RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 PUS3Q9BZE2 481 aaKnown RBP17.92■□□□□ 0.46
HOXC9-202ENST00000504557 API5Q9BZZ5 524 aaKnown RBP17.92■□□□□ 0.46
HOXC9-202ENST00000504557 CREBZFQ9NS37 354 aa17.92■□□□□ 0.46
HOXC9-202ENST00000504557 ZNF646O15015 1829 aaPredicted RBP17.92■□□□□ 0.46
HOXC9-202ENST00000504557 UTYO14607 1347 aa17.92■□□□□ 0.46
HOXC9-202ENST00000504557 TMEM88BA6NKF7 163 aa17.91■□□□□ 0.46
HOXC9-202ENST00000504557 BCAR3O75815 825 aa17.91■□□□□ 0.46
HOXC9-202ENST00000504557 VIL1P09327 827 aaKnown RBP17.91■□□□□ 0.46
HOXC9-202ENST00000504557 RPS12P25398 132 aaKnown RBP17.91■□□□□ 0.46
HOXC9-202ENST00000504557 RSBN1LQ6PCB5 846 aaPredicted RBP17.91■□□□□ 0.46
HOXC9-202ENST00000504557 PODNQ7Z5L7 613 aa17.91■□□□□ 0.46
HOXC9-202ENST00000504557 ANKRD44Q8N8A2 993 aa17.91■□□□□ 0.46
HOXC9-202ENST00000504557 DPF2Q92785 391 aa17.91■□□□□ 0.46
HOXC9-202ENST00000504557 ZNF408Q9H9D4 720 aa17.91■□□□□ 0.46
HOXC9-202ENST00000504557 KLHDC4Q8TBB5 520 aa17.9■□□□□ 0.46
HOXC9-202ENST00000504557 COA1Q9GZY4 146 aa17.9■□□□□ 0.46
HOXC9-202ENST00000504557 ABT1Q9ULW3 272 aaKnown RBP17.9■□□□□ 0.46
HOXC9-202ENST00000504557 KIF16BQ96L93 1317 aa17.9■□□□□ 0.46
HOXC9-202ENST00000504557 UBTFL1P0CB47 393 aaPredicted RBP17.89■□□□□ 0.45
HOXC9-202ENST00000504557 KIF4BQ2VIQ3 1234 aa17.89■□□□□ 0.45
HOXC9-202ENST00000504557 TNNQ9UQP3 1299 aa17.89■□□□□ 0.45
HOXC9-202ENST00000504557 GTF2IP78347 998 aa17.88■□□□□ 0.45
HOXC9-202ENST00000504557 DLK2Q6UY11 383 aa17.88■□□□□ 0.45
HOXC9-202ENST00000504557 PAXIP1Q6ZW49 1069 aaPredicted RBP17.88■□□□□ 0.45
HOXC9-202ENST00000504557 CLUAP1Q96AJ1 413 aa17.88■□□□□ 0.45
HOXC9-202ENST00000504557 JAG2Q9Y219 1238 aa17.88■□□□□ 0.45
HOXC9-202ENST00000504557 GRM1Q13255 1194 aa17.87■□□□□ 0.45
HOXC9-202ENST00000504557 RABL6Q3YEC7 729 aaPredicted RBP17.87■□□□□ 0.45
HOXC9-202ENST00000504557 LRRC24Q50LG9 513 aa17.87■□□□□ 0.45
HOXC9-202ENST00000504557 TTLL5Q6EMB2 1281 aa17.87■□□□□ 0.45
HOXC9-202ENST00000504557 USP48Q86UV5 1035 aa17.87■□□□□ 0.45
HOXC9-202ENST00000504557 AGBL3Q8NEM8 1001 aa17.87■□□□□ 0.45
HOXC9-202ENST00000504557 ASTN2O75129 1339 aaPredicted RBP17.87■□□□□ 0.45
HOXC9-202ENST00000504557 USP17L8P0C7I0 530 aa17.86■□□□□ 0.45
HOXC9-202ENST00000504557 METTL24Q5JXM2 366 aa17.86■□□□□ 0.45
HOXC9-202ENST00000504557 DACT2Q5SW24 774 aa17.86■□□□□ 0.45
HOXC9-202ENST00000504557 ZNF804AQ7Z570 1209 aa17.86■□□□□ 0.45
HOXC9-202ENST00000504557 CD209Q9NNX6 404 aa17.86■□□□□ 0.45
HOXC9-202ENST00000504557 LRRFIP2Q9Y608 721 aaKnown RBP17.86■□□□□ 0.45
HOXC9-202ENST00000504557 ADM5C9JUS6 153 aa17.85■□□□□ 0.45
HOXC9-202ENST00000504557 IPO8O15397 1037 aaKnown RBP17.85■□□□□ 0.45
HOXC9-202ENST00000504557 CELF2O95319 508 aaKnown RBP17.85■□□□□ 0.45
HOXC9-202ENST00000504557 BRPF1P55201 1214 aaPredicted RBP17.85■□□□□ 0.45
HOXC9-202ENST00000504557 CDC37L1Q7L3B6 337 aa17.85■□□□□ 0.45
HOXC9-202ENST00000504557 DCPSQ96C86 337 aaKnown RBP17.85■□□□□ 0.45
HOXC9-202ENST00000504557 MEIS3Q99687 375 aa17.85■□□□□ 0.45
HOXC9-202ENST00000504557 GGA3Q9NZ52 723 aa17.85■□□□□ 0.45
HOXC9-202ENST00000504557 SCAF8Q9UPN6 1271 aaKnown RBP17.85■□□□□ 0.45
HOXC9-202ENST00000504557 MYH13Q9UKX3 1938 aa17.84■□□□□ 0.45
HOXC9-202ENST00000504557 CNTNAP1P78357 1384 aa17.84■□□□□ 0.45
HOXC9-202ENST00000504557 ZBED9Q6R2W3 1325 aa17.84■□□□□ 0.45
HOXC9-202ENST00000504557 TRIM27P14373 513 aa17.84■□□□□ 0.45
HOXC9-202ENST00000504557 GYG1P46976 350 aa17.84■□□□□ 0.45
HOXC9-202ENST00000504557 SCARF1Q14162 830 aa17.84■□□□□ 0.45
HOXC9-202ENST00000504557 STRIP1Q5VSL9 837 aa17.84■□□□□ 0.45
HOXC9-202ENST00000504557 KRT26Q7Z3Y9 468 aa17.84■□□□□ 0.45
HOXC9-202ENST00000504557 KIAA0825Q8IV33 1275 aa17.84■□□□□ 0.45
HOXC9-202ENST00000504557 ZC3H15Q8WU90 426 aaKnown RBP17.84■□□□□ 0.45
HOXC9-202ENST00000504557 SIL1Q9H173 461 aa17.84■□□□□ 0.45
HOXC9-202ENST00000504557 MYOZ2Q9NPC6 264 aa17.84■□□□□ 0.45
HOXC9-202ENST00000504557 MROH5Q6ZUA9 1318 aa17.83■□□□□ 0.44
HOXC9-202ENST00000504557 IRS2Q9Y4H2 1338 aa17.83■□□□□ 0.44
HOXC9-202ENST00000504557 F8W031 263 aaPredicted RBP17.83■□□□□ 0.44
HOXC9-202ENST00000504557 DEFB115Q30KQ5 88 aa17.83■□□□□ 0.44
HOXC9-202ENST00000504557 CST9Q5W186 159 aa17.83■□□□□ 0.44
HOXC9-202ENST00000504557 OGFOD1Q8N543 542 aa17.83■□□□□ 0.44
HOXC9-202ENST00000504557 GMLQ99445 158 aa17.83■□□□□ 0.44
HOXC9-202ENST00000504557 PGAP2Q9UHJ9 254 aa17.83■□□□□ 0.44
HOXC9-202ENST00000504557 RIPOR2Q9Y4F9 1068 aa17.83■□□□□ 0.44
HOXC9-202ENST00000504557 VEGFBP49765 207 aa17.82■□□□□ 0.44
HOXC9-202ENST00000504557 ZNF280AP59817 542 aaPredicted RBP17.82■□□□□ 0.44
HOXC9-202ENST00000504557 ANGEL2Q5VTE6 544 aaKnown RBP17.82■□□□□ 0.44
HOXC9-202ENST00000504557 ATF7IPQ6VMQ6 1270 aa17.82■□□□□ 0.44
HOXC9-202ENST00000504557 JMYQ8N9B5 988 aa17.82■□□□□ 0.44
HOXC9-202ENST00000504557 ARHGAP45Q92619 1136 aa17.82■□□□□ 0.44
HOXC9-202ENST00000504557 IQSEC3Q9UPP2 1182 aaPredicted RBP17.82■□□□□ 0.44
HOXC9-202ENST00000504557 MYO3BQ8WXR4 1341 aa17.81■□□□□ 0.44
HOXC9-202ENST00000504557 SASH1O94885 1247 aa17.81■□□□□ 0.44
HOXC9-202ENST00000504557 UBE4AQ14139 1066 aa17.81■□□□□ 0.44
HOXC9-202ENST00000504557 ZKSCAN2Q63HK3 967 aa17.81■□□□□ 0.44
HOXC9-202ENST00000504557 INTS3Q68E01 1043 aaKnown RBP17.81■□□□□ 0.44
HOXC9-202ENST00000504557 C15orf52Q6ZUT6 534 aaKnown RBP17.81■□□□□ 0.44
HOXC9-202ENST00000504557 VPS37DQ86XT2 251 aa17.81■□□□□ 0.44
HOXC9-202ENST00000504557 SULF1Q8IWU6 871 aa17.81■□□□□ 0.44
HOXC9-202ENST00000504557 HIBADHP31937 336 aaKnown RBP17.8■□□□□ 0.44
HOXC9-202ENST00000504557 NBPF9Q3BBW0 867 aa17.8■□□□□ 0.44
HOXC9-202ENST00000504557 ZNF609O15014 1411 aa17.8■□□□□ 0.44
HOXC9-202ENST00000504557 FRAT2O75474 233 aaPredicted RBP17.79■□□□□ 0.44
HOXC9-202ENST00000504557 HSPA1AP0DMV8 641 aaKnown RBP17.79■□□□□ 0.44
HOXC9-202ENST00000504557 HSPA1BP0DMV9 641 aaKnown RBP17.79■□□□□ 0.44
HOXC9-202ENST00000504557 IL1R1P14778 569 aa17.79■□□□□ 0.44
HOXC9-202ENST00000504557 RFX5P48382 616 aaPredicted RBP17.79■□□□□ 0.44
HOXC9-202ENST00000504557 PTPN12Q05209 780 aaKnown RBP17.79■□□□□ 0.44
HOXC9-202ENST00000504557 CHAF1AQ13111 956 aaPredicted RBP17.79■□□□□ 0.44
HOXC9-202ENST00000504557 CYP4F22Q6NT55 531 aa17.79■□□□□ 0.44
HOXC9-202ENST00000504557 CERS5Q8N5B7 392 aa17.79■□□□□ 0.44
HOXC9-202ENST00000504557 HDAC9Q9UKV0 1011 aa17.79■□□□□ 0.44
HOXC9-202ENST00000504557 PA2G4Q9UQ80 394 aaKnown RBP17.79■□□□□ 0.44
HOXC9-202ENST00000504557 HDAC5Q9UQL6 1122 aa17.79■□□□□ 0.44
HOXC9-202ENST00000504557 ECM29Q5VYK3 1845 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms