RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 NUDT16Q96DE0 195 aaKnown RBP7.57□□□□□ -1.2
HMGB1P44-201ENST00000508597 ZNF837Q96EG3 531 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P44-201ENST00000508597 HCN2Q9UL51 889 aa7.57□□□□□ -1.2
HMGB1P44-201ENST00000508597 BRD4O60885 1362 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P44-201ENST00000508597 EML1O00423 815 aa7.56□□□□□ -1.2
HMGB1P44-201ENST00000508597 ATG7O95352 703 aa7.56□□□□□ -1.2
HMGB1P44-201ENST00000508597 TEAD4Q15561 434 aa7.56□□□□□ -1.2
HMGB1P44-201ENST00000508597 TRIM22Q8IYM9 498 aa7.56□□□□□ -1.2
HMGB1P44-201ENST00000508597 FAM200AQ8TCP9 573 aa7.56□□□□□ -1.2
HMGB1P44-201ENST00000508597 SCG3Q8WXD2 468 aaKnown RBP7.56□□□□□ -1.2
HMGB1P44-201ENST00000508597 IRF7Q92985 503 aa7.56□□□□□ -1.2
HMGB1P44-201ENST00000508597 GTPBP3Q969Y2 492 aaKnown RBP7.56□□□□□ -1.2
HMGB1P44-201ENST00000508597 USTQ9Y2C2 406 aa7.56□□□□□ -1.2
HMGB1P44-201ENST00000508597 HCN4Q9Y3Q4 1203 aa7.56□□□□□ -1.2
HMGB1P44-201ENST00000508597 KIF1AQ12756 1690 aa7.56□□□□□ -1.2
HMGB1P44-201ENST00000508597 ATP7BP35670 1465 aa7.55□□□□□ -1.2
HMGB1P44-201ENST00000508597 A0A1B0GTH6 734 aa7.55□□□□□ -1.2
HMGB1P44-201ENST00000508597 LORP23490 312 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P44-201ENST00000508597 GTF2E1P29083 439 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P44-201ENST00000508597 PDE4CQ08493 712 aa7.55□□□□□ -1.2
HMGB1P44-201ENST00000508597 GAS6Q14393 721 aa7.55□□□□□ -1.2
HMGB1P44-201ENST00000508597 TMEM164Q5U3C3 297 aa7.55□□□□□ -1.2
HMGB1P44-201ENST00000508597 SV2AQ7L0J3 742 aa7.55□□□□□ -1.2
HMGB1P44-201ENST00000508597 FBXO41Q8TF61 875 aa7.55□□□□□ -1.2
HMGB1P44-201ENST00000508597 PRIMPOLQ96LW4 560 aa7.55□□□□□ -1.2
HMGB1P44-201ENST00000508597 RGPD8O14715 1765 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P44-201ENST00000508597 NPHP3Q7Z494 1330 aa7.54□□□□□ -1.2
HMGB1P44-201ENST00000508597 PRR36Q9H6K5 1346 aa7.54□□□□□ -1.2
HMGB1P44-201ENST00000508597 TOPAZ1Q8N9V7 1692 aa7.54□□□□□ -1.2
HMGB1P44-201ENST00000508597 USP32Q8NFA0 1604 aa7.54□□□□□ -1.2
HMGB1P44-201ENST00000508597 ELOAQ14241 798 aaKnown RBP7.54□□□□□ -1.2
HMGB1P44-201ENST00000508597 POTEAQ6S8J7 498 aa7.54□□□□□ -1.2
HMGB1P44-201ENST00000508597 BRINP3Q76B58 766 aa7.54□□□□□ -1.2
HMGB1P44-201ENST00000508597 ZIC5Q96T25 663 aa7.54□□□□□ -1.2
HMGB1P44-201ENST00000508597 COL25A1Q9BXS0 654 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P44-201ENST00000508597 TERF2IPQ9NYB0 399 aa7.54□□□□□ -1.2
HMGB1P44-201ENST00000508597 POLR3AO14802 1390 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P44-201ENST00000508597 DISP3Q9P2K9 1392 aa7.54□□□□□ -1.2
HMGB1P44-201ENST00000508597 PPIP5K1Q6PFW1 1433 aa7.53□□□□□ -1.2
HMGB1P44-201ENST00000508597 SERTM1A2A2V5 107 aa7.53□□□□□ -1.2
HMGB1P44-201ENST00000508597 PPP1R12BO60237 982 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P44-201ENST00000508597 WEE1P30291 646 aa7.53□□□□□ -1.2
HMGB1P44-201ENST00000508597 HDGFL2Q7Z4V5 671 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P44-201ENST00000508597 NGDNQ8NEJ9 315 aaKnown RBP7.53□□□□□ -1.2
HMGB1P44-201ENST00000508597 ORAI2Q96SN7 254 aa7.53□□□□□ -1.2
HMGB1P44-201ENST00000508597 C2orf49Q9BVC5 232 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P44-201ENST00000508597 ZNF232Q9UNY5 417 aa7.53□□□□□ -1.2
HMGB1P44-201ENST00000508597 RBM19Q9Y4C8 960 aaKnown RBP7.53□□□□□ -1.2
HMGB1P44-201ENST00000508597 ROBO1Q9Y6N7 1651 aa7.53□□□□□ -1.2
HMGB1P44-201ENST00000508597 AHDC1Q5TGY3 1603 aaPredicted RBP7.52□□□□□ -1.2
HMGB1P44-201ENST00000508597 ANKRD36BQ8N2N9 1353 aa7.52□□□□□ -1.21
HMGB1P44-201ENST00000508597 CCDC7Q96M83 1385 aa7.52□□□□□ -1.21
HMGB1P44-201ENST00000508597 SCNN1AP37088 669 aa7.52□□□□□ -1.21
HMGB1P44-201ENST00000508597 CAPN12Q6ZSI9 719 aa7.52□□□□□ -1.21
HMGB1P44-201ENST00000508597 TMC1Q8TDI8 760 aa7.52□□□□□ -1.21
HMGB1P44-201ENST00000508597 CNTNAP3BQ96NU0 1288 aa7.52□□□□□ -1.21
HMGB1P44-201ENST00000508597 CNTNAP3Q9BZ76 1288 aa7.52□□□□□ -1.21
HMGB1P44-201ENST00000508597 NUCKS1Q9H1E3 243 aaKnown RBP7.52□□□□□ -1.21
HMGB1P44-201ENST00000508597 NHSL1Q5SYE7 1610 aa7.52□□□□□ -1.21
HMGB1P44-201ENST00000508597 CPSF1Q10570 1443 aaKnown RBP7.52□□□□□ -1.21
HMGB1P44-201ENST00000508597 ACEP12821 1306 aa7.52□□□□□ -1.21
HMGB1P44-201ENST00000508597 KIF7Q2M1P5 1343 aa7.52□□□□□ -1.21
HMGB1P44-201ENST00000508597 SBNO1A3KN83 1393 aa7.51□□□□□ -1.21
HMGB1P44-201ENST00000508597 A0A1W2PNR3 127 aa7.51□□□□□ -1.21
HMGB1P44-201ENST00000508597 WIPF1O43516 503 aa7.51□□□□□ -1.21
HMGB1P44-201ENST00000508597 FOXO3O43524 673 aa7.51□□□□□ -1.21
HMGB1P44-201ENST00000508597 PRMT3O60678 531 aa7.51□□□□□ -1.21
HMGB1P44-201ENST00000508597 CSB-PGBD3P0DP91 1061 aa7.51□□□□□ -1.21
HMGB1P44-201ENST00000508597 PSMA6P60900 246 aaKnown RBP7.51□□□□□ -1.21
HMGB1P44-201ENST00000508597 PIP4K2BP78356 416 aa7.51□□□□□ -1.21
HMGB1P44-201ENST00000508597 OCLNQ16625 522 aa7.51□□□□□ -1.21
HMGB1P44-201ENST00000508597 LRRC59Q96AG4 307 aaKnown RBP7.51□□□□□ -1.21
HMGB1P44-201ENST00000508597 CRISPLD1Q9H336 500 aa7.51□□□□□ -1.21
HMGB1P44-201ENST00000508597 AKAP12Q02952 1782 aa7.51□□□□□ -1.21
HMGB1P44-201ENST00000508597 BNIP3LO60238 219 aa7.5□□□□□ -1.21
HMGB1P44-201ENST00000508597 KRT28Q7Z3Y7 464 aa7.5□□□□□ -1.21
HMGB1P44-201ENST00000508597 PMFBP1Q8TBY8 1022 aa7.5□□□□□ -1.21
HMGB1P44-201ENST00000508597 ZCCHC2Q9C0B9 1178 aaKnown RBP7.5□□□□□ -1.21
HMGB1P44-201ENST00000508597 PHACTR1Q9C0D0 580 aa7.5□□□□□ -1.21
HMGB1P44-201ENST00000508597 SLC12A5Q9H2X9 1139 aa7.5□□□□□ -1.21
HMGB1P44-201ENST00000508597 WASHC2AQ641Q2 1341 aa7.5□□□□□ -1.21
HMGB1P44-201ENST00000508597 TTC21AQ8NDW8 1320 aa7.5□□□□□ -1.21
HMGB1P44-201ENST00000508597 ARHGEF10O15013 1369 aa7.49□□□□□ -1.21
HMGB1P44-201ENST00000508597 KTN1Q86UP2 1357 aaKnown RBP7.49□□□□□ -1.21
HMGB1P44-201ENST00000508597 MYOM1P52179 1685 aa7.49□□□□□ -1.21
HMGB1P44-201ENST00000508597 TMEM88BA6NKF7 163 aa7.49□□□□□ -1.21
HMGB1P44-201ENST00000508597 FKBP5Q13451 457 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P44-201ENST00000508597 ARSJQ5FYB0 599 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P44-201ENST00000508597 ZNF280CQ8ND82 737 aa7.49□□□□□ -1.21
HMGB1P44-201ENST00000508597 ABHD17AQ96GS6 310 aa7.49□□□□□ -1.21
HMGB1P44-201ENST00000508597 NGLY1Q96IV0 654 aa7.49□□□□□ -1.21
HMGB1P44-201ENST00000508597 NDFIP2Q9NV92 336 aa7.49□□□□□ -1.21
HMGB1P44-201ENST00000508597 ZDHHC3Q9NYG2 299 aa7.49□□□□□ -1.21
HMGB1P44-201ENST00000508597 USP6P35125 1406 aa7.49□□□□□ -1.21
HMGB1P44-201ENST00000508597 EDC4Q6P2E9 1401 aaKnown RBP7.49□□□□□ -1.21
HMGB1P44-201ENST00000508597 PHLPP1O60346 1717 aa7.49□□□□□ -1.21
HMGB1P44-201ENST00000508597 MON2Q7Z3U7 1717 aa7.49□□□□□ -1.21
HMGB1P44-201ENST00000508597 PXDNQ92626 1479 aa7.49□□□□□ -1.21
HMGB1P44-201ENST00000508597 CD163L1Q9NR16 1453 aa7.49□□□□□ -1.21
HMGB1P44-201ENST00000508597 H7C1W4 665 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms