RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 HCLS1P14317 486 aaPredicted RBP17.18■□□□□ 0.34
DDX41-208ENST00000507955 ATP6V1DQ9Y5K8 247 aa17.18■□□□□ 0.34
DDX41-208ENST00000507955 DISP2A7MBM2 1401 aa17.18■□□□□ 0.34
DDX41-208ENST00000507955 MCAMP43121 646 aa17.17■□□□□ 0.34
DDX41-208ENST00000507955 CTSWP56202 376 aa17.17■□□□□ 0.34
DDX41-208ENST00000507955 ATP2B3Q16720 1220 aa17.17■□□□□ 0.34
DDX41-208ENST00000507955 RAB11FIP4Q86YS3 637 aa17.17■□□□□ 0.34
DDX41-208ENST00000507955 SYAP1Q96A49 352 aaPredicted RBP17.17■□□□□ 0.34
DDX41-208ENST00000507955 ALDH8A1Q9H2A2 487 aaPredicted RBP17.17■□□□□ 0.34
DDX41-208ENST00000507955 KCNQ4P56696 695 aa17.16■□□□□ 0.34
DDX41-208ENST00000507955 HSP90AA2PQ14568 343 aaPredicted RBP17.16■□□□□ 0.34
DDX41-208ENST00000507955 PLA2G12BQ9BX93 195 aa17.16■□□□□ 0.34
DDX41-208ENST00000507955 DENND2AQ9ULE3 1009 aa17.16■□□□□ 0.34
DDX41-208ENST00000507955 AKAP2Q9Y2D5 859 aa17.16■□□□□ 0.34
DDX41-208ENST00000507955 RFX7Q2KHR2 1363 aa17.16■□□□□ 0.34
DDX41-208ENST00000507955 ZNF500O60304 480 aaPredicted RBP17.16■□□□□ 0.34
DDX41-208ENST00000507955 CEBPZQ03701 1054 aaKnown RBP17.16■□□□□ 0.34
DDX41-208ENST00000507955 SMIM5Q71RC9 77 aa17.16■□□□□ 0.34
DDX41-208ENST00000507955 DHX32Q7L7V1 743 aaKnown RBP17.16■□□□□ 0.34
DDX41-208ENST00000507955 DSCC1Q9BVC3 393 aa17.16■□□□□ 0.34
DDX41-208ENST00000507955 RIC1Q4ADV7 1423 aa17.15■□□□□ 0.34
DDX41-208ENST00000507955 TPM2P07951 284 aa17.15■□□□□ 0.34
DDX41-208ENST00000507955 CAMK4Q16566 473 aa17.15■□□□□ 0.34
DDX41-208ENST00000507955 ZKSCAN5Q9Y2L8 839 aa17.15■□□□□ 0.34
DDX41-208ENST00000507955 ANKRD18BA2A2Z9 1011 aa17.15■□□□□ 0.34
DDX41-208ENST00000507955 CTDNEP1O95476 244 aa17.15■□□□□ 0.34
DDX41-208ENST00000507955 CCDC183Q5T5S1 534 aa17.15■□□□□ 0.34
DDX41-208ENST00000507955 NKX2-3Q8TAU0 364 aa17.15■□□□□ 0.34
DDX41-208ENST00000507955 RRP9O43818 475 aaKnown RBP17.14■□□□□ 0.33
DDX41-208ENST00000507955 FGAP02671 866 aa17.14■□□□□ 0.33
DDX41-208ENST00000507955 LIG1P18858 919 aa17.14■□□□□ 0.33
DDX41-208ENST00000507955 ATP6V1AP38606 617 aa17.14■□□□□ 0.33
DDX41-208ENST00000507955 EXOSC10Q01780 885 aaKnown RBP17.14■□□□□ 0.33
DDX41-208ENST00000507955 SEC31BQ9NQW1 1179 aa17.14■□□□□ 0.33
DDX41-208ENST00000507955 ROBO1Q9Y6N7 1651 aa17.14■□□□□ 0.33
DDX41-208ENST00000507955 PHKA1P46020 1223 aa17.14■□□□□ 0.33
DDX41-208ENST00000507955 GUCY1B3Q02153 619 aa17.14■□□□□ 0.33
DDX41-208ENST00000507955 SUSD4Q5VX71 490 aa17.14■□□□□ 0.33
DDX41-208ENST00000507955 FTOQ9C0B1 505 aaKnown RBP eCLIP17.14■□□□□ 0.33
DDX41-208ENST00000507955 TAOK2Q9UL54 1235 aa17.14■□□□□ 0.33
DDX41-208ENST00000507955 LAMA4Q16363 1823 aa17.13■□□□□ 0.33
DDX41-208ENST00000507955 KCNQ2O43526 872 aa17.13■□□□□ 0.33
DDX41-208ENST00000507955 DDB1Q16531 1140 aa17.13■□□□□ 0.33
DDX41-208ENST00000507955 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.13■□□□□ 0.33
DDX41-208ENST00000507955 MARCH10Q8NA82 808 aaPredicted RBP17.13■□□□□ 0.33
DDX41-208ENST00000507955 PDCP20941 246 aa17.13■□□□□ 0.33
DDX41-208ENST00000507955 KRT85P78386 507 aa17.13■□□□□ 0.33
DDX41-208ENST00000507955 INTS5Q6P9B9 1019 aaKnown RBP17.13■□□□□ 0.33
DDX41-208ENST00000507955 SLIT2O94813 1529 aa17.12■□□□□ 0.33
DDX41-208ENST00000507955 IDH1O75874 414 aaKnown RBP17.12■□□□□ 0.33
DDX41-208ENST00000507955 ITPK1Q13572 414 aa17.12■□□□□ 0.33
DDX41-208ENST00000507955 VGLL2Q8N8G2 317 aa17.12■□□□□ 0.33
DDX41-208ENST00000507955 PIH1D3Q9NQM4 214 aaKnown RBP17.12■□□□□ 0.33
DDX41-208ENST00000507955 R3HCC1Q9Y3T6 440 aaKnown RBP17.12■□□□□ 0.33
DDX41-208ENST00000507955 H3BQV1 296 aa17.12■□□□□ 0.33
DDX41-208ENST00000507955 CRKLP46109 303 aaKnown RBP17.12■□□□□ 0.33
DDX41-208ENST00000507955 PIP4K2BP78356 416 aa17.12■□□□□ 0.33
DDX41-208ENST00000507955 IFFO2Q5TF58 517 aa17.12■□□□□ 0.33
DDX41-208ENST00000507955 NSUN7Q8NE18 718 aaKnown RBP17.12■□□□□ 0.33
DDX41-208ENST00000507955 CDHR2Q9BYE9 1310 aa17.12■□□□□ 0.33
DDX41-208ENST00000507955 COL16A1Q07092 1604 aaPredicted RBP17.12■□□□□ 0.33
DDX41-208ENST00000507955 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.11■□□□□ 0.33
DDX41-208ENST00000507955 GPAA1O43292 621 aa17.11■□□□□ 0.33
DDX41-208ENST00000507955 SLC9C2Q5TAH2 1124 aa17.11■□□□□ 0.33
DDX41-208ENST00000507955 FAM184AQ8NB25 1140 aa17.11■□□□□ 0.33
DDX41-208ENST00000507955 PDE8AO60658 829 aa17.11■□□□□ 0.33
DDX41-208ENST00000507955 PDE8BO95263 885 aa17.11■□□□□ 0.33
DDX41-208ENST00000507955 IL6STP40189 918 aaPredicted RBP17.11■□□□□ 0.33
DDX41-208ENST00000507955 ZNF34Q8IZ26 560 aa17.11■□□□□ 0.33
DDX41-208ENST00000507955 SPATA32Q96LK8 384 aa17.11■□□□□ 0.33
DDX41-208ENST00000507955 USP25Q9UHP3 1055 aa17.11■□□□□ 0.33
DDX41-208ENST00000507955 LRP6O75581 1613 aa17.1■□□□□ 0.33
DDX41-208ENST00000507955 PTPDC1A2A3K4 754 aa17.1■□□□□ 0.33
DDX41-208ENST00000507955 PFKFB2O60825 505 aa17.1■□□□□ 0.33
DDX41-208ENST00000507955 PHF14O94880 888 aa17.1■□□□□ 0.33
DDX41-208ENST00000507955 PDIA3P30101 505 aaKnown RBP17.1■□□□□ 0.33
DDX41-208ENST00000507955 CCDC102BQ68D86 513 aa17.1■□□□□ 0.33
DDX41-208ENST00000507955 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.1■□□□□ 0.33
DDX41-208ENST00000507955 INCENPQ9NQS7 918 aa17.1■□□□□ 0.33
DDX41-208ENST00000507955 NUP98P52948 1817 aa17.1■□□□□ 0.33
DDX41-208ENST00000507955 WTIPA6NIX2 430 aaPredicted RBP17.1■□□□□ 0.33
DDX41-208ENST00000507955 PLCB2Q00722 1185 aa17.1■□□□□ 0.33
DDX41-208ENST00000507955 CCDC39Q9UFE4 941 aa17.1■□□□□ 0.33
DDX41-208ENST00000507955 SPATA31A1Q5TZJ5 1347 aa17.1■□□□□ 0.33
DDX41-208ENST00000507955 COL14A1Q05707 1796 aaKnown RBP17.1■□□□□ 0.33
DDX41-208ENST00000507955 EIF5P55010 431 aaKnown RBP17.09■□□□□ 0.33
DDX41-208ENST00000507955 OTUD7BQ6GQQ9 843 aa17.09■□□□□ 0.33
DDX41-208ENST00000507955 CKAP2LQ8IYA6 745 aa17.09■□□□□ 0.33
DDX41-208ENST00000507955 LEO1Q8WVC0 666 aaPredicted RBP17.09■□□□□ 0.33
DDX41-208ENST00000507955 GJB4Q9NTQ9 266 aa17.09■□□□□ 0.33
DDX41-208ENST00000507955 WWC3Q9ULE0 1092 aa17.09■□□□□ 0.33
DDX41-208ENST00000507955 MYO5AQ9Y4I1 1855 aaKnown RBP17.09■□□□□ 0.33
DDX41-208ENST00000507955 HMGB1P09429 215 aaKnown RBP17.09■□□□□ 0.33
DDX41-208ENST00000507955 RESTQ13127 1097 aa17.09■□□□□ 0.33
DDX41-208ENST00000507955 APPBP2Q92624 585 aa17.09■□□□□ 0.33
DDX41-208ENST00000507955 PGBD1Q96JS3 809 aa17.09■□□□□ 0.33
DDX41-208ENST00000507955 FBXO3Q9UK99 471 aa17.09■□□□□ 0.33
DDX41-208ENST00000507955 LOC102724428A0A0B4J2F2 783 aa17.08■□□□□ 0.33
DDX41-208ENST00000507955 SIK1P57059 783 aa17.08■□□□□ 0.33
DDX41-208ENST00000507955 SMARCC2Q8TAQ2 1214 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms