	Known RBP	13.68	□□□□□ -0.22
TUSC3-208	ENST00000509177	PTPRC	P08575	1304 aa		13.67	□□□□□ -0.22
TUSC3-208	ENST00000509177	UBE2Q2L	H0YL09	131 aa		13.67	□□□□□ -0.22
TUSC3-208	ENST00000509177	NBPF9	Q3BBW0	867 aa		13.67	□□□□□ -0.22
TUSC3-208	ENST00000509177	HELB	Q8NG08	1087 aa	Predicted RBP	13.67	□□□□□ -0.22
TUSC3-208	ENST00000509177	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.67	□□□□□ -0.22
TUSC3-208	ENST00000509177	CNNM1	Q9NRU3	951 aa		13.67	□□□□□ -0.22
TUSC3-208	ENST00000509177	SMC4	Q9NTJ3	1288 aa		13.67	□□□□□ -0.22
TUSC3-208	ENST00000509177	HTT	P42858	3142 aa		13.67	□□□□□ -0.22
TUSC3-208	ENST00000509177	ZBTB22	O15209	634 aa		13.66	□□□□□ -0.22
TUSC3-208	ENST00000509177	PLIN1	O60240	522 aa		13.66	□□□□□ -0.22
TUSC3-208	ENST00000509177	TAF5L	O75529	589 aa		13.66	□□□□□ -0.22
TUSC3-208	ENST00000509177	PKN2	Q16513	984 aa	Known RBP	13.66	□□□□□ -0.22
TUSC3-208	ENST00000509177	ALDH1L2	Q3SY69	923 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms