RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNBP-208	ENST00000504813	RABL6	Q3YEC7	729 aa	Predicted RBP	18.54	■□□□□ 0.56
CNBP-208	ENST00000504813	USP44	Q9H0E7	712 aa		18.54	■□□□□ 0.56
CNBP-208	ENST00000504813	BICC1	Q9H694	974 aa	Known RBP	18.54	■□□□□ 0.56
CNBP-208	ENST00000504813	CNTNAP1	P78357	1384 aa		18.53	■□□□□ 0.56
CNBP-208	ENST00000504813	USP17L3	A6NCW0	530 aa		18.53	■□□□□ 0.56
CNBP-208	ENST00000504813	USP17L4	A6NCW7	530 aa		18.53	■□□□□ 0.56
CNBP-208	ENST00000504813	TRAF5	O00463	557 aa		18.53	■□□□□ 0.56
CNBP-208	ENST00000504813	TAF5L	O75529	589 aa		18.53	■□□□□ 0.56
CNBP-208	ENST00000504813	RARS	P54136	660 aa	Known RBP	18.53	■□□□□ 0.56
CNBP-208	ENST00000504813	LDHAL6A	Q6ZMR3	332 aa		18.53	■□□□□ 0.56
CNBP-208	ENST00000504813	USP17L1	Q7RTZ2	530 aa		18.53	■□□□□ 0.56
CNBP-208	ENST00000504813	AGBL3	Q8NEM8	1001 aa		18.53	■□□□□ 0.56
CNBP-208	ENST00000504813	HELB	Q8NG08	1087 aa	Predicted RBP	18.53	■□□□□ 0.56
CNBP-208	ENST00000504813	GML	Q99445	158 aa		18.53	■□□□□ 0.56
CNBP-208	ENST00000504813	COA1	Q9GZY4	146 aa		18.53	■□□□□ 0.56
CNBP-208	ENST00000504813	MKRN1	Q9UHC7	482 aa	Known RBP	18.53	■□□□□ 0.56
CNBP-208	ENST00000504813	NOB1	Q9ULX3	412 aa	Known RBP	18.53	■□□□□ 0.56
CNBP-208	ENST00000504813	SNAP23	O00161	211 aa		18.52	■□□□□ 0.56
CNBP-208	ENST00000504813	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	18.52	■□□□□ 0.56
CNBP-208	ENST00000504813	TAF7L	Q5H9L4	462 aa		18.52	■□□□□ 0.56
CNBP-208	ENST00000504813	CST9	Q5W186	159 aa		18.51	■□□□□ 0.55
CNBP-208	ENST00000504813	C15orf52	Q6ZUT6	534 aa	Known RBP	18.51	■□□□□ 0.55
CNBP-208	ENST00000504813	ANKRD44	Q8N8A2	993 aa		18.51	■□□□□ 0.55
CNBP-208	ENST00000504813	GLIS2	Q9BZE0	524 aa	Predicted RBP	18.51	■□□□□ 0.55
CNBP-208	ENST00000504813	KCNJ4	P48050	445 aa		18.5	■□□□□ 0.55
CNBP-208	ENST00000504813	ZNF280A	P59817	542 aa	Predicted RBP	18.5	■□□□□ 0.55
CNBP-208	ENST00000504813	DACT2	Q5SW24	774 aa		18.5	■□□□□ 0.55
CNBP-208	ENST00000504813	CNNM1	Q9NRU3	951 aa		18.5	■□□□□ 0.55
CNBP-208	ENST00000504813	KIF4B	Q2VIQ3	1234 aa		18.49	■□□□□ 0.55
CNBP-208	ENST00000504813	RBM26	Q5T8P6	1007 aa	Known RBP	18.49	■□□□□ 0.55
CNBP-208	ENST00000504813	STRIP1	Q5VSL9	837 aa		18.49	■□□□□ 0.55
CNBP-208	ENST00000504813	CDC37L1	Q7L3B6	337 aa		18.49	■□□□□ 0.55
CNBP-208	ENST00000504813	RASSF10	A6NK89	507 aa		18.49	■□□□□ 0.55
CNBP-208	ENST00000504813	PUS3	Q9BZE2	481 aa	Known RBP	18.49	■□□□□ 0.55
CNBP-208	ENST00000504813	USP17L8	P0C7I0	530 aa		18.48	■□□□□ 0.55
CNBP-208	ENST00000504813	MXD3	Q9BW11	206 aa		18.48	■□□□□ 0.55
CNBP-208	ENST00000504813	API5	Q9BZZ5	524 aa	Known RBP	18.48	■□□□□ 0.55
CNBP-208	ENST00000504813	CD209	Q9NNX6	404 aa		18.48	■□□□□ 0.55
CNBP-208	ENST00000504813	RIPOR2	Q9Y4F9	1068 aa		18.48	■□□□□ 0.55
CNBP-208	ENST00000504813	PLIN1	O60240	522 aa		18.47	■□□□□ 0.55
CNBP-208	ENST00000504813	VEGFB	P49765	207 aa		18.47	■□□□□ 0.55
CNBP-208	ENST00000504813	DEFB115	Q30KQ5	88 aa		18.47	■□□□□ 0.55
CNBP-208	ENST00000504813	TTLL5	Q6EMB2	1281 aa		18.47	■□□□□ 0.55
CNBP-208	ENST00000504813	ARHGAP45	Q92619	1136 aa		18.47	■□□□□ 0.55
CNBP-208	ENST00000504813	MYO3B	Q8WXR4	1341 aa		18.46	■□□□□ 0.55
CNBP-208	ENST00000504813	KIF16B	Q96L93	1317 aa		18.46	■□□□□ 0.55
CNBP-208	ENST00000504813	USP48	Q86UV5	1035 aa		18.46	■□□□□ 0.55
CNBP-208	ENST00000504813	MYOZ2	Q9NPC6	264 aa		18.46	■□□□□ 0.55
CNBP-208	ENST00000504813	ABT1	Q9ULW3	272 aa	Known RBP	18.46	■□□□□ 0.55
CNBP-208	ENST00000504813	ASTN2	O75129	1339 aa	Predicted RBP	18.46	■□□□□ 0.54
CNBP-208	ENST00000504813	CELF2	O95319	508 aa	Known RBP	18.45	■□□□□ 0.54
CNBP-208	ENST00000504813	GTF2I	P78347	998 aa		18.45	■□□□□ 0.54
CNBP-208	ENST00000504813	DLK2	Q6UY11	383 aa		18.45	■□□□□ 0.54
CNBP-208	ENST00000504813	FBXW7	Q969H0	707 aa		18.45	■□□□□ 0.54
CNBP-208	ENST00000504813	TLL2	Q9Y6L7	1015 aa		18.45	■□□□□ 0.54
CNBP-208	ENST00000504813	IL1R1	P14778	569 aa		18.44	■□□□□ 0.54
CNBP-208	ENST00000504813	UBE4A	Q14139	1066 aa		18.44	■□□□□ 0.54
CNBP-208	ENST00000504813	LRRC24	Q50LG9	513 aa		18.44	■□□□□ 0.54
CNBP-208	ENST00000504813	KRT26	Q7Z3Y9	468 aa		18.44	■□□□□ 0.54
CNBP-208	ENST00000504813	DCPS	Q96C86	337 aa	Known RBP	18.44	■□□□□ 0.54
CNBP-208	ENST00000504813	GGA3	Q9NZ52	723 aa		18.44	■□□□□ 0.54
CNBP-208	ENST00000504813	THSD7B	Q9C0I4	1608 aa		18.44	■□□□□ 0.54
CNBP-208	ENST00000504813	MROH5	Q6ZUA9	1318 aa		18.44	■□□□□ 0.54
CNBP-208	ENST00000504813	BCAR3	O75815	825 aa		18.44	■□□□□ 0.54
CNBP-208	ENST00000504813	SCARF1	Q14162	830 aa		18.44	■□□□□ 0.54
CNBP-208	ENST00000504813	ERICH6B	Q5W0A0	696 aa		18.44	■□□□□ 0.54
CNBP-208	ENST00000504813	ZNF804A	Q7Z570	1209 aa		18.44	■□□□□ 0.54
CNBP-208	ENST00000504813	KLHDC4	Q8TBB5	520 aa		18.44	■□□□□ 0.54
CNBP-208	ENST00000504813	ECM29	Q5VYK3	1845 aa		18.43	■□□□□ 0.54
CNBP-208	ENST00000504813	UBTFL1	P0CB47	393 aa	Predicted RBP	18.43	■□□□□ 0.54
CNBP-208	ENST00000504813	HSPA1A	P0DMV8	641 aa	Known RBP	18.43	■□□□□ 0.54
CNBP-208	ENST00000504813	HSPA1B	P0DMV9	641 aa	Known RBP	18.43	■□□□□ 0.54
CNBP-208	ENST00000504813	RFX5	P48382	616 aa	Predicted RBP	18.43	■□□□□ 0.54
CNBP-208	ENST00000504813	RRP1	P56182	461 aa	Known RBP	18.43	■□□□□ 0.54
CNBP-208	ENST00000504813	INTS3	Q68E01	1043 aa	Known RBP	18.43	■□□□□ 0.54
CNBP-208	ENST00000504813	SAPCD2	Q86UD0	394 aa		18.43	■□□□□ 0.54
CNBP-208	ENST00000504813	ARAP2	Q8WZ64	1704 aa		18.42	■□□□□ 0.54
CNBP-208	ENST00000504813	ADM5	C9JUS6	153 aa		18.42	■□□□□ 0.54
CNBP-208	ENST00000504813	MMP14	P50281	582 aa		18.42	■□□□□ 0.54
CNBP-208	ENST00000504813	IRX6	P78412	446 aa	Predicted RBP	18.42	■□□□□ 0.54
CNBP-208	ENST00000504813	OGFOD1	Q8N543	542 aa		18.42	■□□□□ 0.54
CNBP-208	ENST00000504813	VGLL2	Q8N8G2	317 aa		18.42	■□□□□ 0.54
CNBP-208	ENST00000504813	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	18.42	■□□□□ 0.54
CNBP-208	ENST00000504813	ZNF408	Q9H9D4	720 aa		18.42	■□□□□ 0.54
CNBP-208	ENST00000504813	WDR33	Q9C0J8	1336 aa	Known RBP	18.42	■□□□□ 0.54
CNBP-208	ENST00000504813	ANGEL2	Q5VTE6	544 aa	Known RBP	18.41	■□□□□ 0.54
CNBP-208	ENST00000504813	CERS5	Q8N5B7	392 aa		18.41	■□□□□ 0.54
CNBP-208	ENST00000504813	PITPNM2	Q9BZ72	1349 aa		18.41	■□□□□ 0.54
CNBP-208	ENST00000504813	TRIM27	P14373	513 aa		18.4	■□□□□ 0.54
CNBP-208	ENST00000504813	PTPN12	Q05209	780 aa	Known RBP	18.4	■□□□□ 0.54
CNBP-208	ENST00000504813	NBPF9	Q3BBW0	867 aa		18.4	■□□□□ 0.54
CNBP-208	ENST00000504813	METTL24	Q5JXM2	366 aa		18.4	■□□□□ 0.54
CNBP-208	ENST00000504813	KIAA0825	Q8IV33	1275 aa		18.4	■□□□□ 0.54
CNBP-208	ENST00000504813	SULF1	Q8IWU6	871 aa		18.4	■□□□□ 0.54
CNBP-208	ENST00000504813	FAM84B	Q96KN1	310 aa	Predicted RBP	18.4	■□□□□ 0.54
CNBP-208	ENST00000504813	MEIS3	Q99687	375 aa		18.4	■□□□□ 0.54
CNBP-208	ENST00000504813	TNN	Q9UQP3	1299 aa		18.4	■□□□□ 0.54
CNBP-208	ENST00000504813	WNT10B	O00744	389 aa		18.39	■□□□□ 0.54
CNBP-208	ENST00000504813	IPO8	O15397	1037 aa	Known RBP	18.39	■□□□□ 0.54
CNBP-208	ENST00000504813	PDE8B	O95263	885 aa		18.39	■□□□□ 0.54

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