RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 ZNF521Q96K83 1311 aa16.87■□□□□ 0.29
DDX41-204ENST00000504807 H7C1W4 665 aa16.86■□□□□ 0.29
DDX41-204ENST00000504807 RBM26Q5T8P6 1007 aaKnown RBP16.86■□□□□ 0.29
DDX41-204ENST00000504807 PODXL2Q9NZ53 605 aa16.86■□□□□ 0.29
DDX41-204ENST00000504807 A0A0C4DFX4 3053 aa16.85■□□□□ 0.29
DDX41-204ENST00000504807 F6X3S4 739 aa16.85■□□□□ 0.29
DDX41-204ENST00000504807 ECE2O60344 883 aa16.85■□□□□ 0.29
DDX41-204ENST00000504807 UBE3BQ7Z3V4 1068 aa16.85■□□□□ 0.29
DDX41-204ENST00000504807 SLC17A8Q8NDX2 589 aa16.85■□□□□ 0.29
DDX41-204ENST00000504807 CUL9Q8IWT3 2517 aa16.85■□□□□ 0.29
DDX41-204ENST00000504807 ZNF646O15015 1829 aaPredicted RBP16.84■□□□□ 0.29
DDX41-204ENST00000504807 GPR25O00155 361 aa16.84■□□□□ 0.29
DDX41-204ENST00000504807 GCKRQ14397 625 aa16.84■□□□□ 0.29
DDX41-204ENST00000504807 CCDC152Q4G0S7 254 aa16.84■□□□□ 0.29
DDX41-204ENST00000504807 UFL1O94874 794 aa16.83■□□□□ 0.28
DDX41-204ENST00000504807 FKBP5Q13451 457 aaPredicted RBP16.83■□□□□ 0.28
DDX41-204ENST00000504807 TRIOBPQ9H2D6 2365 aa16.82■□□□□ 0.28
DDX41-204ENST00000504807 MYH3P11055 1940 aa16.82■□□□□ 0.28
DDX41-204ENST00000504807 ASTN2O75129 1339 aaPredicted RBP16.82■□□□□ 0.28
DDX41-204ENST00000504807 SULF1Q8IWU6 871 aa16.82■□□□□ 0.28
DDX41-204ENST00000504807 DNAAF4Q8WXU2 420 aa16.82■□□□□ 0.28
DDX41-204ENST00000504807 CDCA5Q96FF9 252 aa16.82■□□□□ 0.28
DDX41-204ENST00000504807 KLRK1P26718 216 aa16.81■□□□□ 0.28
DDX41-204ENST00000504807 NEXNQ0ZGT2 675 aa16.81■□□□□ 0.28
DDX41-204ENST00000504807 TXNRD3Q86VQ6 643 aa16.81■□□□□ 0.28
DDX41-204ENST00000504807 ANKRD18AQ8IVF6 992 aa16.81■□□□□ 0.28
DDX41-204ENST00000504807 DPF2Q92785 391 aa16.81■□□□□ 0.28
DDX41-204ENST00000504807 ANKIB1Q9P2G1 1089 aa16.81■□□□□ 0.28
DDX41-204ENST00000504807 GGA1Q9UJY5 639 aa16.81■□□□□ 0.28
DDX41-204ENST00000504807 MINPP1Q9UNW1 487 aa16.81■□□□□ 0.28
DDX41-204ENST00000504807 HTTP42858 3142 aa16.81■□□□□ 0.28
DDX41-204ENST00000504807 FKTNO75072 461 aa16.8■□□□□ 0.28
DDX41-204ENST00000504807 EPHA10Q5JZY3 1008 aa16.8■□□□□ 0.28
DDX41-204ENST00000504807 BEND3Q5T5X7 828 aa16.8■□□□□ 0.28
DDX41-204ENST00000504807 PLA2G12BQ9BX93 195 aa16.8■□□□□ 0.28
DDX41-204ENST00000504807 GGA3Q9NZ52 723 aa16.8■□□□□ 0.28
DDX41-204ENST00000504807 CSF1RP07333 972 aa16.79■□□□□ 0.28
DDX41-204ENST00000504807 EN2P19622 333 aaPredicted RBP16.79■□□□□ 0.28
DDX41-204ENST00000504807 FOXO4P98177 505 aa16.79■□□□□ 0.28
DDX41-204ENST00000504807 LINS1Q8NG48 757 aa16.79■□□□□ 0.28
DDX41-204ENST00000504807 EYA3Q99504 573 aa16.79■□□□□ 0.28
DDX41-204ENST00000504807 MXD3Q9BW11 206 aa16.79■□□□□ 0.28
DDX41-204ENST00000504807 CHMP4AQ9BY43 222 aa16.79■□□□□ 0.28
DDX41-204ENST00000504807 PSME4Q14997 1843 aa16.79■□□□□ 0.28
DDX41-204ENST00000504807 XDHP47989 1333 aa16.78■□□□□ 0.28
DDX41-204ENST00000504807 SNAP23O00161 211 aa16.78■□□□□ 0.28
DDX41-204ENST00000504807 VIL1P09327 827 aaKnown RBP16.78■□□□□ 0.28
DDX41-204ENST00000504807 MKRN3Q13064 507 aaKnown RBP16.78■□□□□ 0.28
DDX41-204ENST00000504807 KIF4BQ2VIQ3 1234 aa16.78■□□□□ 0.28
DDX41-204ENST00000504807 MOB2Q70IA6 237 aa16.78■□□□□ 0.28
DDX41-204ENST00000504807 ZC3H12CQ9C0D7 883 aaKnown RBP16.78■□□□□ 0.28
DDX41-204ENST00000504807 R3HDMLQ9H3Y0 253 aa16.78■□□□□ 0.28
DDX41-204ENST00000504807 BSDC1Q9NW68 430 aaPredicted RBP16.78■□□□□ 0.28
DDX41-204ENST00000504807 A0A1B0GUL6 1792 aa16.78■□□□□ 0.28
DDX41-204ENST00000504807 BRCA2P51587 3418 aa16.77■□□□□ 0.28
DDX41-204ENST00000504807 ITGA6P23229 1130 aa16.77■□□□□ 0.28
DDX41-204ENST00000504807 INTS3Q68E01 1043 aaKnown RBP16.77■□□□□ 0.28
DDX41-204ENST00000504807 GMLQ99445 158 aa16.77■□□□□ 0.28
DDX41-204ENST00000504807 CEP290O15078 2479 aa16.77■□□□□ 0.27
DDX41-204ENST00000504807 CENPFP49454 3210 aa16.77■□□□□ 0.27
DDX41-204ENST00000504807 IRS2Q9Y4H2 1338 aa16.76■□□□□ 0.27
DDX41-204ENST00000504807 HSP90B1P14625 803 aaKnown RBP16.76■□□□□ 0.27
DDX41-204ENST00000504807 NOM1Q5C9Z4 860 aaKnown RBP16.76■□□□□ 0.27
DDX41-204ENST00000504807 CDC5LQ99459 802 aaKnown RBP16.76■□□□□ 0.27
DDX41-204ENST00000504807 TRIM17Q9Y577 477 aa16.76■□□□□ 0.27
DDX41-204ENST00000504807 ZNF609O15014 1411 aa16.76■□□□□ 0.27
DDX41-204ENST00000504807 MED23Q9ULK4 1368 aa16.76■□□□□ 0.27
DDX41-204ENST00000504807 CACNA1FO60840 1977 aa16.75■□□□□ 0.27
DDX41-204ENST00000504807 UBE2Q2LH0YL09 131 aa16.75■□□□□ 0.27
DDX41-204ENST00000504807 ATP2B4P23634 1241 aa16.75■□□□□ 0.27
DDX41-204ENST00000504807 CCT4P50991 539 aaKnown RBP16.75■□□□□ 0.27
DDX41-204ENST00000504807 MYH16Q9H6N6 1097 aa16.75■□□□□ 0.27
DDX41-204ENST00000504807 RPS12P25398 132 aaKnown RBP16.74■□□□□ 0.27
DDX41-204ENST00000504807 TM4SF4P48230 202 aa16.74■□□□□ 0.27
DDX41-204ENST00000504807 FKBP1BP68106 108 aa16.74■□□□□ 0.27
DDX41-204ENST00000504807 RSBN1LQ6PCB5 846 aaPredicted RBP16.74■□□□□ 0.27
DDX41-204ENST00000504807 CDCA7LQ96GN5 454 aa16.74■□□□□ 0.27
DDX41-204ENST00000504807 KAZALD1Q96I82 304 aa16.74■□□□□ 0.27
DDX41-204ENST00000504807 SCAF8Q9UPN6 1271 aaKnown RBP16.74■□□□□ 0.27
DDX41-204ENST00000504807 H0YGN5 161 aa16.73■□□□□ 0.27
DDX41-204ENST00000504807 ZNF280AP59817 542 aaPredicted RBP16.73■□□□□ 0.27
DDX41-204ENST00000504807 ANGEL2Q5VTE6 544 aaKnown RBP16.73■□□□□ 0.27
DDX41-204ENST00000504807 ZNF594Q96JF6 807 aaPredicted RBP16.73■□□□□ 0.27
DDX41-204ENST00000504807 RANBP2P49792 3224 aaKnown RBP16.72■□□□□ 0.27
DDX41-204ENST00000504807 KIAA0100Q14667 2235 aaKnown RBP16.72■□□□□ 0.27
DDX41-204ENST00000504807 POLR2AP24928 1970 aaKnown RBP16.72■□□□□ 0.27
DDX41-204ENST00000504807 CHRNDQ07001 517 aa16.72■□□□□ 0.27
DDX41-204ENST00000504807 DACT2Q5SW24 774 aa16.72■□□□□ 0.27
DDX41-204ENST00000504807 OTOP1Q7RTM1 612 aa16.72■□□□□ 0.27
DDX41-204ENST00000504807 MRPL50Q8N5N7 158 aaKnown RBP16.72■□□□□ 0.27
DDX41-204ENST00000504807 HELBQ8NG08 1087 aaPredicted RBP16.72■□□□□ 0.27
DDX41-204ENST00000504807 TAF5LO75529 589 aa16.71■□□□□ 0.27
DDX41-204ENST00000504807 TTLL12Q14166 644 aaPredicted RBP16.71■□□□□ 0.27
DDX41-204ENST00000504807 LMBR1LQ6UX01 489 aa16.71■□□□□ 0.27
DDX41-204ENST00000504807 CHRDL2Q6WN34 429 aa16.71■□□□□ 0.27
DDX41-204ENST00000504807 OTUD5Q96G74 571 aa16.71■□□□□ 0.27
DDX41-204ENST00000504807 SUCLG2Q96I99 432 aa16.71■□□□□ 0.27
DDX41-204ENST00000504807 ZNF804BA4D1E1 1349 aa16.7■□□□□ 0.26
DDX41-204ENST00000504807 USP17L3A6NCW0 530 aa16.7■□□□□ 0.26
DDX41-204ENST00000504807 USP17L4A6NCW7 530 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms