RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 ZC3H15Q8WU90 426 aaKnown RBP9.51□□□□□ -0.89
VCAN-206ENST00000505615 FMNL2Q96PY5 1086 aa9.51□□□□□ -0.89
VCAN-206ENST00000505615 PRKD2Q9BZL6 878 aa9.51□□□□□ -0.89
VCAN-206ENST00000505615 NIP7Q9Y221 180 aaKnown RBP eCLIP9.51□□□□□ -0.89
VCAN-206ENST00000505615 CDHR2Q9BYE9 1310 aa9.51□□□□□ -0.89
VCAN-206ENST00000505615 A0A0C4DFX4 3053 aa9.5□□□□□ -0.89
VCAN-206ENST00000505615 LAMB4A4D0S4 1761 aa9.5□□□□□ -0.89
VCAN-206ENST00000505615 RBBP6Q7Z6E9 1792 aaKnown RBP9.5□□□□□ -0.89
VCAN-206ENST00000505615 SHTN1A0MZ66 631 aa9.5□□□□□ -0.89
VCAN-206ENST00000505615 PRAMEF22A3QJZ6 481 aa9.5□□□□□ -0.89
VCAN-206ENST00000505615 FAM177BA6PVY3 158 aa9.5□□□□□ -0.89
VCAN-206ENST00000505615 HOXA10P31260 410 aaPredicted RBP9.5□□□□□ -0.89
VCAN-206ENST00000505615 FXR1P51114 621 aaKnown RBP eCLIP9.5□□□□□ -0.89
VCAN-206ENST00000505615 CXCL9Q07325 125 aa9.5□□□□□ -0.89
VCAN-206ENST00000505615 AOC3Q16853 763 aa9.5□□□□□ -0.89
VCAN-206ENST00000505615 RGMBQ6NW40 437 aa9.5□□□□□ -0.89
VCAN-206ENST00000505615 PPP1R18Q6NYC8 613 aa9.5□□□□□ -0.89
VCAN-206ENST00000505615 TRAF7Q6Q0C0 670 aa9.5□□□□□ -0.89
VCAN-206ENST00000505615 CDC37L1Q7L3B6 337 aa9.5□□□□□ -0.89
VCAN-206ENST00000505615 CDHR5Q9HBB8 845 aa9.5□□□□□ -0.89
VCAN-206ENST00000505615 PNMA3Q9UL41 463 aa9.5□□□□□ -0.89
VCAN-206ENST00000505615 ZNF652Q9Y2D9 606 aa9.5□□□□□ -0.89
VCAN-206ENST00000505615 USP16Q9Y5T5 823 aa9.5□□□□□ -0.89
VCAN-206ENST00000505615 V9GY48 417 aaPredicted RBP9.5□□□□□ -0.89
VCAN-206ENST00000505615 KIF7Q2M1P5 1343 aa9.5□□□□□ -0.89
VCAN-206ENST00000505615 LAMB2P55268 1798 aa9.5□□□□□ -0.89
VCAN-206ENST00000505615 CEMIPQ8WUJ3 1361 aa9.5□□□□□ -0.89
VCAN-206ENST00000505615 NRG2O14511 850 aaPredicted RBP9.49□□□□□ -0.89
VCAN-206ENST00000505615 PPIP5K2O43314 1243 aa9.49□□□□□ -0.89
VCAN-206ENST00000505615 E2F4Q16254 413 aa9.49□□□□□ -0.89
VCAN-206ENST00000505615 GRIPAP1Q4V328 841 aa9.49□□□□□ -0.89
VCAN-206ENST00000505615 NPM2Q86SE8 214 aaKnown RBP9.49□□□□□ -0.89
VCAN-206ENST00000505615 MORC1Q86VD1 984 aa9.49□□□□□ -0.89
VCAN-206ENST00000505615 SLC10A3P09131 477 aa9.48□□□□□ -0.89
VCAN-206ENST00000505615 OSBPP22059 807 aa9.48□□□□□ -0.89
VCAN-206ENST00000505615 TEFQ10587 303 aa9.48□□□□□ -0.89
VCAN-206ENST00000505615 HLFQ16534 295 aa9.48□□□□□ -0.89
VCAN-206ENST00000505615 NBPF10Q6P3W6 841 aaKnown RBP9.48□□□□□ -0.89
VCAN-206ENST00000505615 USP48Q86UV5 1035 aa9.48□□□□□ -0.89
VCAN-206ENST00000505615 NUTM1Q86Y26 1132 aa9.48□□□□□ -0.89
VCAN-206ENST00000505615 TTC13Q8NBP0 860 aa9.48□□□□□ -0.89
VCAN-206ENST00000505615 CSRNP1Q96S65 589 aa9.48□□□□□ -0.89
VCAN-206ENST00000505615 PANK3Q9H999 370 aa9.48□□□□□ -0.89
VCAN-206ENST00000505615 GBA2Q9HCG7 927 aaPredicted RBP9.48□□□□□ -0.89
VCAN-206ENST00000505615 DUOX1Q9NRD9 1551 aa9.48□□□□□ -0.89
VCAN-206ENST00000505615 TAF1P21675 1872 aa9.48□□□□□ -0.89
VCAN-206ENST00000505615 PAPPA2Q9BXP8 1791 aa9.47□□□□□ -0.89
VCAN-206ENST00000505615 RANBP2P49792 3224 aaKnown RBP9.47□□□□□ -0.89
VCAN-206ENST00000505615 PPEF1O14829 653 aaPredicted RBP9.47□□□□□ -0.89
VCAN-206ENST00000505615 ZNF516Q92618 1163 aa9.47□□□□□ -0.89
VCAN-206ENST00000505615 CCDC102AQ96A19 550 aa9.47□□□□□ -0.89
VCAN-206ENST00000505615 CRAMP1Q96RY5 1269 aa9.47□□□□□ -0.89
VCAN-206ENST00000505615 RTFDC1Q9BY42 306 aaPredicted RBP9.47□□□□□ -0.89
VCAN-206ENST00000505615 ZNRF3Q9ULT6 936 aa9.47□□□□□ -0.89
VCAN-206ENST00000505615 IBTKQ9P2D0 1353 aaPredicted RBP9.47□□□□□ -0.89
VCAN-206ENST00000505615 COL3A1P02461 1466 aaPredicted RBP9.47□□□□□ -0.89
VCAN-206ENST00000505615 LRRC37AA6NMS7 1700 aa9.46□□□□□ -0.89
VCAN-206ENST00000505615 ANKRD36CQ5JPF3 1778 aa9.46□□□□□ -0.9
VCAN-206ENST00000505615 TULP1O00294 542 aaPredicted RBP9.46□□□□□ -0.9
VCAN-206ENST00000505615 ZNF157P51786 506 aaPredicted RBP9.46□□□□□ -0.9
VCAN-206ENST00000505615 PKN2Q16513 984 aaKnown RBP9.46□□□□□ -0.9
VCAN-206ENST00000505615 NUDT18Q6ZVK8 323 aa9.46□□□□□ -0.9
VCAN-206ENST00000505615 POLR3GLQ9BT43 218 aa9.46□□□□□ -0.9
VCAN-206ENST00000505615 VPS33BQ9H267 617 aa9.46□□□□□ -0.9
VCAN-206ENST00000505615 SCN9AQ15858 1988 aa9.46□□□□□ -0.9
VCAN-206ENST00000505615 GRXCR2A6NFK2 248 aa9.45□□□□□ -0.9
VCAN-206ENST00000505615 YDJCA8MPS7 323 aa9.45□□□□□ -0.9
VCAN-206ENST00000505615 GNAT3A8MTJ3 354 aa9.45□□□□□ -0.9
VCAN-206ENST00000505615 ADM5C9JUS6 153 aa9.45□□□□□ -0.9
VCAN-206ENST00000505615 TCERG1O14776 1098 aaKnown RBP9.45□□□□□ -0.9
VCAN-206ENST00000505615 RAD17O75943 681 aa9.45□□□□□ -0.9
VCAN-206ENST00000505615 EGFRP00533 1210 aa9.45□□□□□ -0.9
VCAN-206ENST00000505615 KRT26Q7Z3Y9 468 aa9.45□□□□□ -0.9
VCAN-206ENST00000505615 RASAL3Q86YV0 1011 aa9.45□□□□□ -0.9
VCAN-206ENST00000505615 ZNF296Q8WUU4 475 aaPredicted RBP9.45□□□□□ -0.9
VCAN-206ENST00000505615 RPGRQ92834 1020 aaKnown RBP9.45□□□□□ -0.9
VCAN-206ENST00000505615 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.45□□□□□ -0.9
VCAN-206ENST00000505615 CNOT7Q9UIV1 285 aaKnown RBP9.45□□□□□ -0.9
VCAN-206ENST00000505615 UBN2Q6ZU65 1347 aa9.45□□□□□ -0.9
VCAN-206ENST00000505615 COL6A3P12111 3177 aa9.45□□□□□ -0.9
VCAN-206ENST00000505615 GTF2E1P29083 439 aaPredicted RBP9.44□□□□□ -0.9
VCAN-206ENST00000505615 KIAA2012Q0VF49 1180 aa9.44□□□□□ -0.9
VCAN-206ENST00000505615 FBXO46Q6PJ61 603 aaPredicted RBP9.44□□□□□ -0.9
VCAN-206ENST00000505615 ERICH6Q7L0X2 663 aa9.44□□□□□ -0.9
VCAN-206ENST00000505615 C2orf69Q8N8R5 385 aa9.44□□□□□ -0.9
VCAN-206ENST00000505615 RBM17Q96I25 401 aaKnown RBP9.44□□□□□ -0.9
VCAN-206ENST00000505615 BCL2L13Q9BXK5 485 aa9.44□□□□□ -0.9
VCAN-206ENST00000505615 NYXQ9GZU5 481 aa9.44□□□□□ -0.9
VCAN-206ENST00000505615 ATP6V0A2Q9Y487 856 aa9.44□□□□□ -0.9
VCAN-206ENST00000505615 DDX60Q8IY21 1712 aaKnown RBP9.44□□□□□ -0.9
VCAN-206ENST00000505615 BTBD11A6QL63 1104 aa9.43□□□□□ -0.9
VCAN-206ENST00000505615 NTSR2O95665 410 aa9.43□□□□□ -0.9
VCAN-206ENST00000505615 SNRPA1P09661 255 aaKnown RBP9.43□□□□□ -0.9
VCAN-206ENST00000505615 TNIP1Q15025 636 aa9.43□□□□□ -0.9
VCAN-206ENST00000505615 GAS2L2Q8NHY3 880 aa9.43□□□□□ -0.9
VCAN-206ENST00000505615 PSME4Q14997 1843 aa9.42□□□□□ -0.9
VCAN-206ENST00000505615 ABCC4O15439 1325 aa9.42□□□□□ -0.9
VCAN-206ENST00000505615 H7C1D1 291 aa9.42□□□□□ -0.9
VCAN-206ENST00000505615 TBC1D10BQ4KMP7 808 aaPredicted RBP9.42□□□□□ -0.9
VCAN-206ENST00000505615 NOM1Q5C9Z4 860 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms