RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 SLC9A9Q8IVB4 645 aa6.54□□□□□ -1.36
NIPBL-204ENST00000504430 MYO1HQ8N1T3 1032 aa6.54□□□□□ -1.36
NIPBL-204ENST00000504430 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.54□□□□□ -1.36
NIPBL-204ENST00000504430 ZNF296Q8WUU4 475 aaPredicted RBP6.54□□□□□ -1.36
NIPBL-204ENST00000504430 UNC93B1Q9H1C4 597 aa6.54□□□□□ -1.36
NIPBL-204ENST00000504430 ETNK1Q9HBU6 452 aa6.54□□□□□ -1.36
NIPBL-204ENST00000504430 PTCH2Q9Y6C5 1203 aa6.54□□□□□ -1.36
NIPBL-204ENST00000504430 MKL1Q969V6 931 aa6.54□□□□□ -1.36
NIPBL-204ENST00000504430 AXIN2Q9Y2T1 843 aa6.54□□□□□ -1.36
NIPBL-204ENST00000504430 ZBED6P86452 979 aa6.53□□□□□ -1.36
NIPBL-204ENST00000504430 FAM83BQ5T0W9 1011 aa6.53□□□□□ -1.36
NIPBL-204ENST00000504430 ALKBH2Q6NS38 261 aa6.53□□□□□ -1.36
NIPBL-204ENST00000504430 LHFPL2Q6ZUX7 228 aa6.53□□□□□ -1.36
NIPBL-204ENST00000504430 CCDC74AQ96AQ1 378 aa6.53□□□□□ -1.36
NIPBL-204ENST00000504430 HCN4Q9Y3Q4 1203 aa6.53□□□□□ -1.36
NIPBL-204ENST00000504430 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.53□□□□□ -1.36
NIPBL-204ENST00000504430 HIP1RO75146 1068 aa6.53□□□□□ -1.36
NIPBL-204ENST00000504430 SEC16BQ96JE7 1060 aa6.53□□□□□ -1.36
NIPBL-204ENST00000504430 ZBED2Q9BTP6 218 aa6.53□□□□□ -1.36
NIPBL-204ENST00000504430 LUZP4Q9P127 313 aa6.53□□□□□ -1.36
NIPBL-204ENST00000504430 AKAP10O43572 662 aa6.53□□□□□ -1.36
NIPBL-204ENST00000504430 EPB42P16452 691 aa6.53□□□□□ -1.36
NIPBL-204ENST00000504430 EIF4A3P38919 411 aaKnown RBP6.53□□□□□ -1.36
NIPBL-204ENST00000504430 VPS72Q15906 364 aa6.53□□□□□ -1.36
NIPBL-204ENST00000504430 TMEM95Q3KNT9 176 aa6.53□□□□□ -1.36
NIPBL-204ENST00000504430 ALDH1L2Q3SY69 923 aa6.53□□□□□ -1.36
NIPBL-204ENST00000504430 MTERF2Q49AM1 385 aa6.53□□□□□ -1.36
NIPBL-204ENST00000504430 ACBD5Q5T8D3 534 aaPredicted RBP6.53□□□□□ -1.36
NIPBL-204ENST00000504430 MPNDQ8N594 471 aa6.53□□□□□ -1.36
NIPBL-204ENST00000504430 FBF1Q8TES7 1133 aa6.53□□□□□ -1.36
NIPBL-204ENST00000504430 THAP11Q96EK4 314 aa6.53□□□□□ -1.36
NIPBL-204ENST00000504430 DNAJC25Q9H1X3 360 aa6.53□□□□□ -1.36
NIPBL-204ENST00000504430 NFKB2Q00653 900 aa6.52□□□□□ -1.37
NIPBL-204ENST00000504430 SH3RF1Q7Z6J0 888 aa6.52□□□□□ -1.37
NIPBL-204ENST00000504430 TRPM4Q8TD43 1214 aa6.52□□□□□ -1.37
NIPBL-204ENST00000504430 PPM1EQ8WY54 764 aa6.52□□□□□ -1.37
NIPBL-204ENST00000504430 ALDH8A1Q9H2A2 487 aaPredicted RBP6.52□□□□□ -1.37
NIPBL-204ENST00000504430 NBNO60934 754 aa6.52□□□□□ -1.37
NIPBL-204ENST00000504430 DUSP27Q5VZP5 1158 aa6.52□□□□□ -1.37
NIPBL-204ENST00000504430 THNSL2Q86YJ6 484 aa6.52□□□□□ -1.37
NIPBL-204ENST00000504430 SLC10A4Q96EP9 437 aa6.52□□□□□ -1.37
NIPBL-204ENST00000504430 SHDQ96IW2 340 aa6.52□□□□□ -1.37
NIPBL-204ENST00000504430 RTFDC1Q9BY42 306 aaPredicted RBP6.52□□□□□ -1.37
NIPBL-204ENST00000504430 TMPRSS4Q9NRS4 437 aa6.52□□□□□ -1.37
NIPBL-204ENST00000504430 PCDH10Q9P2E7 1040 aa6.52□□□□□ -1.37
NIPBL-204ENST00000504430 WASHC2CQ9Y4E1 1318 aa6.52□□□□□ -1.37
NIPBL-204ENST00000504430 LMNB1P20700 586 aa6.52□□□□□ -1.37
NIPBL-204ENST00000504430 SERPINB3P29508 390 aa6.52□□□□□ -1.37
NIPBL-204ENST00000504430 HDAC1Q13547 482 aaPredicted RBP6.52□□□□□ -1.37
NIPBL-204ENST00000504430 DDR2Q16832 855 aa6.52□□□□□ -1.37
NIPBL-204ENST00000504430 CT47A1Q5JQC4 288 aaPredicted RBP6.52□□□□□ -1.37
NIPBL-204ENST00000504430 C1orf53Q5VUE5 145 aa6.52□□□□□ -1.37
NIPBL-204ENST00000504430 DDX46Q7L014 1031 aaKnown RBP6.52□□□□□ -1.37
NIPBL-204ENST00000504430 DRC7Q8IY82 874 aa6.52□□□□□ -1.37
NIPBL-204ENST00000504430 RUNDC1Q96C34 613 aa6.52□□□□□ -1.37
NIPBL-204ENST00000504430 ANKIB1Q9P2G1 1089 aa6.52□□□□□ -1.37
NIPBL-204ENST00000504430 KDM2BQ8NHM5 1336 aa6.51□□□□□ -1.37
NIPBL-204ENST00000504430 TLR3O15455 904 aaKnown RBP6.51□□□□□ -1.37
NIPBL-204ENST00000504430 PDPK1O15530 556 aa6.51□□□□□ -1.37
NIPBL-204ENST00000504430 HOXB3P14651 431 aaPredicted RBP6.51□□□□□ -1.37
NIPBL-204ENST00000504430 HDGFP51858 240 aaKnown RBP6.51□□□□□ -1.37
NIPBL-204ENST00000504430 ZRSR2Q15696 482 aaKnown RBP6.51□□□□□ -1.37
NIPBL-204ENST00000504430 STRA8Q7Z7C7 330 aa6.51□□□□□ -1.37
NIPBL-204ENST00000504430 SPICE1Q8N0Z3 855 aa6.51□□□□□ -1.37
NIPBL-204ENST00000504430 FAM160A2Q8N612 972 aaPredicted RBP6.51□□□□□ -1.37
NIPBL-204ENST00000504430 PRKAG3Q9UGI9 489 aa6.51□□□□□ -1.37
NIPBL-204ENST00000504430 MSRB2Q9Y3D2 182 aa6.51□□□□□ -1.37
NIPBL-204ENST00000504430 PGRP06401 933 aa6.51□□□□□ -1.37
NIPBL-204ENST00000504430 CCDC174Q6PII3 467 aa6.51□□□□□ -1.37
NIPBL-204ENST00000504430 FBXO27Q8NI29 283 aa6.51□□□□□ -1.37
NIPBL-204ENST00000504430 BAP1Q92560 729 aa6.51□□□□□ -1.37
NIPBL-204ENST00000504430 TSPAN18Q96SJ8 248 aa6.51□□□□□ -1.37
NIPBL-204ENST00000504430 BCO2Q9BYV7 579 aa6.51□□□□□ -1.37
NIPBL-204ENST00000504430 SALL2Q9Y467 1007 aaPredicted RBP6.51□□□□□ -1.37
NIPBL-204ENST00000504430 KCNQ2O43526 872 aa6.51□□□□□ -1.37
NIPBL-204ENST00000504430 ST13P50502 369 aaKnown RBP6.51□□□□□ -1.37
NIPBL-204ENST00000504430 ESCO1Q5FWF5 840 aa6.51□□□□□ -1.37
NIPBL-204ENST00000504430 ARSHQ5FYA8 562 aa6.51□□□□□ -1.37
NIPBL-204ENST00000504430 NELL1Q92832 810 aa6.51□□□□□ -1.37
NIPBL-204ENST00000504430 MTMR8Q96EF0 704 aa6.51□□□□□ -1.37
NIPBL-204ENST00000504430 ASPSCR1Q9BZE9 553 aa6.51□□□□□ -1.37
NIPBL-204ENST00000504430 PDE8AO60658 829 aa6.5□□□□□ -1.37
NIPBL-204ENST00000504430 GUCY2FP51841 1108 aa6.5□□□□□ -1.37
NIPBL-204ENST00000504430 IFRD2Q12894 506 aaPredicted RBP6.5□□□□□ -1.37
NIPBL-204ENST00000504430 CCDC85BQ15834 202 aaPredicted RBP6.5□□□□□ -1.37
NIPBL-204ENST00000504430 L1TD1Q5T7N2 865 aaKnown RBP6.5□□□□□ -1.37
NIPBL-204ENST00000504430 JPH3Q8WXH2 748 aaPredicted RBP6.5□□□□□ -1.37
NIPBL-204ENST00000504430 ERP27Q96DN0 273 aa6.5□□□□□ -1.37
NIPBL-204ENST00000504430 OSBPL3Q9H4L5 887 aa6.5□□□□□ -1.37
NIPBL-204ENST00000504430 CPNE3O75131 537 aaKnown RBP6.5□□□□□ -1.37
NIPBL-204ENST00000504430 MAN1A1P33908 653 aa6.5□□□□□ -1.37
NIPBL-204ENST00000504430 CLIC5Q9NZA1 410 aa6.5□□□□□ -1.37
NIPBL-204ENST00000504430 M0R2N6 131 aa6.49□□□□□ -1.37
NIPBL-204ENST00000504430 MTMR1Q13613 665 aa6.49□□□□□ -1.37
NIPBL-204ENST00000504430 PPP2R5EQ16537 467 aa6.49□□□□□ -1.37
NIPBL-204ENST00000504430 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.49□□□□□ -1.37
NIPBL-204ENST00000504430 DGKHQ86XP1 1220 aa6.49□□□□□ -1.37
NIPBL-204ENST00000504430 EVLQ9UI08 416 aaPredicted RBP6.49□□□□□ -1.37
NIPBL-204ENST00000504430 PPP2R3BQ9Y5P8 575 aa6.49□□□□□ -1.37
NIPBL-204ENST00000504430 A6NJY4 79 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms