RNA–Protein interactions for RNA: ENST00000504208.5

KLHL3-204, Transcript of kelch like family member 3, humanhuman

TSL 2

Gene KLHL3, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-204ENST00000504208 HMGB1P09429 215 aaKnown RBP11.41□□□□□ -0.58
KLHL3-204ENST00000504208 IFIT1P09914 478 aaKnown RBP11.41□□□□□ -0.58
KLHL3-204ENST00000504208 CASTP20810 708 aaKnown RBP11.41□□□□□ -0.58
KLHL3-204ENST00000504208 GPTP24298 496 aa11.41□□□□□ -0.58
KLHL3-204ENST00000504208 JAKMIP1Q96N16 626 aaKnown RBP11.41□□□□□ -0.58
KLHL3-204ENST00000504208 DSCC1Q9BVC3 393 aa11.41□□□□□ -0.58
KLHL3-204ENST00000504208 ANKRD31Q8N7Z5 1873 aa11.41□□□□□ -0.58
KLHL3-204ENST00000504208 ITGA6P23229 1130 aa11.4□□□□□ -0.58
KLHL3-204ENST00000504208 AK2P54819 239 aa11.4□□□□□ -0.58
KLHL3-204ENST00000504208 TIMM10P62072 90 aa11.4□□□□□ -0.58
KLHL3-204ENST00000504208 SLC15A2Q16348 729 aa11.4□□□□□ -0.58
KLHL3-204ENST00000504208 KLHL40Q2TBA0 621 aa11.4□□□□□ -0.58
KLHL3-204ENST00000504208 ZMYM1Q5SVZ6 1142 aa11.4□□□□□ -0.58
KLHL3-204ENST00000504208 CHMP4CQ96CF2 233 aa11.4□□□□□ -0.58
KLHL3-204ENST00000504208 UBN2Q6ZU65 1347 aa11.4□□□□□ -0.59
KLHL3-204ENST00000504208 MROH5Q6ZUA9 1318 aa11.4□□□□□ -0.59
KLHL3-204ENST00000504208 WDR33Q9C0J8 1336 aaKnown RBP11.4□□□□□ -0.59
KLHL3-204ENST00000504208 CACNA1SQ13698 1873 aa11.39□□□□□ -0.59
KLHL3-204ENST00000504208 RNF113AO15541 343 aaKnown RBP11.39□□□□□ -0.59
KLHL3-204ENST00000504208 BLOC1S2Q6QNY1 142 aa11.39□□□□□ -0.59
KLHL3-204ENST00000504208 LDHAL6AQ6ZMR3 332 aa11.39□□□□□ -0.59
KLHL3-204ENST00000504208 KLHL34Q8N239 644 aa11.39□□□□□ -0.59
KLHL3-204ENST00000504208 ZNF594Q96JF6 807 aaPredicted RBP11.39□□□□□ -0.59
KLHL3-204ENST00000504208 DNAJC2Q99543 621 aaKnown RBP11.39□□□□□ -0.59
KLHL3-204ENST00000504208 UTP14AQ9BVJ6 771 aaKnown RBP11.39□□□□□ -0.59
KLHL3-204ENST00000504208 PUS3Q9BZE2 481 aaKnown RBP11.39□□□□□ -0.59
KLHL3-204ENST00000504208 BCL2L12Q9HB09 334 aa11.39□□□□□ -0.59
KLHL3-204ENST00000504208 ZDHHC9Q9Y397 364 aa11.39□□□□□ -0.59
KLHL3-204ENST00000504208 FSD2A1L4K1 749 aa11.38□□□□□ -0.59
KLHL3-204ENST00000504208 TTF1Q15361 905 aaPredicted RBP11.38□□□□□ -0.59
KLHL3-204ENST00000504208 TTC39AQ5SRH9 613 aa11.38□□□□□ -0.59
KLHL3-204ENST00000504208 GORABQ5T7V8 394 aa11.38□□□□□ -0.59
KLHL3-204ENST00000504208 ZSCAN25Q6NSZ9 544 aa11.38□□□□□ -0.59
KLHL3-204ENST00000504208 COL23A1Q86Y22 540 aaPredicted RBP11.38□□□□□ -0.59
KLHL3-204ENST00000504208 FLAD1Q8NFF5 587 aa11.38□□□□□ -0.59
KLHL3-204ENST00000504208 XAGE2Q96GT9 111 aa11.38□□□□□ -0.59
KLHL3-204ENST00000504208 NIP7Q9Y221 180 aaKnown RBP eCLIP11.38□□□□□ -0.59
KLHL3-204ENST00000504208 ATP6V1DQ9Y5K8 247 aa11.38□□□□□ -0.59
KLHL3-204ENST00000504208 COL11A2P13942 1736 aaPredicted RBP11.38□□□□□ -0.59
KLHL3-204ENST00000504208 A0A1B0GUL6 1792 aa11.38□□□□□ -0.59
KLHL3-204ENST00000504208 GOLIM4O00461 696 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 PDE8BO95263 885 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 UQCRFS1P1P0C7P4 283 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 GYS1P13807 737 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 PRKCSHP14314 528 aaPredicted RBP11.37□□□□□ -0.59
KLHL3-204ENST00000504208 RPS6KB1P23443 525 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 ADCK5Q3MIX3 580 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 METTL24Q5JXM2 366 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 TBC1D9BQ66K14 1250 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 ZNF589Q86UQ0 364 aaPredicted RBP11.37□□□□□ -0.59
KLHL3-204ENST00000504208 VGLL2Q8N8G2 317 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 GREM2Q9H772 168 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 CTNNA3Q9UI47 895 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 CARMIL3Q8ND23 1372 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 TAF1P21675 1872 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 GOLGA6L3A6NEY3 463 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 ATP2B3Q16720 1220 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 CCDC152Q4G0S7 254 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 BICDL1Q6ZP65 573 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 DDX46Q7L014 1031 aaKnown RBP11.37□□□□□ -0.59
KLHL3-204ENST00000504208 FBXL16Q8N461 479 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 LPIN2Q92539 896 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.37□□□□□ -0.59
KLHL3-204ENST00000504208 CNNM1Q9NRU3 951 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 LMBRD1Q9NUN5 540 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 SMC3Q9UQE7 1217 aa11.37□□□□□ -0.59
KLHL3-204ENST00000504208 MBD3O95983 291 aa11.36□□□□□ -0.59
KLHL3-204ENST00000504208 PDCP20941 246 aa11.36□□□□□ -0.59
KLHL3-204ENST00000504208 PUM3Q15397 648 aaKnown RBP11.36□□□□□ -0.59
KLHL3-204ENST00000504208 SUSD4Q5VX71 490 aa11.36□□□□□ -0.59
KLHL3-204ENST00000504208 EDC3Q96F86 508 aaKnown RBP11.36□□□□□ -0.59
KLHL3-204ENST00000504208 NEK1Q96PY6 1258 aa11.36□□□□□ -0.59
KLHL3-204ENST00000504208 DLEC1Q9Y238 1755 aa11.36□□□□□ -0.59
KLHL3-204ENST00000504208 KIF13BQ9NQT8 1826 aa11.36□□□□□ -0.59
KLHL3-204ENST00000504208 LRP5O75197 1615 aa11.35□□□□□ -0.59
KLHL3-204ENST00000504208 RIC1Q4ADV7 1423 aa11.35□□□□□ -0.59
KLHL3-204ENST00000504208 FAM177BA6PVY3 158 aa11.35□□□□□ -0.59
KLHL3-204ENST00000504208 NTSR2O95665 410 aa11.35□□□□□ -0.59
KLHL3-204ENST00000504208 FGFR2P21802 821 aa11.35□□□□□ -0.59
KLHL3-204ENST00000504208 MRE11P49959 708 aa11.35□□□□□ -0.59
KLHL3-204ENST00000504208 DDX49Q9Y6V7 483 aaKnown RBP11.35□□□□□ -0.59
KLHL3-204ENST00000504208 ARID4AP29374 1257 aaPredicted RBP11.34□□□□□ -0.59
KLHL3-204ENST00000504208 PKP1Q13835 747 aa11.34□□□□□ -0.59
KLHL3-204ENST00000504208 NFIXQ14938 502 aa11.34□□□□□ -0.59
KLHL3-204ENST00000504208 MSL1Q68DK7 614 aa11.34□□□□□ -0.59
KLHL3-204ENST00000504208 MCTP1Q6DN14 999 aa11.34□□□□□ -0.59
KLHL3-204ENST00000504208 APPBP2Q92624 585 aa11.34□□□□□ -0.59
KLHL3-204ENST00000504208 SETDB2Q96T68 719 aa11.34□□□□□ -0.59
KLHL3-204ENST00000504208 ZBTB22O15209 634 aa11.33□□□□□ -0.6
KLHL3-204ENST00000504208 STX6O43752 255 aa11.33□□□□□ -0.6
KLHL3-204ENST00000504208 ZSCAN22P10073 491 aaPredicted RBP11.33□□□□□ -0.6
KLHL3-204ENST00000504208 HSPD1P10809 573 aaKnown RBP11.33□□□□□ -0.6
KLHL3-204ENST00000504208 UBE3CQ15386 1083 aa11.33□□□□□ -0.6
KLHL3-204ENST00000504208 CSPP1Q1MSJ5 1256 aa11.33□□□□□ -0.6
KLHL3-204ENST00000504208 SLC10A5Q5PT55 438 aa11.33□□□□□ -0.6
KLHL3-204ENST00000504208 TMEM87AQ8NBN3 555 aa11.33□□□□□ -0.6
KLHL3-204ENST00000504208 CDC5LQ99459 802 aaKnown RBP11.33□□□□□ -0.6
KLHL3-204ENST00000504208 MPHOSPH8Q99549 860 aa11.33□□□□□ -0.6
KLHL3-204ENST00000504208 AGXT2Q9BYV1 514 aa11.33□□□□□ -0.6
KLHL3-204ENST00000504208 PDGFDQ9GZP0 370 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms