RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 BIRC3Q13489 604 aa10.42□□□□□ -0.74
HTT-203ENST00000506137 MRPL58Q14197 206 aaKnown RBP10.42□□□□□ -0.74
HTT-203ENST00000506137 SMC1AQ14683 1233 aaKnown RBP10.42□□□□□ -0.74
HTT-203ENST00000506137 ACBD5Q5T8D3 534 aaPredicted RBP10.42□□□□□ -0.74
HTT-203ENST00000506137 SKAP1Q86WV1 359 aa10.42□□□□□ -0.74
HTT-203ENST00000506137 CCDC144CPQ8IYA2 1237 aa10.42□□□□□ -0.74
HTT-203ENST00000506137 PPHLN1Q8NEY8 458 aaKnown RBP10.42□□□□□ -0.74
HTT-203ENST00000506137 SPAG5Q96R06 1193 aa10.42□□□□□ -0.74
HTT-203ENST00000506137 PNNQ9H307 717 aaKnown RBP10.42□□□□□ -0.74
HTT-203ENST00000506137 RWDD1Q9H446 243 aaPredicted RBP10.42□□□□□ -0.74
HTT-203ENST00000506137 KMT5AQ9NQR1 393 aa10.42□□□□□ -0.74
HTT-203ENST00000506137 METTL5Q9NRN9 209 aaKnown RBP10.42□□□□□ -0.74
HTT-203ENST00000506137 IP6K2Q9UHH9 426 aa10.42□□□□□ -0.74
HTT-203ENST00000506137 GTF2A1LQ9UNN4 478 aa10.42□□□□□ -0.74
HTT-203ENST00000506137 RABL2BQ9UNT1 228 aa10.42□□□□□ -0.74
HTT-203ENST00000506137 MRPS23Q9Y3D9 190 aaKnown RBP10.42□□□□□ -0.74
HTT-203ENST00000506137 DIP2CQ9Y2E4 1556 aa10.41□□□□□ -0.74
HTT-203ENST00000506137 SHTN1A0MZ66 631 aa10.41□□□□□ -0.74
HTT-203ENST00000506137 PALM3A6NDB9 673 aaPredicted RBP10.41□□□□□ -0.74
HTT-203ENST00000506137 IDEP14735 1019 aa10.41□□□□□ -0.74
HTT-203ENST00000506137 VCAM1P19320 739 aa10.41□□□□□ -0.74
HTT-203ENST00000506137 DNAJA1P31689 397 aaKnown RBP10.41□□□□□ -0.74
HTT-203ENST00000506137 DDIT3P35638 169 aa10.41□□□□□ -0.74
HTT-203ENST00000506137 GEMIN4P57678 1058 aaKnown RBP10.41□□□□□ -0.74
HTT-203ENST00000506137 ARID5AQ03989 594 aa10.41□□□□□ -0.74
HTT-203ENST00000506137 LRCH2Q5VUJ6 765 aa10.41□□□□□ -0.74
HTT-203ENST00000506137 WAPLQ7Z5K2 1190 aa10.41□□□□□ -0.74
HTT-203ENST00000506137 TDRD7Q8NHU6 1098 aaKnown RBP10.41□□□□□ -0.74
HTT-203ENST00000506137 ZFPM2Q8WW38 1151 aa10.41□□□□□ -0.74
HTT-203ENST00000506137 HOMER2Q9NSB8 354 aa10.41□□□□□ -0.74
HTT-203ENST00000506137 SEL1LQ9UBV2 794 aa10.41□□□□□ -0.74
HTT-203ENST00000506137 INTUQ9ULD6 942 aa10.41□□□□□ -0.74
HTT-203ENST00000506137 SCAF11Q99590 1463 aaKnown RBP10.41□□□□□ -0.74
HTT-203ENST00000506137 RTEL1-TNFRSF6BF6WH68 1400 aa10.41□□□□□ -0.74
HTT-203ENST00000506137 SCAPERQ9BY12 1400 aa10.41□□□□□ -0.74
HTT-203ENST00000506137 PIK3R4Q99570 1358 aa10.4□□□□□ -0.74
HTT-203ENST00000506137 PPFIA2O75334 1257 aa10.4□□□□□ -0.74
HTT-203ENST00000506137 SKILP12757 684 aa10.4□□□□□ -0.74
HTT-203ENST00000506137 COX10Q12887 443 aa10.4□□□□□ -0.74
HTT-203ENST00000506137 MORC3Q14149 939 aa10.4□□□□□ -0.74
HTT-203ENST00000506137 CT47A1Q5JQC4 288 aaPredicted RBP10.4□□□□□ -0.74
HTT-203ENST00000506137 JAKMIP3Q5VZ66 844 aa10.4□□□□□ -0.74
HTT-203ENST00000506137 METTL16Q86W50 562 aaKnown RBP10.4□□□□□ -0.74
HTT-203ENST00000506137 PLPP6Q8IY26 295 aa10.4□□□□□ -0.74
HTT-203ENST00000506137 MYOCDQ8IZQ8 938 aa10.4□□□□□ -0.74
HTT-203ENST00000506137 STAG2Q8N3U4 1231 aa10.4□□□□□ -0.74
HTT-203ENST00000506137 JARID2Q92833 1246 aaPredicted RBP10.4□□□□□ -0.74
HTT-203ENST00000506137 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.4□□□□□ -0.74
HTT-203ENST00000506137 RMI1Q9H9A7 625 aa10.4□□□□□ -0.74
HTT-203ENST00000506137 DIAPH3Q9NSV4 1193 aa10.4□□□□□ -0.74
HTT-203ENST00000506137 EPS15L1Q9UBC2 864 aa10.4□□□□□ -0.74
HTT-203ENST00000506137 KIF14Q15058 1648 aa10.4□□□□□ -0.75
HTT-203ENST00000506137 KAT6BQ8WYB5 2073 aa10.39□□□□□ -0.75
HTT-203ENST00000506137 NR1I2O75469 434 aa10.39□□□□□ -0.75
HTT-203ENST00000506137 HSPA6P17066 643 aa10.39□□□□□ -0.75
HTT-203ENST00000506137 SFSWAPQ12872 951 aaKnown RBP10.39□□□□□ -0.75
HTT-203ENST00000506137 ELOAQ14241 798 aaKnown RBP10.39□□□□□ -0.75
HTT-203ENST00000506137 WDR45BQ5MNZ6 344 aa10.39□□□□□ -0.75
HTT-203ENST00000506137 C10orf62Q5T681 223 aaPredicted RBP10.39□□□□□ -0.75
HTT-203ENST00000506137 APPL2Q8NEU8 664 aa10.39□□□□□ -0.75
HTT-203ENST00000506137 TBC1D31Q96DN5 1066 aa10.39□□□□□ -0.75
HTT-203ENST00000506137 GBP4Q96PP9 640 aa10.39□□□□□ -0.75
HTT-203ENST00000506137 SERINC2Q96SA4 455 aa10.39□□□□□ -0.75
HTT-203ENST00000506137 FAM167BQ9BTA0 163 aa10.39□□□□□ -0.75
HTT-203ENST00000506137 SELENOOQ9BVL4 669 aa10.39□□□□□ -0.75
HTT-203ENST00000506137 CSRNP2Q9H175 543 aa10.39□□□□□ -0.75
HTT-203ENST00000506137 DEF6Q9H4E7 631 aa10.39□□□□□ -0.75
HTT-203ENST00000506137 RIC8AQ9NPQ8 531 aa10.39□□□□□ -0.75
HTT-203ENST00000506137 TRPV5Q9NQA5 729 aa10.39□□□□□ -0.75
HTT-203ENST00000506137 DDX49Q9Y6V7 483 aaKnown RBP10.39□□□□□ -0.75
HTT-203ENST00000506137 HOXD10P28358 340 aa10.38□□□□□ -0.75
HTT-203ENST00000506137 RFC5P40937 340 aa10.38□□□□□ -0.75
HTT-203ENST00000506137 EXOSC10Q01780 885 aaKnown RBP10.38□□□□□ -0.75
HTT-203ENST00000506137 SLMAPQ14BN4 828 aa10.38□□□□□ -0.75
HTT-203ENST00000506137 WASHC4Q2M389 1173 aa10.38□□□□□ -0.75
HTT-203ENST00000506137 CHADLQ6NUI6 762 aa10.38□□□□□ -0.75
HTT-203ENST00000506137 CPXCR1Q8N123 301 aa10.38□□□□□ -0.75
HTT-203ENST00000506137 MAML1Q92585 1016 aa10.38□□□□□ -0.75
HTT-203ENST00000506137 SKA1Q96BD8 255 aa10.38□□□□□ -0.75
HTT-203ENST00000506137 BBOX1O75936 387 aa10.37□□□□□ -0.75
HTT-203ENST00000506137 LMNB1P20700 586 aa10.37□□□□□ -0.75
HTT-203ENST00000506137 HOXC13P31276 330 aa10.37□□□□□ -0.75
HTT-203ENST00000506137 TAGLNQ01995 201 aaKnown RBP10.37□□□□□ -0.75
HTT-203ENST00000506137 MUM1Q2TAK8 710 aa10.37□□□□□ -0.75
HTT-203ENST00000506137 SPECC1Q5M775 1068 aa10.37□□□□□ -0.75
HTT-203ENST00000506137 PHLDB3Q6NSJ2 640 aa10.37□□□□□ -0.75
HTT-203ENST00000506137 IFNL2Q8IZJ0 200 aa10.37□□□□□ -0.75
HTT-203ENST00000506137 TMEM87BQ96K49 555 aa10.37□□□□□ -0.75
HTT-203ENST00000506137 GSDMAQ96QA5 445 aa10.37□□□□□ -0.75
HTT-203ENST00000506137 KIF2CQ99661 725 aa10.37□□□□□ -0.75
HTT-203ENST00000506137 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.37□□□□□ -0.75
HTT-203ENST00000506137 DNAJC25Q9H1X3 360 aa10.37□□□□□ -0.75
HTT-203ENST00000506137 PPCSQ9HAB8 311 aa10.37□□□□□ -0.75
HTT-203ENST00000506137 ENAMQ9NRM1 1142 aa10.37□□□□□ -0.75
HTT-203ENST00000506137 C6orf203Q9P0P8 240 aaPredicted RBP10.37□□□□□ -0.75
HTT-203ENST00000506137 DKK3Q9UBP4 350 aa10.37□□□□□ -0.75
HTT-203ENST00000506137 GJA3Q9Y6H8 435 aa10.37□□□□□ -0.75
HTT-203ENST00000506137 OAS2P29728 719 aaKnown RBP10.36□□□□□ -0.75
HTT-203ENST00000506137 CLCN1P35523 988 aa10.36□□□□□ -0.75
HTT-203ENST00000506137 EAPPQ56P03 285 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 163.8 ms