RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 CTNNA3Q9UI47 895 aa18.33■□□□□ 0.53
SNCAIP-207ENST00000504884 ZNF652Q9Y2D9 606 aa18.33■□□□□ 0.53
SNCAIP-207ENST00000504884 RREB1Q92766 1687 aa18.33■□□□□ 0.52
SNCAIP-207ENST00000504884 M0R2C6 588 aa18.33■□□□□ 0.52
SNCAIP-207ENST00000504884 PUM3Q15397 648 aaKnown RBP18.33■□□□□ 0.52
SNCAIP-207ENST00000504884 CLEC4GQ6UXB4 293 aa18.33■□□□□ 0.52
SNCAIP-207ENST00000504884 LPIN2Q92539 896 aa18.33■□□□□ 0.52
SNCAIP-207ENST00000504884 C8orf37Q96NL8 207 aa18.33■□□□□ 0.52
SNCAIP-207ENST00000504884 MTMR6Q9Y217 621 aa18.33■□□□□ 0.52
SNCAIP-207ENST00000504884 NIP7Q9Y221 180 aaKnown RBP eCLIP18.33■□□□□ 0.52
SNCAIP-207ENST00000504884 UQCRFS1P1P0C7P4 283 aa18.32■□□□□ 0.52
SNCAIP-207ENST00000504884 MCAMP43121 646 aa18.32■□□□□ 0.52
SNCAIP-207ENST00000504884 CCDC152Q4G0S7 254 aa18.32■□□□□ 0.52
SNCAIP-207ENST00000504884 LARP1BQ659C4 914 aaKnown RBP18.32■□□□□ 0.52
SNCAIP-207ENST00000504884 Q6ZUG5 572 aa18.32■□□□□ 0.52
SNCAIP-207ENST00000504884 USP48Q86UV5 1035 aa18.32■□□□□ 0.52
SNCAIP-207ENST00000504884 TMEM87AQ8NBN3 555 aa18.32■□□□□ 0.52
SNCAIP-207ENST00000504884 MPHOSPH8Q99549 860 aa18.31■□□□□ 0.52
SNCAIP-207ENST00000504884 FAM177BA6PVY3 158 aa18.31■□□□□ 0.52
SNCAIP-207ENST00000504884 FGFR2P21802 821 aa18.31■□□□□ 0.52
SNCAIP-207ENST00000504884 FOXD4L6Q3SYB3 417 aaPredicted RBP18.31■□□□□ 0.52
SNCAIP-207ENST00000504884 FOXD4L3Q6VB84 417 aaPredicted RBP18.31■□□□□ 0.52
SNCAIP-207ENST00000504884 STOX1Q6ZVD7 989 aa18.31■□□□□ 0.52
SNCAIP-207ENST00000504884 FNBP4Q8N3X1 1017 aaPredicted RBP18.31■□□□□ 0.52
SNCAIP-207ENST00000504884 BCL9LQ86UU0 1499 aa18.3■□□□□ 0.52
SNCAIP-207ENST00000504884 E7EWF7 191 aa18.3■□□□□ 0.52
SNCAIP-207ENST00000504884 NTSR2O95665 410 aa18.3■□□□□ 0.52
SNCAIP-207ENST00000504884 ARID4AP29374 1257 aaPredicted RBP18.3■□□□□ 0.52
SNCAIP-207ENST00000504884 FGD1P98174 961 aa18.3■□□□□ 0.52
SNCAIP-207ENST00000504884 CCDC102BQ68D86 513 aa18.3■□□□□ 0.52
SNCAIP-207ENST00000504884 MYH14Q7Z406 1995 aaKnown RBP18.3■□□□□ 0.52
SNCAIP-207ENST00000504884 RTL9Q8NET4 1388 aa18.29■□□□□ 0.52
SNCAIP-207ENST00000504884 SLC5A1P13866 664 aa18.29■□□□□ 0.52
SNCAIP-207ENST00000504884 EXOSC10Q01780 885 aaKnown RBP18.29■□□□□ 0.52
SNCAIP-207ENST00000504884 CSPP1Q1MSJ5 1256 aa18.29■□□□□ 0.52
SNCAIP-207ENST00000504884 GTF3C6Q969F1 213 aa18.29■□□□□ 0.52
SNCAIP-207ENST00000504884 SYAP1Q96A49 352 aaPredicted RBP18.29■□□□□ 0.52
SNCAIP-207ENST00000504884 PANK2Q9BZ23 570 aa18.29■□□□□ 0.52
SNCAIP-207ENST00000504884 RGL2O15211 777 aa18.29■□□□□ 0.52
SNCAIP-207ENST00000504884 STK3Q13188 491 aa18.29■□□□□ 0.52
SNCAIP-207ENST00000504884 PI16Q6UXB8 463 aa18.29■□□□□ 0.52
SNCAIP-207ENST00000504884 AGXT2Q9BYV1 514 aa18.29■□□□□ 0.52
SNCAIP-207ENST00000504884 TMEM63CQ9P1W3 806 aa18.29■□□□□ 0.52
SNCAIP-207ENST00000504884 NSFL1CQ9UNZ2 370 aaKnown RBP18.29■□□□□ 0.52
SNCAIP-207ENST00000504884 ADD2P35612 726 aa18.28■□□□□ 0.52
SNCAIP-207ENST00000504884 IGHMBP2P38935 993 aaKnown RBP18.28■□□□□ 0.52
SNCAIP-207ENST00000504884 IMMTQ16891 758 aaKnown RBP18.28■□□□□ 0.52
SNCAIP-207ENST00000504884 HELBQ8NG08 1087 aaPredicted RBP18.28■□□□□ 0.52
SNCAIP-207ENST00000504884 BRF1Q92994 677 aa18.28■□□□□ 0.52
SNCAIP-207ENST00000504884 PUS7LQ9H0K6 701 aaKnown RBP18.28■□□□□ 0.52
SNCAIP-207ENST00000504884 GDPD2Q9HCC8 539 aa18.28■□□□□ 0.52
SNCAIP-207ENST00000504884 RBM27Q9P2N5 1060 aaKnown RBP18.28■□□□□ 0.52
SNCAIP-207ENST00000504884 ZNF831Q5JPB2 1677 aa18.28■□□□□ 0.52
SNCAIP-207ENST00000504884 VPS37CA5D8V6 355 aaPredicted RBP18.27■□□□□ 0.52
SNCAIP-207ENST00000504884 PHKA1P46020 1223 aa18.27■□□□□ 0.52
SNCAIP-207ENST00000504884 UBE3CQ15386 1083 aa18.27■□□□□ 0.52
SNCAIP-207ENST00000504884 LINC00116Q8NCU8 138 aa18.27■□□□□ 0.52
SNCAIP-207ENST00000504884 CHMP4CQ96CF2 233 aa18.27■□□□□ 0.52
SNCAIP-207ENST00000504884 SEC31BQ9NQW1 1179 aa18.27■□□□□ 0.52
SNCAIP-207ENST00000504884 CNPY2Q9Y2B0 182 aa18.27■□□□□ 0.52
SNCAIP-207ENST00000504884 FGAP02671 866 aa18.26■□□□□ 0.51
SNCAIP-207ENST00000504884 SLC9C2Q5TAH2 1124 aa18.26■□□□□ 0.51
SNCAIP-207ENST00000504884 FBXL16Q8N461 479 aa18.26■□□□□ 0.51
SNCAIP-207ENST00000504884 LLPHQ9BRT6 129 aaKnown RBP18.26■□□□□ 0.51
SNCAIP-207ENST00000504884 LRP5O75197 1615 aa18.26■□□□□ 0.51
SNCAIP-207ENST00000504884 AKAP11Q9UKA4 1901 aa18.26■□□□□ 0.51
SNCAIP-207ENST00000504884 GPAA1O43292 621 aa18.26■□□□□ 0.51
SNCAIP-207ENST00000504884 PFKFB2O60825 505 aa18.26■□□□□ 0.51
SNCAIP-207ENST00000504884 GADD45BO75293 160 aaPredicted RBP18.26■□□□□ 0.51
SNCAIP-207ENST00000504884 CNTNAP4Q9C0A0 1308 aa18.26■□□□□ 0.51
SNCAIP-207ENST00000504884 UBE2HP62256 183 aa18.25■□□□□ 0.51
SNCAIP-207ENST00000504884 RC3H1Q5TC82 1133 aaKnown RBP18.25■□□□□ 0.51
SNCAIP-207ENST00000504884 TTLL5Q6EMB2 1281 aa18.25■□□□□ 0.51
SNCAIP-207ENST00000504884 LRSAM1Q6UWE0 723 aa18.25■□□□□ 0.51
SNCAIP-207ENST00000504884 LRRC2Q9BYS8 371 aa18.25■□□□□ 0.51
SNCAIP-207ENST00000504884 TCHHQ07283 1943 aa18.25■□□□□ 0.51
SNCAIP-207ENST00000504884 COL5A3P25940 1745 aaPredicted RBP18.24■□□□□ 0.51
SNCAIP-207ENST00000504884 FOXP2O15409 715 aa18.24■□□□□ 0.51
SNCAIP-207ENST00000504884 DTNBO60941 627 aa18.24■□□□□ 0.51
SNCAIP-207ENST00000504884 PIH1D3Q9NQM4 214 aaKnown RBP18.24■□□□□ 0.51
SNCAIP-207ENST00000504884 USP21Q9UK80 565 aa18.24■□□□□ 0.51
SNCAIP-207ENST00000504884 SPATA31A6Q5VVP1 1343 aa18.24■□□□□ 0.51
SNCAIP-207ENST00000504884 A0A0G2JLW4 131 aa18.24■□□□□ 0.51
SNCAIP-207ENST00000504884 ZNF213O14771 459 aa18.24■□□□□ 0.51
SNCAIP-207ENST00000504884 IDH1O75874 414 aaKnown RBP18.24■□□□□ 0.51
SNCAIP-207ENST00000504884 DNM1Q05193 864 aaKnown RBP18.24■□□□□ 0.51
SNCAIP-207ENST00000504884 SPATA5Q8NB90 893 aa18.24■□□□□ 0.51
SNCAIP-207ENST00000504884 ZNF274Q96GC6 653 aaPredicted RBP18.24■□□□□ 0.51
SNCAIP-207ENST00000504884 CDC5LQ99459 802 aaKnown RBP18.24■□□□□ 0.51
SNCAIP-207ENST00000504884 PHF14O94880 888 aa18.23■□□□□ 0.51
SNCAIP-207ENST00000504884 NASPP49321 788 aaPredicted RBP18.23■□□□□ 0.51
SNCAIP-207ENST00000504884 SCRN1Q12765 414 aa18.23■□□□□ 0.51
SNCAIP-207ENST00000504884 SF3B3Q15393 1217 aaKnown RBP18.22■□□□□ 0.51
SNCAIP-207ENST00000504884 CDC37L1Q7L3B6 337 aa18.22■□□□□ 0.51
SNCAIP-207ENST00000504884 SMARCC2Q8TAQ2 1214 aa18.22■□□□□ 0.51
SNCAIP-207ENST00000504884 ANP32BQ92688 251 aaKnown RBP18.22■□□□□ 0.51
SNCAIP-207ENST00000504884 LAMA4Q16363 1823 aa18.22■□□□□ 0.51
SNCAIP-207ENST00000504884 MYH7P12883 1935 aa18.22■□□□□ 0.51
SNCAIP-207ENST00000504884 ATRNO75882 1429 aa18.22■□□□□ 0.51
SNCAIP-207ENST00000504884 DDX60Q8IY21 1712 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms