RNA–Protein interactions for RNA: ENST00000507320.5

TRIM6-209, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-209ENST00000507320 UBE4AQ14139 1066 aa13.14□□□□□ -0.31
TRIM6-209ENST00000507320 C16orf71Q8IYS4 520 aaPredicted RBP13.14□□□□□ -0.31
TRIM6-209ENST00000507320 RTKN2Q8IZC4 609 aa13.14□□□□□ -0.31
TRIM6-209ENST00000507320 RTFDC1Q9BY42 306 aaPredicted RBP13.14□□□□□ -0.31
TRIM6-209ENST00000507320 LNPKQ9C0E8 428 aa13.14□□□□□ -0.31
TRIM6-209ENST00000507320 CCDC8Q9H0W5 538 aaPredicted RBP13.14□□□□□ -0.31
TRIM6-209ENST00000507320 GPR108Q9NPR9 543 aa13.14□□□□□ -0.31
TRIM6-209ENST00000507320 PRELPP51888 382 aa13.13□□□□□ -0.31
TRIM6-209ENST00000507320 RASSF7Q02833 373 aa13.13□□□□□ -0.31
TRIM6-209ENST00000507320 GPR162Q16538 588 aa13.13□□□□□ -0.31
TRIM6-209ENST00000507320 AACSQ86V21 672 aa13.13□□□□□ -0.31
TRIM6-209ENST00000507320 SKAP1Q86WV1 359 aa13.13□□□□□ -0.31
TRIM6-209ENST00000507320 CLASRPQ8N2M8 674 aaKnown RBP13.13□□□□□ -0.31
TRIM6-209ENST00000507320 OTUD7AQ8TE49 926 aaPredicted RBP13.13□□□□□ -0.31
TRIM6-209ENST00000507320 LPIN2Q92539 896 aa13.13□□□□□ -0.31
TRIM6-209ENST00000507320 NEUROD6Q96NK8 337 aa13.13□□□□□ -0.31
TRIM6-209ENST00000507320 PSMD1Q99460 953 aa13.13□□□□□ -0.31
TRIM6-209ENST00000507320 DBNLQ9UJU6 430 aaKnown RBP13.13□□□□□ -0.31
TRIM6-209ENST00000507320 ARAP2Q8WZ64 1704 aa13.13□□□□□ -0.31
TRIM6-209ENST00000507320 CCDC88AQ3V6T2 1871 aa13.12□□□□□ -0.31
TRIM6-209ENST00000507320 FKBP4Q02790 459 aaKnown RBP eCLIP13.12□□□□□ -0.31
TRIM6-209ENST00000507320 CHD1LQ86WJ1 897 aa13.12□□□□□ -0.31
TRIM6-209ENST00000507320 DBNDD2Q9BQY9 259 aa13.12□□□□□ -0.31
TRIM6-209ENST00000507320 TAOK3Q9H2K8 898 aa13.12□□□□□ -0.31
TRIM6-209ENST00000507320 ZNF277Q9NRM2 450 aaPredicted RBP13.12□□□□□ -0.31
TRIM6-209ENST00000507320 AKAP2Q9Y2D5 859 aa13.12□□□□□ -0.31
TRIM6-209ENST00000507320 COL4A5P29400 1685 aa13.12□□□□□ -0.31
TRIM6-209ENST00000507320 RIMBP2O15034 1052 aa13.12□□□□□ -0.31
TRIM6-209ENST00000507320 GYG1P46976 350 aa13.12□□□□□ -0.31
TRIM6-209ENST00000507320 GRIPAP1Q4V328 841 aa13.12□□□□□ -0.31
TRIM6-209ENST00000507320 ARHGAP27Q6ZUM4 889 aa13.12□□□□□ -0.31
TRIM6-209ENST00000507320 XAGE2Q96GT9 111 aa13.12□□□□□ -0.31
TRIM6-209ENST00000507320 SBF1O95248 1867 aa13.11□□□□□ -0.31
TRIM6-209ENST00000507320 IFIT1P09914 478 aaKnown RBP13.11□□□□□ -0.31
TRIM6-209ENST00000507320 SLC5A1P13866 664 aa13.11□□□□□ -0.31
TRIM6-209ENST00000507320 BCAMP50895 628 aa13.11□□□□□ -0.31
TRIM6-209ENST00000507320 AOC3Q16853 763 aa13.11□□□□□ -0.31
TRIM6-209ENST00000507320 WASHC4Q2M389 1173 aa13.11□□□□□ -0.31
TRIM6-209ENST00000507320 FAM84BQ96KN1 310 aaPredicted RBP13.11□□□□□ -0.31
TRIM6-209ENST00000507320 MED23Q9ULK4 1368 aa13.11□□□□□ -0.31
TRIM6-209ENST00000507320 CHD4Q14839 1912 aa13.11□□□□□ -0.31
TRIM6-209ENST00000507320 PDE4AP27815 886 aa13.1□□□□□ -0.31
TRIM6-209ENST00000507320 C15orf52Q6ZUT6 534 aaKnown RBP13.1□□□□□ -0.31
TRIM6-209ENST00000507320 LTBP3Q9NS15 1303 aa13.1□□□□□ -0.31
TRIM6-209ENST00000507320 PPIP5K2O43314 1243 aa13.09□□□□□ -0.31
TRIM6-209ENST00000507320 IFIT2P09913 472 aaKnown RBP13.09□□□□□ -0.31
TRIM6-209ENST00000507320 PHKA1P46020 1223 aa13.09□□□□□ -0.31
TRIM6-209ENST00000507320 KIAA2012Q0VF49 1180 aa13.09□□□□□ -0.31
TRIM6-209ENST00000507320 TSHZ3Q63HK5 1081 aa13.09□□□□□ -0.31
TRIM6-209ENST00000507320 ZC3H12CQ9C0D7 883 aaKnown RBP13.09□□□□□ -0.31
TRIM6-209ENST00000507320 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
TRIM6-209ENST00000507320 SALL3Q9BXA9 1300 aa13.09□□□□□ -0.31
TRIM6-209ENST00000507320 IARSP41252 1262 aaKnown RBP13.09□□□□□ -0.31
TRIM6-209ENST00000507320 DOK7Q18PE1 504 aa13.09□□□□□ -0.31
TRIM6-209ENST00000507320 CCDC102BQ68D86 513 aa13.09□□□□□ -0.31
TRIM6-209ENST00000507320 FBXO33Q7Z6M2 555 aa13.09□□□□□ -0.31
TRIM6-209ENST00000507320 SUPT20HQ8NEM7 779 aa13.09□□□□□ -0.31
TRIM6-209ENST00000507320 EYA3Q99504 573 aa13.09□□□□□ -0.31
TRIM6-209ENST00000507320 DBNDD1Q9H9R9 158 aa13.09□□□□□ -0.31
TRIM6-209ENST00000507320 IQSEC3Q9UPP2 1182 aaPredicted RBP13.09□□□□□ -0.31
TRIM6-209ENST00000507320 SCN9AQ15858 1988 aa13.08□□□□□ -0.32
TRIM6-209ENST00000507320 HIBADHP31937 336 aaKnown RBP13.07□□□□□ -0.32
TRIM6-209ENST00000507320 CAVIN4Q5BKX8 364 aa13.07□□□□□ -0.32
TRIM6-209ENST00000507320 GORABQ5T7V8 394 aa13.07□□□□□ -0.32
TRIM6-209ENST00000507320 LARGE2Q8N3Y3 721 aa13.07□□□□□ -0.32
TRIM6-209ENST00000507320 CD209Q9NNX6 404 aa13.07□□□□□ -0.32
TRIM6-209ENST00000507320 AKAP11Q9UKA4 1901 aa13.07□□□□□ -0.32
TRIM6-209ENST00000507320 GRIN3BO60391 1043 aa13.07□□□□□ -0.32
TRIM6-209ENST00000507320 MX1P20591 662 aa13.07□□□□□ -0.32
TRIM6-209ENST00000507320 SCARF1Q14162 830 aa13.07□□□□□ -0.32
TRIM6-209ENST00000507320 VPS37DQ86XT2 251 aa13.07□□□□□ -0.32
TRIM6-209ENST00000507320 PLEKHM2Q8IWE5 1019 aa13.07□□□□□ -0.32
TRIM6-209ENST00000507320 KCNQ5Q9NR82 932 aa13.07□□□□□ -0.32
TRIM6-209ENST00000507320 MYH13Q9UKX3 1938 aa13.06□□□□□ -0.32
TRIM6-209ENST00000507320 DICER1Q9UPY3 1922 aaKnown RBP13.06□□□□□ -0.32
TRIM6-209ENST00000507320 COL1A1P02452 1464 aaPredicted RBP13.06□□□□□ -0.32
TRIM6-209ENST00000507320 YDJCA8MPS7 323 aa13.06□□□□□ -0.32
TRIM6-209ENST00000507320 PDE1AP54750 535 aa13.06□□□□□ -0.32
TRIM6-209ENST00000507320 CCDC158Q5M9N0 1113 aa13.06□□□□□ -0.32
TRIM6-209ENST00000507320 PI16Q6UXB8 463 aa13.06□□□□□ -0.32
TRIM6-209ENST00000507320 ZNF804AQ7Z570 1209 aa13.06□□□□□ -0.32
TRIM6-209ENST00000507320 COA1Q9GZY4 146 aa13.06□□□□□ -0.32
TRIM6-209ENST00000507320 ECE2O60344 883 aa13.05□□□□□ -0.32
TRIM6-209ENST00000507320 IL1R1P14778 569 aa13.05□□□□□ -0.32
TRIM6-209ENST00000507320 LMNB1P20700 586 aa13.05□□□□□ -0.32
TRIM6-209ENST00000507320 ARID4AP29374 1257 aaPredicted RBP13.05□□□□□ -0.32
TRIM6-209ENST00000507320 MCAMP43121 646 aa13.05□□□□□ -0.32
TRIM6-209ENST00000507320 RASGRF1Q13972 1273 aa13.05□□□□□ -0.32
TRIM6-209ENST00000507320 TTC39AQ5SRH9 613 aa13.05□□□□□ -0.32
TRIM6-209ENST00000507320 TDRD7Q8NHU6 1098 aaKnown RBP13.05□□□□□ -0.32
TRIM6-209ENST00000507320 PI4K2BQ8TCG2 481 aa13.05□□□□□ -0.32
TRIM6-209ENST00000507320 VPS33BQ9H267 617 aa13.05□□□□□ -0.32
TRIM6-209ENST00000507320 ECHDC1Q9NTX5 307 aa13.05□□□□□ -0.32
TRIM6-209ENST00000507320 JAG2Q9Y219 1238 aa13.05□□□□□ -0.32
TRIM6-209ENST00000507320 NDUFB9Q9Y6M9 179 aa13.05□□□□□ -0.32
TRIM6-209ENST00000507320 ZNF646O15015 1829 aaPredicted RBP13.04□□□□□ -0.32
TRIM6-209ENST00000507320 G3V3G9 751 aa13.04□□□□□ -0.32
TRIM6-209ENST00000507320 RGS3P49796 1198 aa13.04□□□□□ -0.32
TRIM6-209ENST00000507320 DCAF8Q5TAQ9 597 aa13.04□□□□□ -0.32
TRIM6-209ENST00000507320 PODNQ7Z5L7 613 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms