RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 COA1Q9GZY4 146 aa17.75■□□□□ 0.43
PDLIM7-211ENST00000504318 USP17L3A6NCW0 530 aa17.74■□□□□ 0.43
PDLIM7-211ENST00000504318 USP17L4A6NCW7 530 aa17.74■□□□□ 0.43
PDLIM7-211ENST00000504318 IFIT5Q13325 482 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-211ENST00000504318 KIF4BQ2VIQ3 1234 aa17.74■□□□□ 0.43
PDLIM7-211ENST00000504318 DEFB115Q30KQ5 88 aa17.74■□□□□ 0.43
PDLIM7-211ENST00000504318 IFFO2Q5TF58 517 aa17.74■□□□□ 0.43
PDLIM7-211ENST00000504318 CDC37L1Q7L3B6 337 aa17.74■□□□□ 0.43
PDLIM7-211ENST00000504318 USP17L1Q7RTZ2 530 aa17.74■□□□□ 0.43
PDLIM7-211ENST00000504318 SAPCD2Q86UD0 394 aa17.74■□□□□ 0.43
PDLIM7-211ENST00000504318 ANKRD44Q8N8A2 993 aa17.74■□□□□ 0.43
PDLIM7-211ENST00000504318 ZNF594Q96JF6 807 aaPredicted RBP17.74■□□□□ 0.43
PDLIM7-211ENST00000504318 MPHOSPH8Q99549 860 aa17.74■□□□□ 0.43
PDLIM7-211ENST00000504318 MXD3Q9BW11 206 aa17.74■□□□□ 0.43
PDLIM7-211ENST00000504318 ANKRD2Q9GZV1 360 aa17.74■□□□□ 0.43
PDLIM7-211ENST00000504318 BRPF1P55201 1214 aaPredicted RBP17.73■□□□□ 0.43
PDLIM7-211ENST00000504318 WDR33Q9C0J8 1336 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-211ENST00000504318 TAF5LO75529 589 aa17.72■□□□□ 0.43
PDLIM7-211ENST00000504318 CELF2O95319 508 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-211ENST00000504318 STRIP1Q5VSL9 837 aa17.72■□□□□ 0.43
PDLIM7-211ENST00000504318 USP48Q86UV5 1035 aa17.72■□□□□ 0.43
PDLIM7-211ENST00000504318 USP44Q9H0E7 712 aa17.72■□□□□ 0.43
PDLIM7-211ENST00000504318 WBP1LQ9NX94 342 aa17.72■□□□□ 0.43
PDLIM7-211ENST00000504318 C9orf78Q9NZ63 289 aaPredicted RBP17.72■□□□□ 0.43
PDLIM7-211ENST00000504318 ADM5C9JUS6 153 aa17.71■□□□□ 0.43
PDLIM7-211ENST00000504318 HELBQ8NG08 1087 aaPredicted RBP17.71■□□□□ 0.43
PDLIM7-211ENST00000504318 HHIPL1Q96JK4 782 aa17.71■□□□□ 0.43
PDLIM7-211ENST00000504318 BICC1Q9H694 974 aaKnown RBP17.71■□□□□ 0.43
PDLIM7-211ENST00000504318 ABT1Q9ULW3 272 aaKnown RBP17.71■□□□□ 0.43
PDLIM7-211ENST00000504318 FOXN1O15353 648 aa17.7■□□□□ 0.42
PDLIM7-211ENST00000504318 CT47B1P0C2W7 299 aaPredicted RBP17.7■□□□□ 0.42
PDLIM7-211ENST00000504318 USP17L8P0C7I0 530 aa17.7■□□□□ 0.42
PDLIM7-211ENST00000504318 RBM26Q5T8P6 1007 aaKnown RBP17.7■□□□□ 0.42
PDLIM7-211ENST00000504318 CYP4F22Q6NT55 531 aa17.7■□□□□ 0.42
PDLIM7-211ENST00000504318 ZBED3Q96IU2 234 aaPredicted RBP17.7■□□□□ 0.42
PDLIM7-211ENST00000504318 PUS3Q9BZE2 481 aaKnown RBP17.7■□□□□ 0.42
PDLIM7-211ENST00000504318 CD209Q9NNX6 404 aa17.7■□□□□ 0.42
PDLIM7-211ENST00000504318 MYOZ2Q9NPC6 264 aa17.7■□□□□ 0.42
PDLIM7-211ENST00000504318 GGA3Q9NZ52 723 aa17.7■□□□□ 0.42
PDLIM7-211ENST00000504318 G3V3G9 751 aa17.69■□□□□ 0.42
PDLIM7-211ENST00000504318 DCAF8Q5TAQ9 597 aa17.69■□□□□ 0.42
PDLIM7-211ENST00000504318 KRT26Q7Z3Y9 468 aa17.69■□□□□ 0.42
PDLIM7-211ENST00000504318 CERS5Q8N5B7 392 aa17.69■□□□□ 0.42
PDLIM7-211ENST00000504318 CAPNS2Q96L46 248 aa17.69■□□□□ 0.42
PDLIM7-211ENST00000504318 CHMP3Q9Y3E7 222 aa17.69■□□□□ 0.42
PDLIM7-211ENST00000504318 RIPOR2Q9Y4F9 1068 aa17.69■□□□□ 0.42
PDLIM7-211ENST00000504318 IL1R1P14778 569 aa17.68■□□□□ 0.42
PDLIM7-211ENST00000504318 SCARF1Q14162 830 aa17.68■□□□□ 0.42
PDLIM7-211ENST00000504318 CCDC57Q2TAC2 916 aa17.68■□□□□ 0.42
PDLIM7-211ENST00000504318 LDHAL6AQ6ZMR3 332 aa17.68■□□□□ 0.42
PDLIM7-211ENST00000504318 VGLL2Q8N8G2 317 aa17.68■□□□□ 0.42
PDLIM7-211ENST00000504318 ARAP2Q8WZ64 1704 aa17.68■□□□□ 0.42
PDLIM7-211ENST00000504318 PITPNM2Q9BZ72 1349 aa17.68■□□□□ 0.42
PDLIM7-211ENST00000504318 RFX5P48382 616 aaPredicted RBP17.67■□□□□ 0.42
PDLIM7-211ENST00000504318 ECM29Q5VYK3 1845 aa17.67■□□□□ 0.42
PDLIM7-211ENST00000504318 MYO3BQ8WXR4 1341 aa17.67■□□□□ 0.42
PDLIM7-211ENST00000504318 RARSP54136 660 aaKnown RBP17.66■□□□□ 0.42
PDLIM7-211ENST00000504318 NBPF9Q3BBW0 867 aa17.66■□□□□ 0.42
PDLIM7-211ENST00000504318 ANGEL2Q5VTE6 544 aaKnown RBP17.66■□□□□ 0.42
PDLIM7-211ENST00000504318 TTLL5Q6EMB2 1281 aa17.66■□□□□ 0.42
PDLIM7-211ENST00000504318 MIER1Q8N108 512 aa17.66■□□□□ 0.42
PDLIM7-211ENST00000504318 DCPSQ96C86 337 aaKnown RBP17.66■□□□□ 0.42
PDLIM7-211ENST00000504318 SMC4Q9NTJ3 1288 aa17.66■□□□□ 0.42
PDLIM7-211ENST00000504318 WNT10BO00744 389 aa17.65■□□□□ 0.42
PDLIM7-211ENST00000504318 GTF2IP78347 998 aa17.65■□□□□ 0.42
PDLIM7-211ENST00000504318 LRRC24Q50LG9 513 aa17.65■□□□□ 0.42
PDLIM7-211ENST00000504318 ZNF408Q9H9D4 720 aa17.65■□□□□ 0.42
PDLIM7-211ENST00000504318 NOB1Q9ULX3 412 aaKnown RBP17.65■□□□□ 0.42
PDLIM7-211ENST00000504318 PAPPA2Q9BXP8 1791 aa17.64■□□□□ 0.41
PDLIM7-211ENST00000504318 FAM155AB1AL88 458 aaPredicted RBP17.64■□□□□ 0.41
PDLIM7-211ENST00000504318 AOC2O75106 756 aa17.64■□□□□ 0.41
PDLIM7-211ENST00000504318 UBE4AQ14139 1066 aa17.64■□□□□ 0.41
PDLIM7-211ENST00000504318 DIEXFQ68CQ4 756 aaKnown RBP17.64■□□□□ 0.41
PDLIM7-211ENST00000504318 KLHDC4Q8TBB5 520 aa17.64■□□□□ 0.41
PDLIM7-211ENST00000504318 CDCA5Q96FF9 252 aa17.64■□□□□ 0.41
PDLIM7-211ENST00000504318 ZIC5Q96T25 663 aa17.64■□□□□ 0.41
PDLIM7-211ENST00000504318 CNNM1Q9NRU3 951 aa17.64■□□□□ 0.41
PDLIM7-211ENST00000504318 SCAF8Q9UPN6 1271 aaKnown RBP17.64■□□□□ 0.41
PDLIM7-211ENST00000504318 HSPA8P11142 646 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-211ENST00000504318 ECE1P42892 770 aa17.63■□□□□ 0.41
PDLIM7-211ENST00000504318 KCNJ4P48050 445 aa17.63■□□□□ 0.41
PDLIM7-211ENST00000504318 MMP14P50281 582 aa17.63■□□□□ 0.41
PDLIM7-211ENST00000504318 FKBP1AP62942 108 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-211ENST00000504318 FAM84BQ96KN1 310 aaPredicted RBP17.63■□□□□ 0.41
PDLIM7-211ENST00000504318 GBA2Q9HCG7 927 aaPredicted RBP17.63■□□□□ 0.41
PDLIM7-211ENST00000504318 MAP2K2P36507 400 aa17.62■□□□□ 0.41
PDLIM7-211ENST00000504318 KIAA0825Q8IV33 1275 aa17.62■□□□□ 0.41
PDLIM7-211ENST00000504318 SULF1Q8IWU6 871 aa17.62■□□□□ 0.41
PDLIM7-211ENST00000504318 TDRD7Q8NHU6 1098 aaKnown RBP17.62■□□□□ 0.41
PDLIM7-211ENST00000504318 PCDHAC2Q9Y5I4 1007 aa17.62■□□□□ 0.41
PDLIM7-211ENST00000504318 AOX1Q06278 1338 aa17.62■□□□□ 0.41
PDLIM7-211ENST00000504318 FAM205AQ6ZU69 1335 aa17.62■□□□□ 0.41
PDLIM7-211ENST00000504318 PLIN1O60240 522 aa17.61■□□□□ 0.41
PDLIM7-211ENST00000504318 HUNKP57058 714 aa17.61■□□□□ 0.41
PDLIM7-211ENST00000504318 MAP2K1Q02750 393 aaPredicted RBP17.61■□□□□ 0.41
PDLIM7-211ENST00000504318 PTPN12Q05209 780 aaKnown RBP17.61■□□□□ 0.41
PDLIM7-211ENST00000504318 TAF7LQ5H9L4 462 aa17.61■□□□□ 0.41
PDLIM7-211ENST00000504318 ZNF804AQ7Z570 1209 aa17.61■□□□□ 0.41
PDLIM7-211ENST00000504318 MTMR14Q8NCE2 650 aa17.61■□□□□ 0.41
PDLIM7-211ENST00000504318 FBXW7Q969H0 707 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms