RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 UTYO14607 1347 aa9.12□□□□□ -0.95
GYPB-206ENST00000506516 KDM2BQ8NHM5 1336 aa9.12□□□□□ -0.95
GYPB-206ENST00000506516 C6orf229H3BNL8 230 aa9.12□□□□□ -0.95
GYPB-206ENST00000506516 PRELPP51888 382 aa9.12□□□□□ -0.95
GYPB-206ENST00000506516 FOXO4P98177 505 aa9.12□□□□□ -0.95
GYPB-206ENST00000506516 DSG2Q14126 1118 aa9.12□□□□□ -0.95
GYPB-206ENST00000506516 TAF7LQ5H9L4 462 aa9.12□□□□□ -0.95
GYPB-206ENST00000506516 INTS3Q68E01 1043 aaKnown RBP9.12□□□□□ -0.95
GYPB-206ENST00000506516 LARGE2Q8N3Y3 721 aa9.12□□□□□ -0.95
GYPB-206ENST00000506516 ZNF526Q8TF50 670 aaPredicted RBP9.12□□□□□ -0.95
GYPB-206ENST00000506516 YTHDC1Q96MU7 727 aaKnown RBP9.12□□□□□ -0.95
GYPB-206ENST00000506516 EYA3Q99504 573 aa9.12□□□□□ -0.95
GYPB-206ENST00000506516 RTFDC1Q9BY42 306 aaPredicted RBP9.12□□□□□ -0.95
GYPB-206ENST00000506516 USP44Q9H0E7 712 aa9.12□□□□□ -0.95
GYPB-206ENST00000506516 BSDC1Q9NW68 430 aaPredicted RBP9.12□□□□□ -0.95
GYPB-206ENST00000506516 ANKIB1Q9P2G1 1089 aa9.12□□□□□ -0.95
GYPB-206ENST00000506516 SLX4Q8IY92 1834 aa9.12□□□□□ -0.95
GYPB-206ENST00000506516 C2orf72A6NCS6 295 aa9.11□□□□□ -0.95
GYPB-206ENST00000506516 GLTPD2A6NH11 291 aa9.11□□□□□ -0.95
GYPB-206ENST00000506516 PPIP5K2O43314 1243 aa9.11□□□□□ -0.95
GYPB-206ENST00000506516 UBTFL1P0CB47 393 aaPredicted RBP9.11□□□□□ -0.95
GYPB-206ENST00000506516 MS4A1P11836 297 aa9.11□□□□□ -0.95
GYPB-206ENST00000506516 TRIM27P14373 513 aa9.11□□□□□ -0.95
GYPB-206ENST00000506516 GPSM2P81274 684 aa9.11□□□□□ -0.95
GYPB-206ENST00000506516 FOXK1P85037 733 aa9.11□□□□□ -0.95
GYPB-206ENST00000506516 WASHC4Q2M389 1173 aa9.11□□□□□ -0.95
GYPB-206ENST00000506516 FAM161AQ3B820 660 aa9.11□□□□□ -0.95
GYPB-206ENST00000506516 FTSJ3Q8IY81 847 aaKnown RBP9.11□□□□□ -0.95
GYPB-206ENST00000506516 SUCLG2Q96I99 432 aa9.11□□□□□ -0.95
GYPB-206ENST00000506516 CHD4Q14839 1912 aa9.11□□□□□ -0.95
GYPB-206ENST00000506516 KIF3CO14782 793 aa9.1□□□□□ -0.95
GYPB-206ENST00000506516 GNAI3P08754 354 aa9.1□□□□□ -0.95
GYPB-206ENST00000506516 ATP2B4P23634 1241 aa9.1□□□□□ -0.95
GYPB-206ENST00000506516 EIF6P56537 245 aaKnown RBP9.1□□□□□ -0.95
GYPB-206ENST00000506516 EPHA10Q5JZY3 1008 aa9.1□□□□□ -0.95
GYPB-206ENST00000506516 NIM1KQ8IY84 436 aa9.1□□□□□ -0.95
GYPB-206ENST00000506516 DZIP1LQ8IYY4 767 aaKnown RBP9.1□□□□□ -0.95
GYPB-206ENST00000506516 SLAIN1Q8ND83 568 aa9.1□□□□□ -0.95
GYPB-206ENST00000506516 CLUAP1Q96AJ1 413 aa9.1□□□□□ -0.95
GYPB-206ENST00000506516 ZC3H12CQ9C0D7 883 aaKnown RBP9.1□□□□□ -0.95
GYPB-206ENST00000506516 ANKRD2Q9GZV1 360 aa9.1□□□□□ -0.95
GYPB-206ENST00000506516 PODXL2Q9NZ53 605 aa9.1□□□□□ -0.95
GYPB-206ENST00000506516 GGA1Q9UJY5 639 aa9.1□□□□□ -0.95
GYPB-206ENST00000506516 RCAN3Q9UKA8 241 aa9.1□□□□□ -0.95
GYPB-206ENST00000506516 DDX60Q8IY21 1712 aaKnown RBP9.1□□□□□ -0.95
GYPB-206ENST00000506516 XDHP47989 1333 aa9.09□□□□□ -0.95
GYPB-206ENST00000506516 FZD9O00144 591 aa9.09□□□□□ -0.95
GYPB-206ENST00000506516 KIAA2012Q0VF49 1180 aa9.09□□□□□ -0.95
GYPB-206ENST00000506516 AOC3Q16853 763 aa9.09□□□□□ -0.95
GYPB-206ENST00000506516 RABL6Q3YEC7 729 aaPredicted RBP9.09□□□□□ -0.95
GYPB-206ENST00000506516 LDHAL6AQ6ZMR3 332 aa9.09□□□□□ -0.95
GYPB-206ENST00000506516 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.09□□□□□ -0.95
GYPB-206ENST00000506516 TBC1D16Q8TBP0 767 aa9.09□□□□□ -0.95
GYPB-206ENST00000506516 KAZALD1Q96I82 304 aa9.09□□□□□ -0.95
GYPB-206ENST00000506516 BICC1Q9H694 974 aaKnown RBP9.09□□□□□ -0.95
GYPB-206ENST00000506516 CNNM1Q9NRU3 951 aa9.09□□□□□ -0.95
GYPB-206ENST00000506516 POLLQ9UGP5 575 aa9.09□□□□□ -0.95
GYPB-206ENST00000506516 MINPP1Q9UNW1 487 aa9.09□□□□□ -0.95
GYPB-206ENST00000506516 LEMD3Q9Y2U8 911 aa9.09□□□□□ -0.95
GYPB-206ENST00000506516 ARIH1Q9Y4X5 557 aaPredicted RBP9.09□□□□□ -0.95
GYPB-206ENST00000506516 SNED1Q8TER0 1413 aa9.08□□□□□ -0.96
GYPB-206ENST00000506516 RIMBP2O15034 1052 aa9.08□□□□□ -0.96
GYPB-206ENST00000506516 UFL1O94874 794 aa9.08□□□□□ -0.96
GYPB-206ENST00000506516 VEGFAP15692 232 aaPredicted RBP9.08□□□□□ -0.96
GYPB-206ENST00000506516 SLC51AQ86UW1 340 aa9.08□□□□□ -0.96
GYPB-206ENST00000506516 C16orf71Q8IYS4 520 aaPredicted RBP9.08□□□□□ -0.96
GYPB-206ENST00000506516 TMEM57Q8N5G2 664 aa9.08□□□□□ -0.96
GYPB-206ENST00000506516 RRAGCQ9HB90 399 aa9.08□□□□□ -0.96
GYPB-206ENST00000506516 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.08□□□□□ -0.96
GYPB-206ENST00000506516 ZNRF3Q9ULT6 936 aa9.08□□□□□ -0.96
GYPB-206ENST00000506516 LAMB2P55268 1798 aa9.07□□□□□ -0.96
GYPB-206ENST00000506516 FER1L6Q2WGJ9 1857 aa9.07□□□□□ -0.96
GYPB-206ENST00000506516 DDNO94850 711 aaPredicted RBP9.07□□□□□ -0.96
GYPB-206ENST00000506516 GNAI2P04899 355 aa9.07□□□□□ -0.96
GYPB-206ENST00000506516 KCNJ4P48050 445 aa9.07□□□□□ -0.96
GYPB-206ENST00000506516 CHRNDQ07001 517 aa9.07□□□□□ -0.96
GYPB-206ENST00000506516 TNIP1Q15025 636 aa9.07□□□□□ -0.96
GYPB-206ENST00000506516 TMEM92Q6UXU6 159 aa9.07□□□□□ -0.96
GYPB-206ENST00000506516 ITPRIPQ8IWB1 547 aa9.07□□□□□ -0.96
GYPB-206ENST00000506516 PLPP6Q8IY26 295 aa9.07□□□□□ -0.96
GYPB-206ENST00000506516 GPC2Q8N158 579 aa9.07□□□□□ -0.96
GYPB-206ENST00000506516 ANKRD44Q8N8A2 993 aa9.07□□□□□ -0.96
GYPB-206ENST00000506516 ZNF594Q96JF6 807 aaPredicted RBP9.07□□□□□ -0.96
GYPB-206ENST00000506516 MEIS3Q99687 375 aa9.07□□□□□ -0.96
GYPB-206ENST00000506516 ZNF804BA4D1E1 1349 aa9.06□□□□□ -0.96
GYPB-206ENST00000506516 CACNA1SQ13698 1873 aa9.06□□□□□ -0.96
GYPB-206ENST00000506516 IQCA1LA6NCM1 817 aa9.06□□□□□ -0.96
GYPB-206ENST00000506516 TULP1O00294 542 aaPredicted RBP9.06□□□□□ -0.96
GYPB-206ENST00000506516 SEMA3EO15041 775 aa9.06□□□□□ -0.96
GYPB-206ENST00000506516 PLIN1O60240 522 aa9.06□□□□□ -0.96
GYPB-206ENST00000506516 CHMP4BQ9H444 224 aaKnown RBP9.06□□□□□ -0.96
GYPB-206ENST00000506516 TNNQ9UQP3 1299 aa9.06□□□□□ -0.96
GYPB-206ENST00000506516 LRRFIP2Q9Y608 721 aaKnown RBP9.06□□□□□ -0.96
GYPB-206ENST00000506516 GJA3Q9Y6H8 435 aa9.06□□□□□ -0.96
GYPB-206ENST00000506516 MROH5Q6ZUA9 1318 aa9.05□□□□□ -0.96
GYPB-206ENST00000506516 TAF5LO75529 589 aa9.05□□□□□ -0.96
GYPB-206ENST00000506516 CXCL9Q07325 125 aa9.05□□□□□ -0.96
GYPB-206ENST00000506516 DOK7Q18PE1 504 aa9.05□□□□□ -0.96
GYPB-206ENST00000506516 LCE2DQ5TA82 110 aaPredicted RBP9.05□□□□□ -0.96
GYPB-206ENST00000506516 CIAPIN1Q6FI81 312 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms