RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 A6NHS1 94 aa9.65□□□□□ -0.86
LINC01088-203ENST00000507476 DNM1Q05193 864 aaKnown RBP9.65□□□□□ -0.86
LINC01088-203ENST00000507476 NOM1Q5C9Z4 860 aaKnown RBP9.65□□□□□ -0.86
LINC01088-203ENST00000507476 NFKBIEO00221 500 aa9.64□□□□□ -0.87
LINC01088-203ENST00000507476 PDGFAP04085 211 aa9.64□□□□□ -0.87
LINC01088-203ENST00000507476 PTPRAP18433 802 aa9.64□□□□□ -0.87
LINC01088-203ENST00000507476 MPSTP25325 297 aa9.64□□□□□ -0.87
LINC01088-203ENST00000507476 EIF1AXP47813 144 aaKnown RBP9.64□□□□□ -0.87
LINC01088-203ENST00000507476 ACAD11Q709F0 780 aa9.64□□□□□ -0.87
LINC01088-203ENST00000507476 GTF3C2Q8WUA4 911 aaPredicted RBP9.64□□□□□ -0.87
LINC01088-203ENST00000507476 DDX3YO15523 660 aaKnown RBP9.63□□□□□ -0.87
LINC01088-203ENST00000507476 ADAM11O75078 769 aa9.63□□□□□ -0.87
LINC01088-203ENST00000507476 RPLP1P05386 114 aaKnown RBP9.63□□□□□ -0.87
LINC01088-203ENST00000507476 SSFA2P28290 1259 aa9.63□□□□□ -0.87
LINC01088-203ENST00000507476 KIAA1211Q6ZU35 1233 aa9.63□□□□□ -0.87
LINC01088-203ENST00000507476 CCDC82Q8N4S0 544 aa9.63□□□□□ -0.87
LINC01088-203ENST00000507476 KLHL23Q8NBE8 558 aa9.63□□□□□ -0.87
LINC01088-203ENST00000507476 FOXD4L4Q8WXT5 416 aaPredicted RBP9.63□□□□□ -0.87
LINC01088-203ENST00000507476 CHRDQ9H2X0 955 aa9.63□□□□□ -0.87
LINC01088-203ENST00000507476 CES1P23141 567 aa9.62□□□□□ -0.87
LINC01088-203ENST00000507476 MTMR3Q13615 1198 aa9.62□□□□□ -0.87
LINC01088-203ENST00000507476 ARMC10Q8N2F6 343 aa9.62□□□□□ -0.87
LINC01088-203ENST00000507476 UBASH3BQ8TF42 649 aa9.62□□□□□ -0.87
LINC01088-203ENST00000507476 KLHDC7BQ96G42 594 aa9.62□□□□□ -0.87
LINC01088-203ENST00000507476 HHIPQ96QV1 700 aa9.62□□□□□ -0.87
LINC01088-203ENST00000507476 DZANK1Q9NVP4 752 aa9.62□□□□□ -0.87
LINC01088-203ENST00000507476 RAXQ9Y2V3 346 aa9.62□□□□□ -0.87
LINC01088-203ENST00000507476 TRPA1O75762 1119 aa9.61□□□□□ -0.87
LINC01088-203ENST00000507476 MZF1P28698 734 aaPredicted RBP9.61□□□□□ -0.87
LINC01088-203ENST00000507476 C8orf34Q49A92 452 aa9.61□□□□□ -0.87
LINC01088-203ENST00000507476 FAM117BQ6P1L5 589 aa9.61□□□□□ -0.87
LINC01088-203ENST00000507476 SLC51AQ86UW1 340 aa9.61□□□□□ -0.87
LINC01088-203ENST00000507476 H3BRJ5 948 aa9.6□□□□□ -0.87
LINC01088-203ENST00000507476 DUOXA2Q1HG44 320 aa9.6□□□□□ -0.87
LINC01088-203ENST00000507476 KRTAP9-2Q9BYQ4 174 aa9.6□□□□□ -0.87
LINC01088-203ENST00000507476 SEC31BQ9NQW1 1179 aa9.6□□□□□ -0.87
LINC01088-203ENST00000507476 PCSK2P16519 638 aa9.59□□□□□ -0.87
LINC01088-203ENST00000507476 FAM46AQ96IP4 442 aaKnown RBP9.59□□□□□ -0.87
LINC01088-203ENST00000507476 CEP41Q9BYV8 373 aa9.59□□□□□ -0.87
LINC01088-203ENST00000507476 C1orf115Q9H7X2 142 aa9.59□□□□□ -0.87
LINC01088-203ENST00000507476 POLIQ9UNA4 740 aa9.59□□□□□ -0.87
LINC01088-203ENST00000507476 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.58□□□□□ -0.88
LINC01088-203ENST00000507476 PDE2AO00408 941 aaPredicted RBP9.58□□□□□ -0.88
LINC01088-203ENST00000507476 NPR3P17342 541 aa9.58□□□□□ -0.88
LINC01088-203ENST00000507476 STOML1Q9UBI4 398 aa9.58□□□□□ -0.88
LINC01088-203ENST00000507476 GTF3C3Q9Y5Q9 886 aa9.58□□□□□ -0.88
LINC01088-203ENST00000507476 FAM177BA6PVY3 158 aa9.57□□□□□ -0.88
LINC01088-203ENST00000507476 DHX15O43143 795 aaKnown RBP9.57□□□□□ -0.88
LINC01088-203ENST00000507476 PPP1R15AO75807 674 aaPredicted RBP9.57□□□□□ -0.88
LINC01088-203ENST00000507476 PIP4K2BP78356 416 aa9.57□□□□□ -0.88
LINC01088-203ENST00000507476 PHLDB3Q6NSJ2 640 aa9.57□□□□□ -0.88
LINC01088-203ENST00000507476 WNT8BQ93098 351 aa9.57□□□□□ -0.88
LINC01088-203ENST00000507476 SOX13Q9UN79 622 aa9.57□□□□□ -0.88
LINC01088-203ENST00000507476 CARNS1A5YM72 827 aa9.56□□□□□ -0.88
LINC01088-203ENST00000507476 EREGO14944 169 aa9.56□□□□□ -0.88
LINC01088-203ENST00000507476 IGLV1-40P01703 118 aa9.56□□□□□ -0.88
LINC01088-203ENST00000507476 SSTR4P31391 388 aa9.56□□□□□ -0.88
LINC01088-203ENST00000507476 CABP4P57796 275 aa9.56□□□□□ -0.88
LINC01088-203ENST00000507476 UVSSAQ2YD98 709 aa9.56□□□□□ -0.88
LINC01088-203ENST00000507476 HGSNATQ68CP4 663 aa9.56□□□□□ -0.88
LINC01088-203ENST00000507476 ALKBH2Q6NS38 261 aa9.56□□□□□ -0.88
LINC01088-203ENST00000507476 UTP4Q969X6 686 aaKnown RBP9.56□□□□□ -0.88
LINC01088-203ENST00000507476 OSGEPQ9NPF4 335 aa9.56□□□□□ -0.88
LINC01088-203ENST00000507476 TNFRSF21O75509 655 aa9.55□□□□□ -0.88
LINC01088-203ENST00000507476 CD97P48960 835 aa9.55□□□□□ -0.88
LINC01088-203ENST00000507476 TMEM102Q8N9M5 508 aaPredicted RBP9.55□□□□□ -0.88
LINC01088-203ENST00000507476 TTC16Q8NEE8 873 aa9.55□□□□□ -0.88
LINC01088-203ENST00000507476 PMEPA1Q969W9 287 aa9.55□□□□□ -0.88
LINC01088-203ENST00000507476 ZKSCAN3Q9BRR0 538 aa9.55□□□□□ -0.88
LINC01088-203ENST00000507476 KRTAP9-6A0A140TA67 174 aa9.54□□□□□ -0.88
LINC01088-203ENST00000507476 GSC2O15499 205 aa9.54□□□□□ -0.88
LINC01088-203ENST00000507476 NLRP12P59046 1061 aa9.54□□□□□ -0.88
LINC01088-203ENST00000507476 SLC7A3Q8WY07 619 aa9.54□□□□□ -0.88
LINC01088-203ENST00000507476 NXPE3Q969Y0 559 aa9.54□□□□□ -0.88
LINC01088-203ENST00000507476 MYRFLQ96LU7 910 aa9.54□□□□□ -0.88
LINC01088-203ENST00000507476 OSMRQ99650 979 aa9.54□□□□□ -0.88
LINC01088-203ENST00000507476 C7orf69Q9H7B7 122 aa9.54□□□□□ -0.88
LINC01088-203ENST00000507476 PCMTD2Q9NV79 361 aa9.54□□□□□ -0.88
LINC01088-203ENST00000507476 FOXD3Q9UJU5 478 aaPredicted RBP9.54□□□□□ -0.88
LINC01088-203ENST00000507476 FZD6O60353 706 aa9.53□□□□□ -0.88
LINC01088-203ENST00000507476 MED26O95402 600 aa9.53□□□□□ -0.88
LINC01088-203ENST00000507476 TRIM42Q8IWZ5 723 aa9.53□□□□□ -0.88
LINC01088-203ENST00000507476 HMX2A2RU54 273 aa9.52□□□□□ -0.89
LINC01088-203ENST00000507476 PHACTR2O75167 634 aa9.52□□□□□ -0.89
LINC01088-203ENST00000507476 TGFB1P01137 390 aa9.52□□□□□ -0.89
LINC01088-203ENST00000507476 VN1R5Q7Z5H4 357 aa9.52□□□□□ -0.89
LINC01088-203ENST00000507476 ZDHHC13Q8IUH4 622 aa9.52□□□□□ -0.89
LINC01088-203ENST00000507476 SNX29Q8TEQ0 813 aa9.52□□□□□ -0.89
LINC01088-203ENST00000507476 FAM13AO94988 1023 aa9.51□□□□□ -0.89
LINC01088-203ENST00000507476 PREPP48147 710 aa9.51□□□□□ -0.89
LINC01088-203ENST00000507476 NFIAQ12857 509 aa9.51□□□□□ -0.89
LINC01088-203ENST00000507476 AAMPQ13685 434 aa9.51□□□□□ -0.89
LINC01088-203ENST00000507476 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.51□□□□□ -0.89
LINC01088-203ENST00000507476 RNF208Q9H0X6 261 aa9.51□□□□□ -0.89
LINC01088-203ENST00000507476 SOX1O00570 391 aaPredicted RBP9.5□□□□□ -0.89
LINC01088-203ENST00000507476 C19orf57Q0VDD7 668 aa9.5□□□□□ -0.89
LINC01088-203ENST00000507476 ANKRD34AQ69YU3 496 aa9.5□□□□□ -0.89
LINC01088-203ENST00000507476 FAM20CQ8IXL6 584 aa9.5□□□□□ -0.89
LINC01088-203ENST00000507476 BSNDQ8WZ55 320 aa9.5□□□□□ -0.89
LINC01088-203ENST00000507476 RUSC1Q9BVN2 902 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms