RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 SUV39H2Q9H5I1 410 aa9.07□□□□□ -0.96
COPS4-203ENST00000504274 FAM181BA6NEQ2 426 aa9.06□□□□□ -0.96
COPS4-203ENST00000504274 BAG6P46379 1132 aa9.06□□□□□ -0.96
COPS4-203ENST00000504274 MKL2Q9ULH7 1088 aa9.06□□□□□ -0.96
COPS4-203ENST00000504274 ILDR2Q71H61 639 aa9.05□□□□□ -0.96
COPS4-203ENST00000504274 BEND7Q8N7W2 519 aaPredicted RBP9.05□□□□□ -0.96
COPS4-203ENST00000504274 NXPE3Q969Y0 559 aa9.05□□□□□ -0.96
COPS4-203ENST00000504274 LACRTQ9GZZ8 138 aa9.05□□□□□ -0.96
COPS4-203ENST00000504274 PDE2AO00408 941 aaPredicted RBP9.04□□□□□ -0.96
COPS4-203ENST00000504274 GNB5O14775 395 aa9.04□□□□□ -0.96
COPS4-203ENST00000504274 SMNDC1O75940 238 aaKnown RBP eCLIP9.04□□□□□ -0.96
COPS4-203ENST00000504274 PODNQ7Z5L7 613 aa9.04□□□□□ -0.96
COPS4-203ENST00000504274 TMEM102Q8N9M5 508 aaPredicted RBP9.04□□□□□ -0.96
COPS4-203ENST00000504274 PLVAPQ9BX97 442 aa9.04□□□□□ -0.96
COPS4-203ENST00000504274 METTL12A8MUP2 240 aa9.03□□□□□ -0.96
COPS4-203ENST00000504274 TAGLNQ01995 201 aaKnown RBP9.03□□□□□ -0.96
COPS4-203ENST00000504274 KIAA0319Q5VV43 1072 aa9.03□□□□□ -0.96
COPS4-203ENST00000504274 DMRTC2Q8IXT2 367 aaPredicted RBP9.03□□□□□ -0.96
COPS4-203ENST00000504274 IL22RA1Q8N6P7 574 aa9.03□□□□□ -0.96
COPS4-203ENST00000504274 SCARF2Q96GP6 870 aaPredicted RBP9.03□□□□□ -0.96
COPS4-203ENST00000504274 TCF12Q99081 682 aa9.03□□□□□ -0.96
COPS4-203ENST00000504274 SH2B1Q9NRF2 756 aaPredicted RBP9.03□□□□□ -0.96
COPS4-203ENST00000504274 RNF19AQ9NV58 838 aa9.03□□□□□ -0.96
COPS4-203ENST00000504274 LDHBP07195 334 aaKnown RBP9.02□□□□□ -0.97
COPS4-203ENST00000504274 COL8A1P27658 744 aa9.02□□□□□ -0.97
COPS4-203ENST00000504274 COL19A1Q14993 1142 aa9.02□□□□□ -0.97
COPS4-203ENST00000504274 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.02□□□□□ -0.97
COPS4-203ENST00000504274 MSL1Q68DK7 614 aa9.02□□□□□ -0.97
COPS4-203ENST00000504274 FBXO33Q7Z6M2 555 aa9.02□□□□□ -0.97
COPS4-203ENST00000504274 LIN7BQ9HAP6 207 aa9.02□□□□□ -0.97
COPS4-203ENST00000504274 FAM229AH3BQW9 127 aa9.01□□□□□ -0.97
COPS4-203ENST00000504274 GADD45BO75293 160 aaPredicted RBP9.01□□□□□ -0.97
COPS4-203ENST00000504274 EAPPQ56P03 285 aaPredicted RBP9.01□□□□□ -0.97
COPS4-203ENST00000504274 WFDC8Q8IUA0 241 aa9.01□□□□□ -0.97
COPS4-203ENST00000504274 BHLHE41Q9C0J9 482 aaPredicted RBP9.01□□□□□ -0.97
COPS4-203ENST00000504274 GRIA4P48058 902 aa9□□□□□ -0.97
COPS4-203ENST00000504274 GRM2Q14416 872 aa9□□□□□ -0.97
COPS4-203ENST00000504274 SPRED3Q2MJR0 410 aa9□□□□□ -0.97
COPS4-203ENST00000504274 TRAPPC3LQ5T215 181 aa9□□□□□ -0.97
COPS4-203ENST00000504274 CCNJLQ8IV13 435 aa9□□□□□ -0.97
COPS4-203ENST00000504274 ADAM19Q9H013 955 aa9□□□□□ -0.97
COPS4-203ENST00000504274 EHD4Q9H223 541 aa9□□□□□ -0.97
COPS4-203ENST00000504274 PTPRAP18433 802 aa8.99□□□□□ -0.97
COPS4-203ENST00000504274 EPHA1P21709 976 aa8.99□□□□□ -0.97
COPS4-203ENST00000504274 CDC27P30260 824 aa8.99□□□□□ -0.97
COPS4-203ENST00000504274 CDC25BP30305 580 aa8.99□□□□□ -0.97
COPS4-203ENST00000504274 GSK3AP49840 483 aa8.99□□□□□ -0.97
COPS4-203ENST00000504274 ALG1LQ6GMV1 187 aa8.99□□□□□ -0.97
COPS4-203ENST00000504274 TXNDC11Q6PKC3 985 aa8.99□□□□□ -0.97
COPS4-203ENST00000504274 GLIS3Q8NEA6 775 aa8.99□□□□□ -0.97
COPS4-203ENST00000504274 ASAP3Q8TDY4 903 aa8.99□□□□□ -0.97
COPS4-203ENST00000504274 SOX13Q9UN79 622 aa8.99□□□□□ -0.97
COPS4-203ENST00000504274 A0A0A0MRY4 1105 aa8.98□□□□□ -0.97
COPS4-203ENST00000504274 LINC01387J3KSC0 135 aa8.98□□□□□ -0.97
COPS4-203ENST00000504274 ERCC3P19447 782 aa8.98□□□□□ -0.97
COPS4-203ENST00000504274 ATP2B2Q01814 1243 aa8.98□□□□□ -0.97
COPS4-203ENST00000504274 FBF1Q8TES7 1133 aa8.98□□□□□ -0.97
COPS4-203ENST00000504274 MUC3BQ9H195 1237 aa8.98□□□□□ -0.97
COPS4-203ENST00000504274 NLRP2Q9NX02 1062 aa8.98□□□□□ -0.97
COPS4-203ENST00000504274 DEAF1O75398 565 aaPredicted RBP8.97□□□□□ -0.97
COPS4-203ENST00000504274 NXPE4Q6UWF7 544 aa8.97□□□□□ -0.97
COPS4-203ENST00000504274 VN1R5Q7Z5H4 357 aa8.97□□□□□ -0.97
COPS4-203ENST00000504274 DUSP9Q99956 384 aaKnown RBP8.97□□□□□ -0.97
COPS4-203ENST00000504274 BCO2Q9BYV7 579 aa8.97□□□□□ -0.97
COPS4-203ENST00000504274 OSBPL7Q9BZF2 842 aa8.97□□□□□ -0.97
COPS4-203ENST00000504274 ABCB6Q9NP58 842 aa8.97□□□□□ -0.97
COPS4-203ENST00000504274 A0A096LPE4 126 aa8.96□□□□□ -0.98
COPS4-203ENST00000504274 A0A1W2PPZ6 126 aa8.96□□□□□ -0.98
COPS4-203ENST00000504274 PIK3R2O00459 728 aa8.96□□□□□ -0.98
COPS4-203ENST00000504274 PRPF40AO75400 957 aaKnown RBP8.96□□□□□ -0.98
COPS4-203ENST00000504274 HGSNATQ68CP4 663 aa8.96□□□□□ -0.98
COPS4-203ENST00000504274 BSNDQ8WZ55 320 aa8.96□□□□□ -0.98
COPS4-203ENST00000504274 PPME1Q9Y570 386 aa8.96□□□□□ -0.98
COPS4-203ENST00000504274 SETDB1Q15047 1291 aa8.95□□□□□ -0.98
COPS4-203ENST00000504274 PRPF40BQ6NWY9 871 aaKnown RBP8.95□□□□□ -0.98
COPS4-203ENST00000504274 CACTIN-AS1Q8N1I8 211 aa8.95□□□□□ -0.98
COPS4-203ENST00000504274 PODXL2Q9NZ53 605 aa8.95□□□□□ -0.98
COPS4-203ENST00000504274 NOP53Q9NZM5 478 aaKnown RBP8.95□□□□□ -0.98
COPS4-203ENST00000504274 TMEM238LA0A1B0GVL6 79 aa8.94□□□□□ -0.98
COPS4-203ENST00000504274 TM4SF5O14894 197 aa8.94□□□□□ -0.98
COPS4-203ENST00000504274 KCNMA1Q12791 1236 aa8.94□□□□□ -0.98
COPS4-203ENST00000504274 TRIM28Q13263 835 aaKnown RBP8.94□□□□□ -0.98
COPS4-203ENST00000504274 FMR1NBQ8N0W7 255 aaPredicted RBP8.94□□□□□ -0.98
COPS4-203ENST00000504274 RGS22Q8NE09 1264 aa8.94□□□□□ -0.98
COPS4-203ENST00000504274 BCL2L13Q9BXK5 485 aa8.94□□□□□ -0.98
COPS4-203ENST00000504274 PARP2Q9UGN5 583 aa8.94□□□□□ -0.98
COPS4-203ENST00000504274 GRIK4Q16099 956 aa8.93□□□□□ -0.98
COPS4-203ENST00000504274 GALNT11Q8NCW6 608 aa8.93□□□□□ -0.98
COPS4-203ENST00000504274 FAM161BQ96MY7 647 aa8.93□□□□□ -0.98
COPS4-203ENST00000504274 CARD10Q9BWT7 1032 aa8.93□□□□□ -0.98
COPS4-203ENST00000504274 TRAK1Q9UPV9 953 aa8.93□□□□□ -0.98
COPS4-203ENST00000504274 SPDYE3A6NKU9 549 aa8.92□□□□□ -0.98
COPS4-203ENST00000504274 H3BRJ5 948 aa8.92□□□□□ -0.98
COPS4-203ENST00000504274 RNF225M0QZC1 329 aaPredicted RBP8.92□□□□□ -0.98
COPS4-203ENST00000504274 ITPKAP23677 461 aa8.92□□□□□ -0.98
COPS4-203ENST00000504274 FCGRTP55899 365 aa8.92□□□□□ -0.98
COPS4-203ENST00000504274 RAC1P63000 192 aa8.92□□□□□ -0.98
COPS4-203ENST00000504274 RASSF7Q02833 373 aa8.92□□□□□ -0.98
COPS4-203ENST00000504274 FBXO11Q86XK2 927 aa8.92□□□□□ -0.98
COPS4-203ENST00000504274 GIPC2Q8TF65 315 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms