RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 KLRK1P26718 216 aa17.2■□□□□ 0.34
DDR1-253ENST00000504651 IARSP41252 1262 aaKnown RBP17.2■□□□□ 0.34
DDR1-253ENST00000504651 TNNI3KQ59H18 835 aa17.2■□□□□ 0.34
DDR1-253ENST00000504651 LPIN2Q92539 896 aa17.2■□□□□ 0.34
DDR1-253ENST00000504651 CCDC136Q96JN2 1154 aa17.2■□□□□ 0.34
DDR1-253ENST00000504651 ZC3H12CQ9C0D7 883 aaKnown RBP17.2■□□□□ 0.34
DDR1-253ENST00000504651 BCL11AQ9H165 835 aa17.2■□□□□ 0.34
DDR1-253ENST00000504651 GPR108Q9NPR9 543 aa17.2■□□□□ 0.34
DDR1-253ENST00000504651 ZBTB47Q9UFB7 747 aaPredicted RBP17.2■□□□□ 0.34
DDR1-253ENST00000504651 FPGT-TNNI3KV9GXZ4 949 aa17.2■□□□□ 0.34
DDR1-253ENST00000504651 COL4A5P29400 1685 aa17.2■□□□□ 0.34
DDR1-253ENST00000504651 KIAA2012Q0VF49 1180 aa17.19■□□□□ 0.34
DDR1-253ENST00000504651 SMC5Q8IY18 1101 aa17.19■□□□□ 0.34
DDR1-253ENST00000504651 CLASRPQ8N2M8 674 aaKnown RBP17.19■□□□□ 0.34
DDR1-253ENST00000504651 LARGE2Q8N3Y3 721 aa17.19■□□□□ 0.34
DDR1-253ENST00000504651 G3V3G9 751 aa17.18■□□□□ 0.34
DDR1-253ENST00000504651 LMNB1P20700 586 aa17.18■□□□□ 0.34
DDR1-253ENST00000504651 DCAF8Q5TAQ9 597 aa17.18■□□□□ 0.34
DDR1-253ENST00000504651 AACSQ86V21 672 aa17.18■□□□□ 0.34
DDR1-253ENST00000504651 NEUROD6Q96NK8 337 aa17.18■□□□□ 0.34
DDR1-253ENST00000504651 VPS33BQ9H267 617 aa17.18■□□□□ 0.34
DDR1-253ENST00000504651 PPP4R2Q9NY27 417 aa17.18■□□□□ 0.34
DDR1-253ENST00000504651 SRCAPQ6ZRS2 3230 aa17.18■□□□□ 0.34
DDR1-253ENST00000504651 IRS2Q9Y4H2 1338 aa17.18■□□□□ 0.34
DDR1-253ENST00000504651 SMARCA5O60264 1052 aaPredicted RBP17.17■□□□□ 0.34
DDR1-253ENST00000504651 PRELPP51888 382 aa17.17■□□□□ 0.34
DDR1-253ENST00000504651 ANKRD45Q5TZF3 282 aa17.17■□□□□ 0.34
DDR1-253ENST00000504651 C15orf52Q6ZUT6 534 aaKnown RBP17.17■□□□□ 0.34
DDR1-253ENST00000504651 ZNF804AQ7Z570 1209 aa17.17■□□□□ 0.34
DDR1-253ENST00000504651 TXNRD3Q86VQ6 643 aa17.17■□□□□ 0.34
DDR1-253ENST00000504651 NIM1KQ8IY84 436 aa17.17■□□□□ 0.34
DDR1-253ENST00000504651 RNF181Q9P0P0 153 aa17.17■□□□□ 0.34
DDR1-253ENST00000504651 PSME4Q14997 1843 aa17.17■□□□□ 0.34
DDR1-253ENST00000504651 CHD4Q14839 1912 aa17.16■□□□□ 0.34
DDR1-253ENST00000504651 ADORA1P30542 326 aa17.16■□□□□ 0.34
DDR1-253ENST00000504651 GYG1P46976 350 aa17.16■□□□□ 0.34
DDR1-253ENST00000504651 TIMM10P62072 90 aa17.16■□□□□ 0.34
DDR1-253ENST00000504651 CAVIN4Q5BKX8 364 aa17.16■□□□□ 0.34
DDR1-253ENST00000504651 B4GALNT3Q6L9W6 998 aa17.16■□□□□ 0.34
DDR1-253ENST00000504651 XAGE2Q96GT9 111 aa17.16■□□□□ 0.34
DDR1-253ENST00000504651 ECE2O60344 883 aa17.15■□□□□ 0.34
DDR1-253ENST00000504651 IFIT2P09913 472 aaKnown RBP17.15■□□□□ 0.34
DDR1-253ENST00000504651 DOK7Q18PE1 504 aa17.15■□□□□ 0.34
DDR1-253ENST00000504651 GORABQ5T7V8 394 aa17.15■□□□□ 0.34
DDR1-253ENST00000504651 C9orf131Q5VYM1 1079 aa17.15■□□□□ 0.34
DDR1-253ENST00000504651 CENPQQ7L2Z9 268 aaPredicted RBP17.15■□□□□ 0.34
DDR1-253ENST00000504651 VPS37DQ86XT2 251 aa17.15■□□□□ 0.34
DDR1-253ENST00000504651 JDP2Q8WYK2 163 aa17.15■□□□□ 0.34
DDR1-253ENST00000504651 EAF2Q96CJ1 260 aaPredicted RBP17.15■□□□□ 0.34
DDR1-253ENST00000504651 DBNDD2Q9BQY9 259 aa17.15■□□□□ 0.34
DDR1-253ENST00000504651 CCDC8Q9H0W5 538 aaPredicted RBP17.15■□□□□ 0.34
DDR1-253ENST00000504651 DBNDD1Q9H9R9 158 aa17.15■□□□□ 0.34
DDR1-253ENST00000504651 KDM2BQ8NHM5 1336 aa17.15■□□□□ 0.34
DDR1-253ENST00000504651 HIBADHP31937 336 aaKnown RBP17.14■□□□□ 0.33
DDR1-253ENST00000504651 COA1Q9GZY4 146 aa17.14■□□□□ 0.33
DDR1-253ENST00000504651 TLR7Q9NYK1 1049 aaKnown RBP17.14■□□□□ 0.33
DDR1-253ENST00000504651 ZNF646O15015 1829 aaPredicted RBP17.14■□□□□ 0.33
DDR1-253ENST00000504651 FAM84BQ96KN1 310 aaPredicted RBP17.13■□□□□ 0.33
DDR1-253ENST00000504651 LNPKQ9C0E8 428 aa17.13■□□□□ 0.33
DDR1-253ENST00000504651 DBNLQ9UJU6 430 aaKnown RBP17.13■□□□□ 0.33
DDR1-253ENST00000504651 SCN9AQ15858 1988 aa17.13■□□□□ 0.33
DDR1-253ENST00000504651 PHKA1P46020 1223 aa17.12■□□□□ 0.33
DDR1-253ENST00000504651 BCAMP50895 628 aa17.12■□□□□ 0.33
DDR1-253ENST00000504651 TTC39AQ5SRH9 613 aa17.12■□□□□ 0.33
DDR1-253ENST00000504651 CCDC102BQ68D86 513 aa17.12■□□□□ 0.33
DDR1-253ENST00000504651 CD209Q9NNX6 404 aa17.12■□□□□ 0.33
DDR1-253ENST00000504651 FRAT2O75474 233 aaPredicted RBP17.11■□□□□ 0.33
DDR1-253ENST00000504651 NUCB1Q02818 461 aa17.11■□□□□ 0.33
DDR1-253ENST00000504651 CCDC158Q5M9N0 1113 aa17.11■□□□□ 0.33
DDR1-253ENST00000504651 FBXO33Q7Z6M2 555 aa17.11■□□□□ 0.33
DDR1-253ENST00000504651 CHD1LQ86WJ1 897 aa17.11■□□□□ 0.33
DDR1-253ENST00000504651 GNL3LQ9NVN8 582 aaKnown RBP17.11■□□□□ 0.33
DDR1-253ENST00000504651 ZNRF3Q9ULT6 936 aa17.11■□□□□ 0.33
DDR1-253ENST00000504651 IQSEC3Q9UPP2 1182 aaPredicted RBP17.11■□□□□ 0.33
DDR1-253ENST00000504651 IL1R1P14778 569 aa17.1■□□□□ 0.33
DDR1-253ENST00000504651 PODNQ7Z5L7 613 aa17.1■□□□□ 0.33
DDR1-253ENST00000504651 FBXW7Q969H0 707 aa17.1■□□□□ 0.33
DDR1-253ENST00000504651 GPATCH3Q96I76 525 aa17.1■□□□□ 0.33
DDR1-253ENST00000504651 COL1A1P02452 1464 aaPredicted RBP17.1■□□□□ 0.33
DDR1-253ENST00000504651 GOLGB1Q14789 3259 aaKnown RBP17.09■□□□□ 0.33
DDR1-253ENST00000504651 YDJCA8MPS7 323 aa17.09■□□□□ 0.33
DDR1-253ENST00000504651 UQCRFS1P1P0C7P4 283 aa17.09■□□□□ 0.33
DDR1-253ENST00000504651 EIF6P56537 245 aaKnown RBP17.09■□□□□ 0.33
DDR1-253ENST00000504651 TDRD7Q8NHU6 1098 aaKnown RBP17.09■□□□□ 0.33
DDR1-253ENST00000504651 ZC3H4Q9UPT8 1303 aaKnown RBP17.09■□□□□ 0.33
DDR1-253ENST00000504651 AKAP11Q9UKA4 1901 aa17.08■□□□□ 0.33
DDR1-253ENST00000504651 ZNF541Q9H0D2 1346 aa17.08■□□□□ 0.32
DDR1-253ENST00000504651 FZD9O00144 591 aa17.08■□□□□ 0.32
DDR1-253ENST00000504651 SEMA3EO15041 775 aa17.08■□□□□ 0.32
DDR1-253ENST00000504651 ARID4AP29374 1257 aaPredicted RBP17.08■□□□□ 0.32
DDR1-253ENST00000504651 C16orf71Q8IYS4 520 aaPredicted RBP17.08■□□□□ 0.32
DDR1-253ENST00000504651 RAD17O75943 681 aa17.07■□□□□ 0.32
DDR1-253ENST00000504651 MX1P20591 662 aa17.07■□□□□ 0.32
DDR1-253ENST00000504651 CHAF1AQ13111 956 aaPredicted RBP17.07■□□□□ 0.32
DDR1-253ENST00000504651 RASGRF1Q13972 1273 aa17.07■□□□□ 0.32
DDR1-253ENST00000504651 CIAPIN1Q6FI81 312 aa17.07■□□□□ 0.32
DDR1-253ENST00000504651 OTUD7AQ8TE49 926 aaPredicted RBP17.07■□□□□ 0.32
DDR1-253ENST00000504651 DENND2AQ9ULE3 1009 aa17.07■□□□□ 0.32
DDR1-253ENST00000504651 JAG2Q9Y219 1238 aa17.07■□□□□ 0.32
DDR1-253ENST00000504651 GTF3C3Q9Y5Q9 886 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms