RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 SLC16A10Q8TF71 515 aa9.67□□□□□ -0.86
NR1I3-224ENST00000507215 ZNF594Q96JF6 807 aaPredicted RBP9.67□□□□□ -0.86
NR1I3-224ENST00000507215 ESYT1Q9BSJ8 1104 aa9.67□□□□□ -0.86
NR1I3-224ENST00000507215 CARD10Q9BWT7 1032 aa9.67□□□□□ -0.86
NR1I3-224ENST00000507215 VRTNQ9H8Y1 702 aa9.67□□□□□ -0.86
NR1I3-224ENST00000507215 DNAAF2Q9NVR5 837 aaKnown RBP9.67□□□□□ -0.86
NR1I3-224ENST00000507215 USP6P35125 1406 aa9.66□□□□□ -0.86
NR1I3-224ENST00000507215 INHAP05111 366 aa9.66□□□□□ -0.86
NR1I3-224ENST00000507215 CENPCQ03188 943 aa9.66□□□□□ -0.86
NR1I3-224ENST00000507215 PTK7Q13308 1070 aa9.66□□□□□ -0.86
NR1I3-224ENST00000507215 TRIM50Q86XT4 487 aa9.66□□□□□ -0.86
NR1I3-224ENST00000507215 TPCN2Q8NHX9 752 aa9.66□□□□□ -0.86
NR1I3-224ENST00000507215 ARXQ96QS3 562 aa9.66□□□□□ -0.86
NR1I3-224ENST00000507215 SENP2Q9HC62 589 aa9.66□□□□□ -0.86
NR1I3-224ENST00000507215 CPSF1Q10570 1443 aaKnown RBP9.65□□□□□ -0.86
NR1I3-224ENST00000507215 QRICH2Q9H0J4 1663 aa9.65□□□□□ -0.86
NR1I3-224ENST00000507215 RNF144AP50876 292 aaPredicted RBP9.65□□□□□ -0.86
NR1I3-224ENST00000507215 CCDC102BQ68D86 513 aa9.65□□□□□ -0.86
NR1I3-224ENST00000507215 ZNF787Q6DD87 383 aa9.65□□□□□ -0.86
NR1I3-224ENST00000507215 MARCH10Q8NA82 808 aaPredicted RBP9.65□□□□□ -0.86
NR1I3-224ENST00000507215 GRIP2Q9C0E4 1043 aa9.65□□□□□ -0.86
NR1I3-224ENST00000507215 ZNF358Q9NW07 568 aa9.65□□□□□ -0.86
NR1I3-224ENST00000507215 SERTAD1Q9UHV2 236 aa9.65□□□□□ -0.86
NR1I3-224ENST00000507215 TNS2Q63HR2 1409 aa9.65□□□□□ -0.87
NR1I3-224ENST00000507215 RAB3GAP2Q9H2M9 1393 aa9.64□□□□□ -0.87
NR1I3-224ENST00000507215 CENPJQ9HC77 1338 aaPredicted RBP9.64□□□□□ -0.87
NR1I3-224ENST00000507215 SFI1A8K8P3 1242 aa9.64□□□□□ -0.87
NR1I3-224ENST00000507215 USP17L15C9J2P7 530 aa9.64□□□□□ -0.87
NR1I3-224ENST00000507215 USP17L10C9JJH3 530 aa9.64□□□□□ -0.87
NR1I3-224ENST00000507215 USP17L13C9JLJ4 530 aa9.64□□□□□ -0.87
NR1I3-224ENST00000507215 USP17L12C9JPN9 530 aa9.64□□□□□ -0.87
NR1I3-224ENST00000507215 USP17L11C9JVI0 530 aa9.64□□□□□ -0.87
NR1I3-224ENST00000507215 USP17L21D6R901 530 aa9.64□□□□□ -0.87
NR1I3-224ENST00000507215 USP17L18D6R9N7 530 aa9.64□□□□□ -0.87
NR1I3-224ENST00000507215 USP17L22D6RA61 530 aa9.64□□□□□ -0.87
NR1I3-224ENST00000507215 USP17L17D6RBQ6 530 aa9.64□□□□□ -0.87
NR1I3-224ENST00000507215 USP17L19D6RCP7 530 aa9.64□□□□□ -0.87
NR1I3-224ENST00000507215 USP17L20D6RJB6 530 aa9.64□□□□□ -0.87
NR1I3-224ENST00000507215 CSB-PGBD3P0DP91 1061 aa9.64□□□□□ -0.87
NR1I3-224ENST00000507215 USP17L24Q0WX57 530 aa9.64□□□□□ -0.87
NR1I3-224ENST00000507215 SIX5Q8N196 739 aa9.64□□□□□ -0.87
NR1I3-224ENST00000507215 LARGE2Q8N3Y3 721 aa9.64□□□□□ -0.87
NR1I3-224ENST00000507215 NHSQ6T4R5 1651 aa9.64□□□□□ -0.87
NR1I3-224ENST00000507215 TRPM1Q7Z4N2 1603 aa9.64□□□□□ -0.87
NR1I3-224ENST00000507215 COL18A1P39060 1754 aa9.63□□□□□ -0.87
NR1I3-224ENST00000507215 TTC21AQ8NDW8 1320 aa9.63□□□□□ -0.87
NR1I3-224ENST00000507215 POLD1P28340 1107 aa9.63□□□□□ -0.87
NR1I3-224ENST00000507215 ATP1A2P50993 1020 aa9.63□□□□□ -0.87
NR1I3-224ENST00000507215 GPR162Q16538 588 aa9.63□□□□□ -0.87
NR1I3-224ENST00000507215 ARHGEF25Q86VW2 580 aa9.63□□□□□ -0.87
NR1I3-224ENST00000507215 KIFC2Q96AC6 838 aa9.63□□□□□ -0.87
NR1I3-224ENST00000507215 NLRP3Q96P20 1036 aa9.63□□□□□ -0.87
NR1I3-224ENST00000507215 USP3Q9Y6I4 520 aa9.63□□□□□ -0.87
NR1I3-224ENST00000507215 FAM196BA6NMK8 535 aa9.62□□□□□ -0.87
NR1I3-224ENST00000507215 GRIN3BO60391 1043 aa9.62□□□□□ -0.87
NR1I3-224ENST00000507215 SLC27A3Q5K4L6 730 aa9.62□□□□□ -0.87
NR1I3-224ENST00000507215 PRICKLE2Q7Z3G6 844 aa9.62□□□□□ -0.87
NR1I3-224ENST00000507215 SLC4A9Q96Q91 983 aa9.62□□□□□ -0.87
NR1I3-224ENST00000507215 CEP350Q5VT06 3117 aa9.62□□□□□ -0.87
NR1I3-224ENST00000507215 QSER1Q2KHR3 1735 aa9.62□□□□□ -0.87
NR1I3-224ENST00000507215 EVC2Q86UK5 1308 aa9.61□□□□□ -0.87
NR1I3-224ENST00000507215 ZBTB7CA1YPR0 619 aa9.61□□□□□ -0.87
NR1I3-224ENST00000507215 MAN1A2O60476 641 aa9.61□□□□□ -0.87
NR1I3-224ENST00000507215 GPC1P35052 558 aa9.61□□□□□ -0.87
NR1I3-224ENST00000507215 EPHA4P54764 986 aa9.61□□□□□ -0.87
NR1I3-224ENST00000507215 DPYDQ12882 1025 aa9.61□□□□□ -0.87
NR1I3-224ENST00000507215 ANKMY2Q8IV38 441 aa9.61□□□□□ -0.87
NR1I3-224ENST00000507215 PBXIP1Q96AQ6 731 aa9.61□□□□□ -0.87
NR1I3-224ENST00000507215 PDGFDQ9GZP0 370 aaPredicted RBP9.61□□□□□ -0.87
NR1I3-224ENST00000507215 ZMIZ1Q9ULJ6 1067 aa9.61□□□□□ -0.87
NR1I3-224ENST00000507215 PIK3C2AO00443 1686 aa9.61□□□□□ -0.87
NR1I3-224ENST00000507215 PAPPAQ13219 1627 aa9.6□□□□□ -0.87
NR1I3-224ENST00000507215 LGR5O75473 907 aa9.6□□□□□ -0.87
NR1I3-224ENST00000507215 RHOQP17081 205 aa9.6□□□□□ -0.87
NR1I3-224ENST00000507215 SMTNP53814 917 aa9.6□□□□□ -0.87
NR1I3-224ENST00000507215 TLR1Q15399 786 aa9.6□□□□□ -0.87
NR1I3-224ENST00000507215 TNS4Q8IZW8 715 aa9.6□□□□□ -0.87
NR1I3-224ENST00000507215 CABP1Q9NZU7 370 aa9.6□□□□□ -0.87
NR1I3-224ENST00000507215 GOLGB1Q14789 3259 aaKnown RBP9.6□□□□□ -0.87
NR1I3-224ENST00000507215 POU4F2Q12837 409 aa9.59□□□□□ -0.87
NR1I3-224ENST00000507215 ZNF295-AS1Q8N0V1 137 aa9.59□□□□□ -0.87
NR1I3-224ENST00000507215 TSEN2Q8NCE0 465 aaKnown RBP9.59□□□□□ -0.87
NR1I3-224ENST00000507215 IQSEC3Q9UPP2 1182 aaPredicted RBP9.59□□□□□ -0.87
NR1I3-224ENST00000507215 COL24A1Q17RW2 1714 aa9.59□□□□□ -0.87
NR1I3-224ENST00000507215 A6NJY4 79 aa9.58□□□□□ -0.88
NR1I3-224ENST00000507215 ATG7O95352 703 aa9.58□□□□□ -0.88
NR1I3-224ENST00000507215 IL2RBP14784 551 aa9.58□□□□□ -0.88
NR1I3-224ENST00000507215 MTFR1Q15390 333 aa9.58□□□□□ -0.88
NR1I3-224ENST00000507215 PTF1AQ7RTS3 328 aa9.58□□□□□ -0.88
NR1I3-224ENST00000507215 LYSMD3Q7Z3D4 306 aa9.58□□□□□ -0.88
NR1I3-224ENST00000507215 STK32AQ8WU08 396 aa9.58□□□□□ -0.88
NR1I3-224ENST00000507215 ZSCAN10Q96SZ4 725 aaPredicted RBP9.58□□□□□ -0.88
NR1I3-224ENST00000507215 NOVA2Q9UNW9 492 aaKnown RBP9.58□□□□□ -0.88
NR1I3-224ENST00000507215 TTC21BQ7Z4L5 1316 aa9.57□□□□□ -0.88
NR1I3-224ENST00000507215 NFAT5O94916 1531 aa9.57□□□□□ -0.88
NR1I3-224ENST00000507215 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.57□□□□□ -0.88
NR1I3-224ENST00000507215 TBCELQ5QJ74 424 aa9.57□□□□□ -0.88
NR1I3-224ENST00000507215 BTAF1O14981 1849 aa9.56□□□□□ -0.88
NR1I3-224ENST00000507215 SPATA31C2B4DYI2 1134 aa9.56□□□□□ -0.88
NR1I3-224ENST00000507215 SEC13P55735 322 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 219.5 ms