RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 ALDH1L1O75891 902 aa18.28■□□□□ 0.52
CDC42SE2-209ENST00000506419 GRM1Q13255 1194 aa18.28■□□□□ 0.52
CDC42SE2-209ENST00000506419 SCARF1Q14162 830 aa18.28■□□□□ 0.52
CDC42SE2-209ENST00000506419 DACT2Q5SW24 774 aa18.28■□□□□ 0.52
CDC42SE2-209ENST00000506419 PAXIP1Q6ZW49 1069 aaPredicted RBP18.28■□□□□ 0.52
CDC42SE2-209ENST00000506419 TNS4Q8IZW8 715 aa18.28■□□□□ 0.52
CDC42SE2-209ENST00000506419 HELBQ8NG08 1087 aaPredicted RBP18.28■□□□□ 0.52
CDC42SE2-209ENST00000506419 CDCA7LQ96GN5 454 aa18.28■□□□□ 0.52
CDC42SE2-209ENST00000506419 KAZALD1Q96I82 304 aa18.28■□□□□ 0.52
CDC42SE2-209ENST00000506419 ZNF594Q96JF6 807 aaPredicted RBP18.28■□□□□ 0.52
CDC42SE2-209ENST00000506419 COA1Q9GZY4 146 aa18.28■□□□□ 0.52
CDC42SE2-209ENST00000506419 E9PSI1 815 aa18.27■□□□□ 0.52
CDC42SE2-209ENST00000506419 USP17L8P0C7I0 530 aa18.27■□□□□ 0.52
CDC42SE2-209ENST00000506419 ECE1P42892 770 aa18.27■□□□□ 0.52
CDC42SE2-209ENST00000506419 IFIT5Q13325 482 aaKnown RBP18.27■□□□□ 0.52
CDC42SE2-209ENST00000506419 DCPSQ96C86 337 aaKnown RBP18.27■□□□□ 0.52
CDC42SE2-209ENST00000506419 SRCIN1Q9C0H9 1055 aa18.27■□□□□ 0.52
CDC42SE2-209ENST00000506419 IRS2Q9Y4H2 1338 aa18.26■□□□□ 0.51
CDC42SE2-209ENST00000506419 CTCFP49711 727 aaPredicted RBP18.26■□□□□ 0.51
CDC42SE2-209ENST00000506419 MAP2K1Q02750 393 aaPredicted RBP18.26■□□□□ 0.51
CDC42SE2-209ENST00000506419 SSH1Q8WYL5 1049 aa18.26■□□□□ 0.51
CDC42SE2-209ENST00000506419 AIDAQ96BJ3 306 aa18.26■□□□□ 0.51
CDC42SE2-209ENST00000506419 MYOZ2Q9NPC6 264 aa18.26■□□□□ 0.51
CDC42SE2-209ENST00000506419 C9orf78Q9NZ63 289 aaPredicted RBP18.26■□□□□ 0.51
CDC42SE2-209ENST00000506419 CHMP3Q9Y3E7 222 aa18.26■□□□□ 0.51
CDC42SE2-209ENST00000506419 NBPF7P0C2Y1 421 aaPredicted RBP18.25■□□□□ 0.51
CDC42SE2-209ENST00000506419 LBX1P52954 281 aa18.25■□□□□ 0.51
CDC42SE2-209ENST00000506419 STRIP1Q5VSL9 837 aa18.25■□□□□ 0.51
CDC42SE2-209ENST00000506419 TRMT2AQ8IZ69 625 aaKnown RBP18.25■□□□□ 0.51
CDC42SE2-209ENST00000506419 SUCLG2Q96I99 432 aa18.25■□□□□ 0.51
CDC42SE2-209ENST00000506419 HHIPL1Q96JK4 782 aa18.25■□□□□ 0.51
CDC42SE2-209ENST00000506419 PRDM10Q9NQV6 1147 aa18.25■□□□□ 0.51
CDC42SE2-209ENST00000506419 GGA3Q9NZ52 723 aa18.25■□□□□ 0.51
CDC42SE2-209ENST00000506419 ZNF609O15014 1411 aa18.24■□□□□ 0.51
CDC42SE2-209ENST00000506419 HSPA8P11142 646 aaKnown RBP18.24■□□□□ 0.51
CDC42SE2-209ENST00000506419 MAP2K2P36507 400 aa18.24■□□□□ 0.51
CDC42SE2-209ENST00000506419 ANGEL2Q5VTE6 544 aaKnown RBP18.24■□□□□ 0.51
CDC42SE2-209ENST00000506419 TTLL5Q6EMB2 1281 aa18.24■□□□□ 0.51
CDC42SE2-209ENST00000506419 ZIC5Q96T25 663 aa18.24■□□□□ 0.51
CDC42SE2-209ENST00000506419 CD209Q9NNX6 404 aa18.24■□□□□ 0.51
CDC42SE2-209ENST00000506419 SCAF8Q9UPN6 1271 aaKnown RBP18.24■□□□□ 0.51
CDC42SE2-209ENST00000506419 CACNA1FO60840 1977 aa18.23■□□□□ 0.51
CDC42SE2-209ENST00000506419 HUNKP57058 714 aa18.23■□□□□ 0.51
CDC42SE2-209ENST00000506419 NBPF9Q3BBW0 867 aa18.23■□□□□ 0.51
CDC42SE2-209ENST00000506419 C15orf52Q6ZUT6 534 aaKnown RBP18.23■□□□□ 0.51
CDC42SE2-209ENST00000506419 FBXW7Q969H0 707 aa18.23■□□□□ 0.51
CDC42SE2-209ENST00000506419 UTYO14607 1347 aa18.23■□□□□ 0.51
CDC42SE2-209ENST00000506419 KCNJ4P48050 445 aa18.22■□□□□ 0.51
CDC42SE2-209ENST00000506419 GTF2IP78347 998 aa18.22■□□□□ 0.51
CDC42SE2-209ENST00000506419 CCDC57Q2TAC2 916 aa18.22■□□□□ 0.51
CDC42SE2-209ENST00000506419 LDHAL6AQ6ZMR3 332 aa18.22■□□□□ 0.51
CDC42SE2-209ENST00000506419 SULF1Q8IWU6 871 aa18.22■□□□□ 0.51
CDC42SE2-209ENST00000506419 PUS3Q9BZE2 481 aaKnown RBP18.22■□□□□ 0.51
CDC42SE2-209ENST00000506419 GBA2Q9HCG7 927 aaPredicted RBP18.22■□□□□ 0.51
CDC42SE2-209ENST00000506419 TRPM7Q96QT4 1865 aa18.22■□□□□ 0.51
CDC42SE2-209ENST00000506419 PLIN1O60240 522 aa18.21■□□□□ 0.51
CDC42SE2-209ENST00000506419 CDCA5Q96FF9 252 aa18.21■□□□□ 0.51
CDC42SE2-209ENST00000506419 MYH3P11055 1940 aa18.2■□□□□ 0.5
CDC42SE2-209ENST00000506419 CCER2I3L3R5 266 aa18.2■□□□□ 0.5
CDC42SE2-209ENST00000506419 PRAMEF18Q5VWM3 479 aa18.2■□□□□ 0.5
CDC42SE2-209ENST00000506419 C2orf69Q8N8R5 385 aa18.2■□□□□ 0.5
CDC42SE2-209ENST00000506419 POLR2AP24928 1970 aaKnown RBP18.2■□□□□ 0.5
CDC42SE2-209ENST00000506419 FAM155AB1AL88 458 aaPredicted RBP18.19■□□□□ 0.5
CDC42SE2-209ENST00000506419 WNT10BO00744 389 aa18.19■□□□□ 0.5
CDC42SE2-209ENST00000506419 CAPN15O75808 1086 aa18.19■□□□□ 0.5
CDC42SE2-209ENST00000506419 TAF7LQ5H9L4 462 aa18.19■□□□□ 0.5
CDC42SE2-209ENST00000506419 CERS5Q8N5B7 392 aa18.19■□□□□ 0.5
CDC42SE2-209ENST00000506419 ANKRD44Q8N8A2 993 aa18.19■□□□□ 0.5
CDC42SE2-209ENST00000506419 USP44Q9H0E7 712 aa18.19■□□□□ 0.5
CDC42SE2-209ENST00000506419 CNNM1Q9NRU3 951 aa18.19■□□□□ 0.5
CDC42SE2-209ENST00000506419 PTPRCP08575 1304 aa18.19■□□□□ 0.5
CDC42SE2-209ENST00000506419 IL1R1P14778 569 aa18.18■□□□□ 0.5
CDC42SE2-209ENST00000506419 RABL6Q3YEC7 729 aaPredicted RBP18.18■□□□□ 0.5
CDC42SE2-209ENST00000506419 RGMBQ6NW40 437 aa18.18■□□□□ 0.5
CDC42SE2-209ENST00000506419 KIAA0825Q8IV33 1275 aa18.18■□□□□ 0.5
CDC42SE2-209ENST00000506419 OGFOD1Q8N543 542 aa18.18■□□□□ 0.5
CDC42SE2-209ENST00000506419 ZBED3Q96IU2 234 aaPredicted RBP18.18■□□□□ 0.5
CDC42SE2-209ENST00000506419 BICC1Q9H694 974 aaKnown RBP18.18■□□□□ 0.5
CDC42SE2-209ENST00000506419 TSKSQ9UJT2 592 aa18.18■□□□□ 0.5
CDC42SE2-209ENST00000506419 RIPOR2Q9Y4F9 1068 aa18.18■□□□□ 0.5
CDC42SE2-209ENST00000506419 MYO3BQ8WXR4 1341 aa18.18■□□□□ 0.5
CDC42SE2-209ENST00000506419 ALDH1L2Q3SY69 923 aa18.17■□□□□ 0.5
CDC42SE2-209ENST00000506419 PITPNM2Q9BZ72 1349 aa18.17■□□□□ 0.5
CDC42SE2-209ENST00000506419 SPEF2Q9C093 1822 aa18.16■□□□□ 0.5
CDC42SE2-209ENST00000506419 SASH1O94885 1247 aa18.16■□□□□ 0.5
CDC42SE2-209ENST00000506419 MOB2Q70IA6 237 aa18.16■□□□□ 0.5
CDC42SE2-209ENST00000506419 PCDHAC2Q9Y5I4 1007 aa18.16■□□□□ 0.5
CDC42SE2-209ENST00000506419 MMP14P50281 582 aa18.15■□□□□ 0.5
CDC42SE2-209ENST00000506419 ZNF157P51786 506 aaPredicted RBP18.15■□□□□ 0.5
CDC42SE2-209ENST00000506419 BRPF1P55201 1214 aaPredicted RBP18.15■□□□□ 0.5
CDC42SE2-209ENST00000506419 NOGQ13253 232 aa18.15■□□□□ 0.5
CDC42SE2-209ENST00000506419 LRRC24Q50LG9 513 aa18.15■□□□□ 0.5
CDC42SE2-209ENST00000506419 FAM84BQ96KN1 310 aaPredicted RBP18.15■□□□□ 0.5
CDC42SE2-209ENST00000506419 BEGAINQ9BUH8 593 aa18.15■□□□□ 0.5
CDC42SE2-209ENST00000506419 JAG2Q9Y219 1238 aa18.15■□□□□ 0.5
CDC42SE2-209ENST00000506419 KIF23Q02241 960 aaPredicted RBP18.14■□□□□ 0.49
CDC42SE2-209ENST00000506419 UBE4AQ14139 1066 aa18.14■□□□□ 0.49
CDC42SE2-209ENST00000506419 ZNF804AQ7Z570 1209 aa18.14■□□□□ 0.49
CDC42SE2-209ENST00000506419 KLHDC4Q8TBB5 520 aa18.14■□□□□ 0.49
CDC42SE2-209ENST00000506419 CCDC102AQ96A19 550 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms