RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 H3BM21 787 aa10.89□□□□□ -0.67
UBE2B-204ENST00000504431 GTPBP3Q969Y2 492 aaKnown RBP10.89□□□□□ -0.67
UBE2B-204ENST00000504431 BRD7Q9NPI1 651 aa10.89□□□□□ -0.67
UBE2B-204ENST00000504431 DMGDHQ9UI17 866 aaKnown RBP10.89□□□□□ -0.67
UBE2B-204ENST00000504431 UBR1Q8IWV7 1749 aa10.89□□□□□ -0.67
UBE2B-204ENST00000504431 NLRP1Q9C000 1473 aa10.88□□□□□ -0.67
UBE2B-204ENST00000504431 KHNYNO15037 678 aaKnown RBP10.88□□□□□ -0.67
UBE2B-204ENST00000504431 NDUFB5O43674 189 aa10.88□□□□□ -0.67
UBE2B-204ENST00000504431 THBS1P07996 1170 aa10.88□□□□□ -0.67
UBE2B-204ENST00000504431 TMCO4Q5TGY1 634 aa10.88□□□□□ -0.67
UBE2B-204ENST00000504431 THEMISQ8N1K5 641 aaPredicted RBP10.88□□□□□ -0.67
UBE2B-204ENST00000504431 VWA5B2Q8N398 1253 aa10.88□□□□□ -0.67
UBE2B-204ENST00000504431 PIK3R5Q8WYR1 880 aa10.88□□□□□ -0.67
UBE2B-204ENST00000504431 C11orf16Q9NQ32 467 aa10.88□□□□□ -0.67
UBE2B-204ENST00000504431 DCDC2BA2VCK2 349 aa10.87□□□□□ -0.67
UBE2B-204ENST00000504431 TERTO14746 1132 aaKnown RBP10.87□□□□□ -0.67
UBE2B-204ENST00000504431 LTKP29376 864 aa10.87□□□□□ -0.67
UBE2B-204ENST00000504431 INPP5BP32019 993 aa10.87□□□□□ -0.67
UBE2B-204ENST00000504431 USP5P45974 858 aa10.87□□□□□ -0.67
UBE2B-204ENST00000504431 UBAP2LQ14157 1087 aaKnown RBP10.87□□□□□ -0.67
UBE2B-204ENST00000504431 TTC16Q8NEE8 873 aa10.87□□□□□ -0.67
UBE2B-204ENST00000504431 KLRG1Q96E93 195 aa10.87□□□□□ -0.67
UBE2B-204ENST00000504431 BRPF3Q9ULD4 1205 aa10.87□□□□□ -0.67
UBE2B-204ENST00000504431 PLA2R1Q13018 1463 aa10.87□□□□□ -0.67
UBE2B-204ENST00000504431 RPRD2Q5VT52 1461 aaKnown RBP10.87□□□□□ -0.67
UBE2B-204ENST00000504431 SPHKAPQ2M3C7 1700 aa10.87□□□□□ -0.67
UBE2B-204ENST00000504431 MZF1P28698 734 aaPredicted RBP10.86□□□□□ -0.67
UBE2B-204ENST00000504431 KCNQ4P56696 695 aa10.86□□□□□ -0.67
UBE2B-204ENST00000504431 ARHGAP4P98171 946 aa10.86□□□□□ -0.67
UBE2B-204ENST00000504431 TNP2Q05952 138 aa10.86□□□□□ -0.67
UBE2B-204ENST00000504431 PCGF6Q9BYE7 350 aa10.86□□□□□ -0.67
UBE2B-204ENST00000504431 NDFIP2Q9NV92 336 aa10.86□□□□□ -0.67
UBE2B-204ENST00000504431 SLC52A1Q9NWF4 448 aa10.86□□□□□ -0.67
UBE2B-204ENST00000504431 KCNH4Q9UQ05 1017 aa10.86□□□□□ -0.67
UBE2B-204ENST00000504431 FNDC3AQ9Y2H6 1198 aaKnown RBP10.86□□□□□ -0.67
UBE2B-204ENST00000504431 EFSO43281 561 aa10.85□□□□□ -0.67
UBE2B-204ENST00000504431 BNIP3LO60238 219 aa10.85□□□□□ -0.67
UBE2B-204ENST00000504431 VSIG8P0DPA2 414 aa10.85□□□□□ -0.67
UBE2B-204ENST00000504431 MAPTP10636 758 aaKnown RBP10.85□□□□□ -0.67
UBE2B-204ENST00000504431 ANKLE2Q86XL3 938 aa10.85□□□□□ -0.67
UBE2B-204ENST00000504431 CITED4Q96RK1 184 aa10.85□□□□□ -0.67
UBE2B-204ENST00000504431 MARK1Q9P0L2 795 aa10.85□□□□□ -0.67
UBE2B-204ENST00000504431 DCTN4Q9UJW0 460 aa10.85□□□□□ -0.67
UBE2B-204ENST00000504431 CLTCL1P53675 1640 aa10.84□□□□□ -0.67
UBE2B-204ENST00000504431 ZBTB39O15060 712 aa10.84□□□□□ -0.67
UBE2B-204ENST00000504431 CCDC27Q2M243 656 aa10.84□□□□□ -0.67
UBE2B-204ENST00000504431 FAM26DQ5JW98 314 aa10.84□□□□□ -0.67
UBE2B-204ENST00000504431 IRF7Q92985 503 aa10.84□□□□□ -0.67
UBE2B-204ENST00000504431 ABHD17AQ96GS6 310 aa10.84□□□□□ -0.67
UBE2B-204ENST00000504431 NSFL1CQ9UNZ2 370 aaKnown RBP10.84□□□□□ -0.67
UBE2B-204ENST00000504431 PTPRTO14522 1441 aa10.84□□□□□ -0.67
UBE2B-204ENST00000504431 OPLAHO14841 1288 aa10.83□□□□□ -0.68
UBE2B-204ENST00000504431 FGFR3P22607 806 aa10.83□□□□□ -0.68
UBE2B-204ENST00000504431 VEGFBP49765 207 aa10.83□□□□□ -0.68
UBE2B-204ENST00000504431 EHHADHQ08426 723 aa10.83□□□□□ -0.68
UBE2B-204ENST00000504431 ECM1Q16610 540 aa10.83□□□□□ -0.68
UBE2B-204ENST00000504431 ZNF326Q5BKZ1 582 aaKnown RBP10.83□□□□□ -0.68
UBE2B-204ENST00000504431 FAM182BQ5T319 152 aa10.83□□□□□ -0.68
UBE2B-204ENST00000504431 RGL4Q8IZJ4 473 aa10.83□□□□□ -0.68
UBE2B-204ENST00000504431 GPR152Q8TDT2 470 aa10.83□□□□□ -0.68
UBE2B-204ENST00000504431 EDEM1Q92611 657 aa10.83□□□□□ -0.68
UBE2B-204ENST00000504431 EFCC1Q9HA90 598 aa10.83□□□□□ -0.68
UBE2B-204ENST00000504431 RTCBQ9Y3I0 505 aaKnown RBP10.83□□□□□ -0.68
UBE2B-204ENST00000504431 TMEM131LA2VDJ0 1609 aa10.83□□□□□ -0.68
UBE2B-204ENST00000504431 NEURL4Q96JN8 1562 aa10.82□□□□□ -0.68
UBE2B-204ENST00000504431 TMEM2Q9UHN6 1383 aa10.82□□□□□ -0.68
UBE2B-204ENST00000504431 POLR1AO95602 1720 aaPredicted RBP10.82□□□□□ -0.68
UBE2B-204ENST00000504431 DNM1Q05193 864 aaKnown RBP10.82□□□□□ -0.68
UBE2B-204ENST00000504431 PDE3BQ13370 1112 aa10.82□□□□□ -0.68
UBE2B-204ENST00000504431 NEUROD1Q13562 356 aa10.82□□□□□ -0.68
UBE2B-204ENST00000504431 RGL3Q3MIN7 710 aa10.82□□□□□ -0.68
UBE2B-204ENST00000504431 ATCAYQ86WG3 371 aa10.82□□□□□ -0.68
UBE2B-204ENST00000504431 ADGRB3O60242 1522 aa10.82□□□□□ -0.68
UBE2B-204ENST00000504431 FZD6O60353 706 aa10.81□□□□□ -0.68
UBE2B-204ENST00000504431 PDGFAP04085 211 aa10.81□□□□□ -0.68
UBE2B-204ENST00000504431 MAPK1P28482 360 aa10.81□□□□□ -0.68
UBE2B-204ENST00000504431 MARSP56192 900 aaKnown RBP10.81□□□□□ -0.68
UBE2B-204ENST00000504431 ZSCAN29Q8IWY8 852 aaPredicted RBP10.81□□□□□ -0.68
UBE2B-204ENST00000504431 CMTR1Q8N1G2 835 aaKnown RBP10.81□□□□□ -0.68
UBE2B-204ENST00000504431 SLC26A8Q96RN1 970 aa10.81□□□□□ -0.68
UBE2B-204ENST00000504431 EID1Q9Y6B2 187 aa10.81□□□□□ -0.68
UBE2B-204ENST00000504431 ZNF335Q9H4Z2 1342 aaPredicted RBP10.81□□□□□ -0.68
UBE2B-204ENST00000504431 TRPM2O94759 1503 aa10.8□□□□□ -0.68
UBE2B-204ENST00000504431 GPR25O00155 361 aa10.8□□□□□ -0.68
UBE2B-204ENST00000504431 NUDT16Q96DE0 195 aaKnown RBP10.8□□□□□ -0.68
UBE2B-204ENST00000504431 POLIQ9UNA4 740 aa10.8□□□□□ -0.68
UBE2B-204ENST00000504431 RIMS2Q9UQ26 1411 aa10.8□□□□□ -0.68
UBE2B-204ENST00000504431 KIF1BO60333 1816 aa10.79□□□□□ -0.68
UBE2B-204ENST00000504431 NPHP4O75161 1426 aaPredicted RBP10.79□□□□□ -0.68
UBE2B-204ENST00000504431 SFSWAPQ12872 951 aaKnown RBP10.79□□□□□ -0.68
UBE2B-204ENST00000504431 RBCK1Q9BYM8 510 aa10.79□□□□□ -0.68
UBE2B-204ENST00000504431 SCAF11Q99590 1463 aaKnown RBP10.79□□□□□ -0.68
UBE2B-204ENST00000504431 ARHGAP23Q9P227 1491 aa10.79□□□□□ -0.68
UBE2B-204ENST00000504431 SLIT1O75093 1534 aa10.79□□□□□ -0.68
UBE2B-204ENST00000504431 EGFRP00533 1210 aa10.78□□□□□ -0.68
UBE2B-204ENST00000504431 MX2P20592 715 aa10.78□□□□□ -0.68
UBE2B-204ENST00000504431 NFX1Q12986 1120 aaKnown RBP10.78□□□□□ -0.68
UBE2B-204ENST00000504431 CCINQ13939 588 aa10.78□□□□□ -0.68
UBE2B-204ENST00000504431 PNMA5Q96PV4 448 aa10.78□□□□□ -0.68
UBE2B-204ENST00000504431 MBIPQ9NS73 344 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms