RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 IRF7Q92985 503 aa7.18□□□□□ -1.26
CLDND1-213ENST00000506927 SYAP1Q96A49 352 aaPredicted RBP7.18□□□□□ -1.26
CLDND1-213ENST00000506927 MKRN1Q9UHC7 482 aaKnown RBP7.18□□□□□ -1.26
CLDND1-213ENST00000506927 MAFBQ9Y5Q3 323 aaPredicted RBP7.18□□□□□ -1.26
CLDND1-213ENST00000506927 YEATS2Q9ULM3 1422 aa7.18□□□□□ -1.26
CLDND1-213ENST00000506927 NEXMIFQ5QGS0 1516 aa7.17□□□□□ -1.26
CLDND1-213ENST00000506927 SPATA31C2B4DYI2 1134 aa7.17□□□□□ -1.26
CLDND1-213ENST00000506927 WASLO00401 505 aaPredicted RBP7.17□□□□□ -1.26
CLDND1-213ENST00000506927 MSNP26038 577 aaKnown RBP7.17□□□□□ -1.26
CLDND1-213ENST00000506927 INSM1Q01101 510 aaPredicted RBP7.17□□□□□ -1.26
CLDND1-213ENST00000506927 TLR1Q15399 786 aa7.17□□□□□ -1.26
CLDND1-213ENST00000506927 KLHL40Q2TBA0 621 aa7.17□□□□□ -1.26
CLDND1-213ENST00000506927 TRIM50Q86XT4 487 aa7.17□□□□□ -1.26
CLDND1-213ENST00000506927 NAP1L5Q96NT1 182 aaPredicted RBP7.17□□□□□ -1.26
CLDND1-213ENST00000506927 SERTAD1Q9UHV2 236 aa7.17□□□□□ -1.26
CLDND1-213ENST00000506927 PTPRCP08575 1304 aa7.17□□□□□ -1.26
CLDND1-213ENST00000506927 SOS1Q07889 1333 aaPredicted RBP7.17□□□□□ -1.26
CLDND1-213ENST00000506927 KIF20BQ96Q89 1820 aa7.17□□□□□ -1.26
CLDND1-213ENST00000506927 A0A1W2PP64 1363 aa7.17□□□□□ -1.26
CLDND1-213ENST00000506927 AATKQ6ZMQ8 1374 aa7.17□□□□□ -1.26
CLDND1-213ENST00000506927 PTCH1Q13635 1447 aa7.17□□□□□ -1.26
CLDND1-213ENST00000506927 DLC1Q96QB1 1528 aa7.17□□□□□ -1.26
CLDND1-213ENST00000506927 TULP4Q9NRJ4 1543 aa7.17□□□□□ -1.26
CLDND1-213ENST00000506927 FYB1O15117 783 aa7.16□□□□□ -1.26
CLDND1-213ENST00000506927 ZBTB7BO15156 539 aaPredicted RBP7.16□□□□□ -1.26
CLDND1-213ENST00000506927 MBD3O95983 291 aa7.16□□□□□ -1.26
CLDND1-213ENST00000506927 NCLP19338 710 aaKnown RBP7.16□□□□□ -1.26
CLDND1-213ENST00000506927 ITGA6P23229 1130 aa7.16□□□□□ -1.26
CLDND1-213ENST00000506927 CLDN10P78369 228 aa7.16□□□□□ -1.26
CLDND1-213ENST00000506927 TMEM132EQ6IEE7 984 aa7.16□□□□□ -1.26
CLDND1-213ENST00000506927 TMEM214Q6NUQ4 689 aaKnown RBP7.16□□□□□ -1.26
CLDND1-213ENST00000506927 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.16□□□□□ -1.26
CLDND1-213ENST00000506927 TAS1R3Q7RTX0 852 aa7.16□□□□□ -1.26
CLDND1-213ENST00000506927 BCL2L13Q9BXK5 485 aa7.16□□□□□ -1.26
CLDND1-213ENST00000506927 KIAA1024Q9UPX6 916 aa7.16□□□□□ -1.26
CLDND1-213ENST00000506927 YTHDC2Q9H6S0 1430 aaKnown RBP7.16□□□□□ -1.26
CLDND1-213ENST00000506927 VSIG8P0DPA2 414 aa7.15□□□□□ -1.26
CLDND1-213ENST00000506927 DDIT3P35638 169 aa7.15□□□□□ -1.26
CLDND1-213ENST00000506927 GMPRP36959 345 aa7.15□□□□□ -1.26
CLDND1-213ENST00000506927 PHKA2P46019 1235 aa7.15□□□□□ -1.26
CLDND1-213ENST00000506927 ATP1A2P50993 1020 aa7.15□□□□□ -1.26
CLDND1-213ENST00000506927 SMTNP53814 917 aa7.15□□□□□ -1.26
CLDND1-213ENST00000506927 HSP90AA2PQ14568 343 aaPredicted RBP7.15□□□□□ -1.26
CLDND1-213ENST00000506927 WDR44Q5JSH3 913 aa7.15□□□□□ -1.26
CLDND1-213ENST00000506927 OGFOD1Q8N543 542 aa7.15□□□□□ -1.26
CLDND1-213ENST00000506927 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.15□□□□□ -1.26
CLDND1-213ENST00000506927 TNPO1Q92973 898 aaKnown RBP7.15□□□□□ -1.26
CLDND1-213ENST00000506927 SLC4A9Q96Q91 983 aa7.15□□□□□ -1.26
CLDND1-213ENST00000506927 LNPKQ9C0E8 428 aa7.15□□□□□ -1.26
CLDND1-213ENST00000506927 EDC4Q6P2E9 1401 aaKnown RBP7.15□□□□□ -1.27
CLDND1-213ENST00000506927 COL3A1P02461 1466 aaPredicted RBP7.15□□□□□ -1.27
CLDND1-213ENST00000506927 ABCC4O15439 1325 aa7.14□□□□□ -1.27
CLDND1-213ENST00000506927 LETM1O95202 739 aaPredicted RBP7.14□□□□□ -1.27
CLDND1-213ENST00000506927 GTF2E1P29083 439 aaPredicted RBP7.14□□□□□ -1.27
CLDND1-213ENST00000506927 LMOD1P29536 600 aaPredicted RBP7.14□□□□□ -1.27
CLDND1-213ENST00000506927 NASPP49321 788 aaPredicted RBP7.14□□□□□ -1.27
CLDND1-213ENST00000506927 CPSF1Q10570 1443 aaKnown RBP7.14□□□□□ -1.27
CLDND1-213ENST00000506927 TWISTNBQ3B726 338 aaPredicted RBP7.14□□□□□ -1.27
CLDND1-213ENST00000506927 FAM135BQ49AJ0 1406 aa7.14□□□□□ -1.27
CLDND1-213ENST00000506927 C4orf17Q53FE4 359 aa7.14□□□□□ -1.27
CLDND1-213ENST00000506927 GNASQ5JWF2 1037 aa7.14□□□□□ -1.27
CLDND1-213ENST00000506927 CCDC102BQ68D86 513 aa7.14□□□□□ -1.27
CLDND1-213ENST00000506927 TPCN2Q8NHX9 752 aa7.14□□□□□ -1.27
CLDND1-213ENST00000506927 TSR2Q969E8 191 aaKnown RBP7.14□□□□□ -1.27
CLDND1-213ENST00000506927 COG3Q96JB2 828 aa7.14□□□□□ -1.27
CLDND1-213ENST00000506927 PPP1R9BQ96SB3 815 aa7.14□□□□□ -1.27
CLDND1-213ENST00000506927 CDK19Q9BWU1 502 aa7.14□□□□□ -1.27
CLDND1-213ENST00000506927 SRCIN1Q9C0H9 1055 aa7.14□□□□□ -1.27
CLDND1-213ENST00000506927 DCTPP1Q9H773 170 aa7.14□□□□□ -1.27
CLDND1-213ENST00000506927 TIMMDC1Q9NPL8 285 aa7.14□□□□□ -1.27
CLDND1-213ENST00000506927 DNAAF2Q9NVR5 837 aaKnown RBP7.14□□□□□ -1.27
CLDND1-213ENST00000506927 ZNF358Q9NW07 568 aa7.14□□□□□ -1.27
CLDND1-213ENST00000506927 CUEDC1Q9NWM3 386 aaPredicted RBP7.14□□□□□ -1.27
CLDND1-213ENST00000506927 CDK12Q9NYV4 1490 aaPredicted RBP7.14□□□□□ -1.27
CLDND1-213ENST00000506927 HDAC5Q9UQL6 1122 aa7.14□□□□□ -1.27
CLDND1-213ENST00000506927 DYRK1BQ9Y463 629 aa7.14□□□□□ -1.27
CLDND1-213ENST00000506927 DDX49Q9Y6V7 483 aaKnown RBP7.14□□□□□ -1.27
CLDND1-213ENST00000506927 KIAA0232Q92628 1395 aa7.13□□□□□ -1.27
CLDND1-213ENST00000506927 CDC14CA4D256 554 aa7.13□□□□□ -1.27
CLDND1-213ENST00000506927 A6NJY4 79 aa7.13□□□□□ -1.27
CLDND1-213ENST00000506927 BACH1O14867 736 aa7.13□□□□□ -1.27
CLDND1-213ENST00000506927 WIPF1O43516 503 aa7.13□□□□□ -1.27
CLDND1-213ENST00000506927 VAMP4O75379 141 aa7.13□□□□□ -1.27
CLDND1-213ENST00000506927 PRKAR2BP31323 418 aa7.13□□□□□ -1.27
CLDND1-213ENST00000506927 ZNF445P59923 1031 aa7.13□□□□□ -1.27
CLDND1-213ENST00000506927 ANAPC15P60006 121 aa7.13□□□□□ -1.27
CLDND1-213ENST00000506927 ZSCAN30Q86W11 494 aa7.13□□□□□ -1.27
CLDND1-213ENST00000506927 VWA5B2Q8N398 1253 aa7.13□□□□□ -1.27
CLDND1-213ENST00000506927 LARGE2Q8N3Y3 721 aa7.13□□□□□ -1.27
CLDND1-213ENST00000506927 GPR161Q8N6U8 529 aaKnown RBP7.13□□□□□ -1.27
CLDND1-213ENST00000506927 RHBDD1Q8TEB9 315 aa7.13□□□□□ -1.27
CLDND1-213ENST00000506927 NANOS1Q8WY41 292 aaKnown RBP7.13□□□□□ -1.27
CLDND1-213ENST00000506927 ZNF594Q96JF6 807 aaPredicted RBP7.13□□□□□ -1.27
CLDND1-213ENST00000506927 PRAM1Q96QH2 718 aa7.13□□□□□ -1.27
CLDND1-213ENST00000506927 GAS2L1Q99501 681 aaPredicted RBP7.13□□□□□ -1.27
CLDND1-213ENST00000506927 GZF1Q9H116 711 aaPredicted RBP7.13□□□□□ -1.27
CLDND1-213ENST00000506927 GGNBP2Q9H3C7 697 aa7.13□□□□□ -1.27
CLDND1-213ENST00000506927 ARHGEF40Q8TER5 1519 aa7.12□□□□□ -1.27
CLDND1-213ENST00000506927 PTPRMP28827 1452 aa7.12□□□□□ -1.27
CLDND1-213ENST00000506927 ERC2O15083 957 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms