RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 ZNF622Q969S3 477 aaKnown RBP eCLIP11.58□□□□□ -0.56
COL4A3BP-206ENST00000508809 TBC1D2BQ9UPU7 963 aa11.58□□□□□ -0.56
COL4A3BP-206ENST00000508809 LTBP3Q9NS15 1303 aa11.58□□□□□ -0.56
COL4A3BP-206ENST00000508809 TIAM2Q8IVF5 1701 aa11.57□□□□□ -0.56
COL4A3BP-206ENST00000508809 COL3A1P02461 1466 aaPredicted RBP11.57□□□□□ -0.56
COL4A3BP-206ENST00000508809 CEMIPQ8WUJ3 1361 aa11.57□□□□□ -0.56
COL4A3BP-206ENST00000508809 C21orf2O43822 256 aa11.57□□□□□ -0.56
COL4A3BP-206ENST00000508809 CAMTA2O94983 1202 aa11.57□□□□□ -0.56
COL4A3BP-206ENST00000508809 A1BGP04217 495 aa11.57□□□□□ -0.56
COL4A3BP-206ENST00000508809 SH3D19Q5HYK7 790 aa11.57□□□□□ -0.56
COL4A3BP-206ENST00000508809 CC2D1BQ5T0F9 858 aaKnown RBP11.57□□□□□ -0.56
COL4A3BP-206ENST00000508809 DESI1Q6ICB0 168 aa11.57□□□□□ -0.56
COL4A3BP-206ENST00000508809 ZNF598Q86UK7 904 aaKnown RBP11.57□□□□□ -0.56
COL4A3BP-206ENST00000508809 NUDT12Q9BQG2 462 aa11.57□□□□□ -0.56
COL4A3BP-206ENST00000508809 POLR3EQ9NVU0 708 aa11.57□□□□□ -0.56
COL4A3BP-206ENST00000508809 PCDHB15Q9Y5E8 787 aa11.57□□□□□ -0.56
COL4A3BP-206ENST00000508809 SLX4Q8IY92 1834 aa11.57□□□□□ -0.56
COL4A3BP-206ENST00000508809 SRGNP10124 158 aa11.56□□□□□ -0.56
COL4A3BP-206ENST00000508809 ERFEQ4G0M1 354 aa11.56□□□□□ -0.56
COL4A3BP-206ENST00000508809 PLA2G2CQ5R387 149 aa11.56□□□□□ -0.56
COL4A3BP-206ENST00000508809 ZNF697Q5TEC3 545 aa11.56□□□□□ -0.56
COL4A3BP-206ENST00000508809 LIAT1Q6ZQX7 453 aa11.56□□□□□ -0.56
COL4A3BP-206ENST00000508809 CNKSR1Q969H4 720 aa11.56□□□□□ -0.56
COL4A3BP-206ENST00000508809 FMNL2Q96PY5 1086 aa11.56□□□□□ -0.56
COL4A3BP-206ENST00000508809 SETDB2Q96T68 719 aa11.56□□□□□ -0.56
COL4A3BP-206ENST00000508809 LIMD1Q9UGP4 676 aa11.56□□□□□ -0.56
COL4A3BP-206ENST00000508809 SCN7AQ01118 1682 aa11.55□□□□□ -0.56
COL4A3BP-206ENST00000508809 COL11A2P13942 1736 aaPredicted RBP11.55□□□□□ -0.56
COL4A3BP-206ENST00000508809 SKIV2LQ15477 1246 aaKnown RBP11.55□□□□□ -0.56
COL4A3BP-206ENST00000508809 STYK1Q6J9G0 422 aa11.55□□□□□ -0.56
COL4A3BP-206ENST00000508809 CLEC4GQ6UXB4 293 aa11.55□□□□□ -0.56
COL4A3BP-206ENST00000508809 C7orf43Q8WVR3 580 aa11.55□□□□□ -0.56
COL4A3BP-206ENST00000508809 KLRG2A4D1S0 409 aaPredicted RBP11.54□□□□□ -0.56
COL4A3BP-206ENST00000508809 U2SURPO15042 1029 aaKnown RBP11.54□□□□□ -0.56
COL4A3BP-206ENST00000508809 KCNQ3O43525 872 aa11.54□□□□□ -0.56
COL4A3BP-206ENST00000508809 HSPA1AP0DMV8 641 aaKnown RBP11.54□□□□□ -0.56
COL4A3BP-206ENST00000508809 HSPA1BP0DMV9 641 aaKnown RBP11.54□□□□□ -0.56
COL4A3BP-206ENST00000508809 PTPRNQ16849 979 aa11.54□□□□□ -0.56
COL4A3BP-206ENST00000508809 SOGA3Q5TF21 947 aa11.54□□□□□ -0.56
COL4A3BP-206ENST00000508809 TNS4Q8IZW8 715 aa11.54□□□□□ -0.56
COL4A3BP-206ENST00000508809 CNBD1Q8NA66 436 aa11.54□□□□□ -0.56
COL4A3BP-206ENST00000508809 CCER1Q8TC90 406 aaPredicted RBP11.54□□□□□ -0.56
COL4A3BP-206ENST00000508809 MASTLQ96GX5 879 aa11.54□□□□□ -0.56
COL4A3BP-206ENST00000508809 PHACTR3Q96KR7 559 aa11.54□□□□□ -0.56
COL4A3BP-206ENST00000508809 TAOK3Q9H2K8 898 aa11.54□□□□□ -0.56
COL4A3BP-206ENST00000508809 USP16Q9Y5T5 823 aa11.54□□□□□ -0.56
COL4A3BP-206ENST00000508809 ARFGEF2Q9Y6D5 1785 aa11.54□□□□□ -0.56
COL4A3BP-206ENST00000508809 BTBD11A6QL63 1104 aa11.53□□□□□ -0.56
COL4A3BP-206ENST00000508809 CCNYL3P0C7X3 344 aa11.53□□□□□ -0.56
COL4A3BP-206ENST00000508809 BRPF1P55201 1214 aaPredicted RBP11.53□□□□□ -0.56
COL4A3BP-206ENST00000508809 ST5P78524 1137 aa11.53□□□□□ -0.56
COL4A3BP-206ENST00000508809 PRPF40BQ6NWY9 871 aaKnown RBP11.53□□□□□ -0.56
COL4A3BP-206ENST00000508809 HELBQ8NG08 1087 aaPredicted RBP11.53□□□□□ -0.56
COL4A3BP-206ENST00000508809 TSC1Q92574 1164 aa11.53□□□□□ -0.56
COL4A3BP-206ENST00000508809 ZNF330Q9Y3S2 320 aaPredicted RBP11.53□□□□□ -0.56
COL4A3BP-206ENST00000508809 BCORQ6W2J9 1755 aa11.52□□□□□ -0.57
COL4A3BP-206ENST00000508809 SCN4AP35499 1836 aa11.52□□□□□ -0.57
COL4A3BP-206ENST00000508809 GFRA3O60609 400 aa11.52□□□□□ -0.57
COL4A3BP-206ENST00000508809 DDNO94850 711 aaPredicted RBP11.52□□□□□ -0.57
COL4A3BP-206ENST00000508809 NPM2Q86SE8 214 aaKnown RBP11.52□□□□□ -0.57
COL4A3BP-206ENST00000508809 DZIP3Q86Y13 1208 aaKnown RBP11.52□□□□□ -0.57
COL4A3BP-206ENST00000508809 CACNA1SQ13698 1873 aa11.52□□□□□ -0.57
COL4A3BP-206ENST00000508809 LILRB3O75022 631 aa11.51□□□□□ -0.57
COL4A3BP-206ENST00000508809 PRAMEF22A3QJZ6 481 aa11.5□□□□□ -0.57
COL4A3BP-206ENST00000508809 SNRPA1P09661 255 aaKnown RBP11.5□□□□□ -0.57
COL4A3BP-206ENST00000508809 NPR1P16066 1061 aa11.5□□□□□ -0.57
COL4A3BP-206ENST00000508809 PRKAR2BP31323 418 aa11.5□□□□□ -0.57
COL4A3BP-206ENST00000508809 TRIM32Q13049 653 aa11.5□□□□□ -0.57
COL4A3BP-206ENST00000508809 QPCTQ16769 361 aa11.5□□□□□ -0.57
COL4A3BP-206ENST00000508809 EMID1Q96A84 441 aaPredicted RBP11.5□□□□□ -0.57
COL4A3BP-206ENST00000508809 PASKQ96RG2 1323 aa11.5□□□□□ -0.57
COL4A3BP-206ENST00000508809 IQCA1LA6NCM1 817 aa11.49□□□□□ -0.57
COL4A3BP-206ENST00000508809 NRG2O14511 850 aaPredicted RBP11.49□□□□□ -0.57
COL4A3BP-206ENST00000508809 NPHP1O15259 732 aa11.49□□□□□ -0.57
COL4A3BP-206ENST00000508809 NBPF10Q6P3W6 841 aaKnown RBP11.49□□□□□ -0.57
COL4A3BP-206ENST00000508809 TPTE2Q6XPS3 522 aa11.49□□□□□ -0.57
COL4A3BP-206ENST00000508809 LDHDQ86WU2 507 aa11.49□□□□□ -0.57
COL4A3BP-206ENST00000508809 NBPF5PQ86XG9 351 aaPredicted RBP11.49□□□□□ -0.57
COL4A3BP-206ENST00000508809 NBPF15Q8N660 670 aa11.49□□□□□ -0.57
COL4A3BP-206ENST00000508809 PCMTD1Q96MG8 357 aaPredicted RBP11.49□□□□□ -0.57
COL4A3BP-206ENST00000508809 TAF1DQ9H5J8 278 aaPredicted RBP11.49□□□□□ -0.57
COL4A3BP-206ENST00000508809 ZNF652Q9Y2D9 606 aa11.49□□□□□ -0.57
COL4A3BP-206ENST00000508809 CFAP99D6REC4 459 aa11.48□□□□□ -0.57
COL4A3BP-206ENST00000508809 HTATSF1O43719 755 aaKnown RBP11.48□□□□□ -0.57
COL4A3BP-206ENST00000508809 PIP4K2AP48426 406 aaPredicted RBP11.48□□□□□ -0.57
COL4A3BP-206ENST00000508809 FKBP4Q02790 459 aaKnown RBP eCLIP11.48□□□□□ -0.57
COL4A3BP-206ENST00000508809 CCDC93Q567U6 631 aa11.48□□□□□ -0.57
COL4A3BP-206ENST00000508809 IL27Q8NEV9 243 aa11.48□□□□□ -0.57
COL4A3BP-206ENST00000508809 GOPCQ9HD26 462 aa11.48□□□□□ -0.57
COL4A3BP-206ENST00000508809 CNTNAP1P78357 1384 aa11.47□□□□□ -0.57
COL4A3BP-206ENST00000508809 ALDH1B1P30837 517 aa11.47□□□□□ -0.57
COL4A3BP-206ENST00000508809 LYPD8Q6UX82 237 aa11.47□□□□□ -0.57
COL4A3BP-206ENST00000508809 MCM10Q7L590 875 aa11.47□□□□□ -0.57
COL4A3BP-206ENST00000508809 RTKN2Q8IZC4 609 aa11.47□□□□□ -0.57
COL4A3BP-206ENST00000508809 RTF1Q92541 710 aaKnown RBP11.47□□□□□ -0.57
COL4A3BP-206ENST00000508809 CFAP53Q96M91 514 aa11.47□□□□□ -0.57
COL4A3BP-206ENST00000508809 MKRN1Q9UHC7 482 aaKnown RBP11.47□□□□□ -0.57
COL4A3BP-206ENST00000508809 NIP7Q9Y221 180 aaKnown RBP eCLIP11.47□□□□□ -0.57
COL4A3BP-206ENST00000508809 NUDCQ9Y266 331 aa11.47□□□□□ -0.57
COL4A3BP-206ENST00000508809 FZD9O00144 591 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms