RNA–Protein interactions for RNA: ENST00000508838.5

AFP-204, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-204ENST00000508838 ERBB4Q15303 1308 aa7.34□□□□□ -1.23
AFP-204ENST00000508838 HTATSF1O43719 755 aaKnown RBP7.34□□□□□ -1.23
AFP-204ENST00000508838 LMOD1P29536 600 aaPredicted RBP7.34□□□□□ -1.23
AFP-204ENST00000508838 DGKZQ13574 1117 aa7.34□□□□□ -1.23
AFP-204ENST00000508838 TAF7Q15545 349 aaPredicted RBP7.34□□□□□ -1.23
AFP-204ENST00000508838 SAMD7Q7Z3H4 446 aa7.34□□□□□ -1.23
AFP-204ENST00000508838 NLRP10Q86W26 655 aa7.34□□□□□ -1.23
AFP-204ENST00000508838 MICALL2Q8IY33 904 aa7.34□□□□□ -1.23
AFP-204ENST00000508838 RPGRQ92834 1020 aaKnown RBP7.34□□□□□ -1.23
AFP-204ENST00000508838 CELF1Q92879 486 aaKnown RBP7.34□□□□□ -1.23
AFP-204ENST00000508838 NYXQ9GZU5 481 aa7.34□□□□□ -1.23
AFP-204ENST00000508838 ZNRF3Q9ULT6 936 aa7.34□□□□□ -1.23
AFP-204ENST00000508838 CACNA1FO60840 1977 aa7.33□□□□□ -1.24
AFP-204ENST00000508838 PTPRFP10586 1907 aa7.33□□□□□ -1.24
AFP-204ENST00000508838 MYH13Q9UKX3 1938 aa7.33□□□□□ -1.24
AFP-204ENST00000508838 PSMD14O00487 310 aa7.33□□□□□ -1.24
AFP-204ENST00000508838 SLC10A3P09131 477 aa7.33□□□□□ -1.24
AFP-204ENST00000508838 U2AF1L5P0DN76 240 aaPredicted RBP7.33□□□□□ -1.24
AFP-204ENST00000508838 HCLS1P14317 486 aaPredicted RBP7.33□□□□□ -1.24
AFP-204ENST00000508838 PTPN5P54829 565 aa7.33□□□□□ -1.24
AFP-204ENST00000508838 U2AF1Q01081 240 aaKnown RBP eCLIP7.33□□□□□ -1.24
AFP-204ENST00000508838 CAP1Q01518 475 aa7.33□□□□□ -1.24
AFP-204ENST00000508838 RASAL3Q86YV0 1011 aa7.33□□□□□ -1.24
AFP-204ENST00000508838 UNC80Q8N2C7 3258 aa7.33□□□□□ -1.24
AFP-204ENST00000508838 SPTBN5Q9NRC6 3674 aaKnown RBP7.32□□□□□ -1.24
AFP-204ENST00000508838 WTIPA6NIX2 430 aaPredicted RBP7.32□□□□□ -1.24
AFP-204ENST00000508838 CA12O43570 354 aa7.32□□□□□ -1.24
AFP-204ENST00000508838 HUNKP57058 714 aa7.32□□□□□ -1.24
AFP-204ENST00000508838 NOGQ13253 232 aa7.32□□□□□ -1.24
AFP-204ENST00000508838 NFE2L2Q16236 605 aa7.32□□□□□ -1.24
AFP-204ENST00000508838 KIF6Q6ZMV9 814 aa7.32□□□□□ -1.24
AFP-204ENST00000508838 RBM17Q96I25 401 aaKnown RBP7.32□□□□□ -1.24
AFP-204ENST00000508838 ZNF408Q9H9D4 720 aa7.32□□□□□ -1.24
AFP-204ENST00000508838 DBNDD1Q9H9R9 158 aa7.32□□□□□ -1.24
AFP-204ENST00000508838 POLLQ9UGP5 575 aa7.32□□□□□ -1.24
AFP-204ENST00000508838 RRP7AQ9Y3A4 280 aaKnown RBP7.32□□□□□ -1.24
AFP-204ENST00000508838 MGAMO43451 1857 aa7.32□□□□□ -1.24
AFP-204ENST00000508838 EYSQ5T1H1 3165 aa7.32□□□□□ -1.24
AFP-204ENST00000508838 A0A0C4DFX4 3053 aa7.31□□□□□ -1.24
AFP-204ENST00000508838 GPSM2P81274 684 aa7.31□□□□□ -1.24
AFP-204ENST00000508838 GRAPQ13588 217 aa7.31□□□□□ -1.24
AFP-204ENST00000508838 TBC1D10BQ4KMP7 808 aaPredicted RBP7.31□□□□□ -1.24
AFP-204ENST00000508838 PARP10Q53GL7 1025 aa7.31□□□□□ -1.24
AFP-204ENST00000508838 MOB2Q70IA6 237 aa7.31□□□□□ -1.24
AFP-204ENST00000508838 USP48Q86UV5 1035 aa7.31□□□□□ -1.24
AFP-204ENST00000508838 SP8Q8IXZ3 490 aa7.31□□□□□ -1.24
AFP-204ENST00000508838 GRAPLQ8TC17 118 aaPredicted RBP7.31□□□□□ -1.24
AFP-204ENST00000508838 ZC3H15Q8WU90 426 aaKnown RBP7.31□□□□□ -1.24
AFP-204ENST00000508838 KHSRPQ92945 711 aaKnown RBP eCLIP7.31□□□□□ -1.241e-18■■■□□ 15
AFP-204ENST00000508838 GMLQ99445 158 aa7.31□□□□□ -1.24
AFP-204ENST00000508838 RNF186Q9NXI6 227 aa7.31□□□□□ -1.24
AFP-204ENST00000508838 SAGE1Q9NXZ1 904 aa7.31□□□□□ -1.24
AFP-204ENST00000508838 GGA3Q9NZ52 723 aa7.31□□□□□ -1.24
AFP-204ENST00000508838 CNOT7Q9UIV1 285 aaKnown RBP7.31□□□□□ -1.24
AFP-204ENST00000508838 SCAF8Q9UPN6 1271 aaKnown RBP7.31□□□□□ -1.24
AFP-204ENST00000508838 VCANP13611 3396 aa7.31□□□□□ -1.24
AFP-204ENST00000508838 LAMA2P24043 3122 aaKnown RBP7.3□□□□□ -1.24
AFP-204ENST00000508838 KIF23Q02241 960 aaPredicted RBP7.3□□□□□ -1.24
AFP-204ENST00000508838 GRIPAP1Q4V328 841 aa7.3□□□□□ -1.24
AFP-204ENST00000508838 RGMBQ6NW40 437 aa7.3□□□□□ -1.24
AFP-204ENST00000508838 DPP8Q6V1X1 898 aaPredicted RBP7.3□□□□□ -1.24
AFP-204ENST00000508838 XAGE3Q8WTP9 111 aa7.3□□□□□ -1.24
AFP-204ENST00000508838 RTF1Q92541 710 aaKnown RBP7.3□□□□□ -1.24
AFP-204ENST00000508838 CDCA5Q96FF9 252 aa7.3□□□□□ -1.24
AFP-204ENST00000508838 CSRNP1Q96S65 589 aa7.3□□□□□ -1.24
AFP-204ENST00000508838 ISCA1Q9BUE6 129 aa7.3□□□□□ -1.24
AFP-204ENST00000508838 UTP14AQ9BVJ6 771 aaKnown RBP7.3□□□□□ -1.24
AFP-204ENST00000508838 VPS33BQ9H267 617 aa7.3□□□□□ -1.24
AFP-204ENST00000508838 R3HDMLQ9H3Y0 253 aa7.3□□□□□ -1.24
AFP-204ENST00000508838 GBA2Q9HCG7 927 aaPredicted RBP7.3□□□□□ -1.24
AFP-204ENST00000508838 ECE2O60344 883 aa7.29□□□□□ -1.24
AFP-204ENST00000508838 PRPF38BQ5VTL8 546 aaKnown RBP7.29□□□□□ -1.24
AFP-204ENST00000508838 CDC37L1Q7L3B6 337 aa7.29□□□□□ -1.24
AFP-204ENST00000508838 KRT26Q7Z3Y9 468 aa7.29□□□□□ -1.24
AFP-204ENST00000508838 MPNDQ8N594 471 aa7.29□□□□□ -1.24
AFP-204ENST00000508838 DPF2Q92785 391 aa7.29□□□□□ -1.24
AFP-204ENST00000508838 HPS5Q9UPZ3 1129 aa7.29□□□□□ -1.24
AFP-204ENST00000508838 CDH23Q9H251 3354 aa7.29□□□□□ -1.24
AFP-204ENST00000508838 PHIPQ8WWQ0 1821 aa7.29□□□□□ -1.24
AFP-204ENST00000508838 AOX1Q06278 1338 aa7.28□□□□□ -1.24
AFP-204ENST00000508838 SH3TC1Q8TE82 1336 aa7.28□□□□□ -1.24
AFP-204ENST00000508838 IRS2Q9Y4H2 1338 aa7.28□□□□□ -1.24
AFP-204ENST00000508838 HRO43593 1189 aa7.28□□□□□ -1.24
AFP-204ENST00000508838 GFRA3O60609 400 aa7.28□□□□□ -1.24
AFP-204ENST00000508838 GTF2E1P29083 439 aaPredicted RBP7.28□□□□□ -1.24
AFP-204ENST00000508838 ZNF280AP59817 542 aaPredicted RBP7.28□□□□□ -1.24
AFP-204ENST00000508838 TCIRG1Q13488 830 aa7.28□□□□□ -1.24
AFP-204ENST00000508838 SF3B3Q15393 1217 aaKnown RBP7.28□□□□□ -1.24
AFP-204ENST00000508838 KIF4BQ2VIQ3 1234 aa7.28□□□□□ -1.24
AFP-204ENST00000508838 COPS6Q7L5N1 327 aa7.28□□□□□ -1.24
AFP-204ENST00000508838 TBC1D16Q8TBP0 767 aa7.28□□□□□ -1.24
AFP-204ENST00000508838 NECTIN2Q92692 538 aa7.28□□□□□ -1.24
AFP-204ENST00000508838 CFAP53Q96M91 514 aa7.28□□□□□ -1.24
AFP-204ENST00000508838 NLRP3Q96P20 1036 aa7.28□□□□□ -1.24
AFP-204ENST00000508838 SEC31BQ9NQW1 1179 aa7.28□□□□□ -1.24
AFP-204ENST00000508838 CHPF2Q9P2E5 772 aa7.28□□□□□ -1.24
AFP-204ENST00000508838 TRPA1O75762 1119 aa7.27□□□□□ -1.25
AFP-204ENST00000508838 BBOX1O75936 387 aa7.27□□□□□ -1.25
AFP-204ENST00000508838 VIL1P09327 827 aaKnown RBP7.27□□□□□ -1.25
AFP-204ENST00000508838 PPP1R42Q7Z4L9 355 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms