RNA–Protein interactions for RNA: ENST00000508317.5

DDR1-263, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-263ENST00000508317 RGMBQ6NW40 437 aa20.82■□□□□ 0.92
DDR1-263ENST00000508317 MCOLN1Q9GZU1 580 aa20.82■□□□□ 0.92
DDR1-263ENST00000508317 COA1Q9GZY4 146 aa20.82■□□□□ 0.92
DDR1-263ENST00000508317 CHMP3Q9Y3E7 222 aa20.82■□□□□ 0.92
DDR1-263ENST00000508317 RTL9Q8NET4 1388 aa20.82■□□□□ 0.92
DDR1-263ENST00000508317 FANCIQ9NVI1 1328 aa20.81■□□□□ 0.92
DDR1-263ENST00000508317 DUOX1Q9NRD9 1551 aa20.81■□□□□ 0.92
DDR1-263ENST00000508317 ANKRD18BA2A2Z9 1011 aa20.81■□□□□ 0.92
DDR1-263ENST00000508317 ITGA6P23229 1130 aa20.81■□□□□ 0.92
DDR1-263ENST00000508317 NF2P35240 595 aa20.81■□□□□ 0.92
DDR1-263ENST00000508317 SCARF1Q14162 830 aa20.81■□□□□ 0.92
DDR1-263ENST00000508317 TAF7LQ5H9L4 462 aa20.81■□□□□ 0.92
DDR1-263ENST00000508317 MYOZ2Q9NPC6 264 aa20.81■□□□□ 0.92
DDR1-263ENST00000508317 HDAC9Q9UKV0 1011 aa20.81■□□□□ 0.92
DDR1-263ENST00000508317 MED23Q9ULK4 1368 aa20.81■□□□□ 0.92
DDR1-263ENST00000508317 DDX60Q8IY21 1712 aaKnown RBP20.81■□□□□ 0.92
DDR1-263ENST00000508317 ADM5C9JUS6 153 aa20.8■□□□□ 0.92
DDR1-263ENST00000508317 LRRC37AA6NMS7 1700 aa20.8■□□□□ 0.92
DDR1-263ENST00000508317 ZNF280AP59817 542 aaPredicted RBP20.79■□□□□ 0.92
DDR1-263ENST00000508317 FKBP1BP68106 108 aa20.79■□□□□ 0.92
DDR1-263ENST00000508317 IFIT5Q13325 482 aaKnown RBP20.79■□□□□ 0.92
DDR1-263ENST00000508317 ANGEL2Q5VTE6 544 aaKnown RBP20.79■□□□□ 0.92
DDR1-263ENST00000508317 G2E3Q7L622 706 aa20.79■□□□□ 0.92
DDR1-263ENST00000508317 PLA2G12BQ9BX93 195 aa20.79■□□□□ 0.92
DDR1-263ENST00000508317 EXOSC9Q06265 439 aaKnown RBP20.78■□□□□ 0.92
DDR1-263ENST00000508317 STRIP1Q5VSL9 837 aa20.78■□□□□ 0.92
DDR1-263ENST00000508317 REM2Q8IYK8 340 aaPredicted RBP20.78■□□□□ 0.92
DDR1-263ENST00000508317 FAM9BQ8IZU0 186 aa20.78■□□□□ 0.92
DDR1-263ENST00000508317 ZNF804BA4D1E1 1349 aa20.78■□□□□ 0.92
DDR1-263ENST00000508317 TTLL12Q14166 644 aaPredicted RBP20.77■□□□□ 0.92
DDR1-263ENST00000508317 CDCA5Q96FF9 252 aa20.77■□□□□ 0.92
DDR1-263ENST00000508317 C9orf78Q9NZ63 289 aaPredicted RBP20.77■□□□□ 0.92
DDR1-263ENST00000508317 PITPNM2Q9BZ72 1349 aa20.77■□□□□ 0.91
DDR1-263ENST00000508317 VAMP4O75379 141 aa20.76■□□□□ 0.91
DDR1-263ENST00000508317 EGFRP00533 1210 aa20.76■□□□□ 0.91
DDR1-263ENST00000508317 CCDC57Q2TAC2 916 aa20.76■□□□□ 0.91
DDR1-263ENST00000508317 TTLL5Q6EMB2 1281 aa20.75■□□□□ 0.91
DDR1-263ENST00000508317 ZNF804AQ7Z570 1209 aa20.74■□□□□ 0.91
DDR1-263ENST00000508317 ZNF609O15014 1411 aa20.73■□□□□ 0.91
DDR1-263ENST00000508317 CSF1RP07333 972 aa20.73■□□□□ 0.91
DDR1-263ENST00000508317 TRPM7Q96QT4 1865 aa20.73■□□□□ 0.91
DDR1-263ENST00000508317 KIF23Q02241 960 aaPredicted RBP20.72■□□□□ 0.91
DDR1-263ENST00000508317 CHRNDQ07001 517 aa20.72■□□□□ 0.91
DDR1-263ENST00000508317 SLC4A10Q6U841 1118 aa20.72■□□□□ 0.91
DDR1-263ENST00000508317 GMLQ99445 158 aa20.72■□□□□ 0.91
DDR1-263ENST00000508317 CNNM1Q9NRU3 951 aa20.72■□□□□ 0.91
DDR1-263ENST00000508317 SAGE1Q9NXZ1 904 aa20.72■□□□□ 0.91
DDR1-263ENST00000508317 TAF1P21675 1872 aa20.72■□□□□ 0.91
DDR1-263ENST00000508317 MYO1BO43795 1136 aa20.71■□□□□ 0.91
DDR1-263ENST00000508317 DACT2Q5SW24 774 aa20.71■□□□□ 0.91
DDR1-263ENST00000508317 APOBEC3FQ8IUX4 373 aaKnown RBP20.71■□□□□ 0.91
DDR1-263ENST00000508317 GTF2IP78347 998 aa20.7■□□□□ 0.9
DDR1-263ENST00000508317 DLK2Q6UY11 383 aa20.7■□□□□ 0.9
DDR1-263ENST00000508317 LDHAL6AQ6ZMR3 332 aa20.7■□□□□ 0.9
DDR1-263ENST00000508317 ARMC9Q7Z3E5 817 aa20.7■□□□□ 0.9
DDR1-263ENST00000508317 ZIC5Q96T25 663 aa20.7■□□□□ 0.9
DDR1-263ENST00000508317 SRCIN1Q9C0H9 1055 aa20.7■□□□□ 0.9
DDR1-263ENST00000508317 F6X3S4 739 aa20.69■□□□□ 0.9
DDR1-263ENST00000508317 GRM8O00222 908 aa20.69■□□□□ 0.9
DDR1-263ENST00000508317 ALDH1L1O75891 902 aa20.69■□□□□ 0.9
DDR1-263ENST00000508317 SLC10A3P09131 477 aa20.69■□□□□ 0.9
DDR1-263ENST00000508317 DGKZQ13574 1117 aa20.69■□□□□ 0.9
DDR1-263ENST00000508317 DLGAP5Q15398 846 aa20.69■□□□□ 0.9
DDR1-263ENST00000508317 KIAA0825Q8IV33 1275 aa20.69■□□□□ 0.9
DDR1-263ENST00000508317 PLIN1O60240 522 aa20.68■□□□□ 0.9
DDR1-263ENST00000508317 BEND3Q5T5X7 828 aa20.68■□□□□ 0.9
DDR1-263ENST00000508317 LMBR1LQ6UX01 489 aa20.68■□□□□ 0.9
DDR1-263ENST00000508317 ASTN2O75129 1339 aaPredicted RBP20.68■□□□□ 0.9
DDR1-263ENST00000508317 TRPA1O75762 1119 aa20.67■□□□□ 0.9
DDR1-263ENST00000508317 NBPF9Q3BBW0 867 aa20.67■□□□□ 0.9
DDR1-263ENST00000508317 CASP8AP2Q9UKL3 1982 aa20.66■□□□□ 0.9
DDR1-263ENST00000508317 FAM155AB1AL88 458 aaPredicted RBP20.66■□□□□ 0.9
DDR1-263ENST00000508317 WNT10BO00744 389 aa20.66■□□□□ 0.9
DDR1-263ENST00000508317 CASP7P55210 303 aa20.66■□□□□ 0.9
DDR1-263ENST00000508317 CD209Q9NNX6 404 aa20.66■□□□□ 0.9
DDR1-263ENST00000508317 TAF5LO75529 589 aa20.65■□□□□ 0.9
DDR1-263ENST00000508317 SASH1O94885 1247 aa20.65■□□□□ 0.9
DDR1-263ENST00000508317 RBM5P52756 815 aaKnown RBP eCLIP20.65■□□□□ 0.9
DDR1-263ENST00000508317 HELBQ8NG08 1087 aaPredicted RBP20.65■□□□□ 0.9
DDR1-263ENST00000508317 MXD3Q9BW11 206 aa20.65■□□□□ 0.9
DDR1-263ENST00000508317 COL4A1P02462 1669 aa20.64■□□□□ 0.9
DDR1-263ENST00000508317 WTIPA6NIX2 430 aaPredicted RBP20.64■□□□□ 0.89
DDR1-263ENST00000508317 SOX10P56693 466 aa20.64■□□□□ 0.89
DDR1-263ENST00000508317 TXNRD3Q86VQ6 643 aa20.64■□□□□ 0.89
DDR1-263ENST00000508317 VPS37DQ86XT2 251 aa20.64■□□□□ 0.89
DDR1-263ENST00000508317 RNF186Q9NXI6 227 aa20.64■□□□□ 0.89
DDR1-263ENST00000508317 PDE4DIPQ5VU43 2346 aa20.63■□□□□ 0.89
DDR1-263ENST00000508317 UBE2Q2LH0YL09 131 aa20.63■□□□□ 0.89
DDR1-263ENST00000508317 FOXO4P98177 505 aa20.63■□□□□ 0.89
DDR1-263ENST00000508317 SREBF2Q12772 1141 aa20.63■□□□□ 0.89
DDR1-263ENST00000508317 C15orf52Q6ZUT6 534 aaKnown RBP20.63■□□□□ 0.89
DDR1-263ENST00000508317 RASAL3Q86YV0 1011 aa20.63■□□□□ 0.89
DDR1-263ENST00000508317 PPP1R12BO60237 982 aaPredicted RBP20.62■□□□□ 0.89
DDR1-263ENST00000508317 FRAT2O75474 233 aaPredicted RBP20.62■□□□□ 0.89
DDR1-263ENST00000508317 SUPT20HL1Q3ZLR7 823 aa20.62■□□□□ 0.89
DDR1-263ENST00000508317 CSRNP1Q96S65 589 aa20.62■□□□□ 0.89
DDR1-263ENST00000508317 PPP2R3BQ9Y5P8 575 aa20.62■□□□□ 0.89
DDR1-263ENST00000508317 E9PSI1 815 aa20.61■□□□□ 0.89
DDR1-263ENST00000508317 F8W031 263 aaPredicted RBP20.61■□□□□ 0.89
DDR1-263ENST00000508317 PRAMEF18Q5VWM3 479 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms