RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 UBASH3AP57075 661 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 CEP135Q66GS9 1140 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 IKBKGQ9Y6K9 419 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 EIF4G3O43432 1585 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 PLCG2P16885 1265 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 PDE1AP54750 535 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 TPTE2Q6XPS3 522 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 MIGA1Q8NAN2 632 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 NCKAP5LQ9HCH0 1330 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 HSF2BPO75031 334 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 ZNF165P49910 485 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 TFCP2Q12800 502 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 KIAA0753Q2KHM9 967 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 TTC16Q8NEE8 873 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 FAM212AQ96EL1 285 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 EYA3Q99504 573 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 SBNO2Q9Y2G9 1366 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 MAP3K9P80192 1104 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 CBX1P83916 185 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 C8orf58Q8NAV2 365 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 DDX12PQ92771 950 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 WWC3Q9ULE0 1092 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 NPATQ14207 1427 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 TRPM2O94759 1503 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 CKAP4Q07065 602 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 NCBP1Q09161 790 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 ANO6Q4KMQ2 910 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 NBPF14Q5TI25 921 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 GIMAP6Q6P9H5 292 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 PLCD3Q8N3E9 789 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 MCM9Q9NXL9 1143 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 RASAL2Q9UJF2 1139 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 FLT4P35916 1363 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 NUP160Q12769 1436 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 UGGT2Q9NYU1 1516 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 ECM2O94769 699 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 CCDC175P0C221 793 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 LMOD1P29536 600 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 MARCKSP29966 332 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 CYLC1P35663 651 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 DPH6Q7L8W6 267 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 NFATC2IPQ8NCF5 419 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 PPP1R14CQ8TAE6 165 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 DHX58Q96C10 678 aa8.17□□□□□ -1.1
SYNPO2-205ENST00000504178 LDHBP07195 334 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 GJC1P36383 396 aa8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 JDP2Q8WYK2 163 aa8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 MRPS27Q92552 414 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 ZRANB1Q9UGI0 708 aa8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 RTL1A6NKG5 1358 aa8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 CEP112Q8N8E3 955 aa8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 BBXQ8WY36 941 aaPredicted RBP8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 PPM1EQ8WY54 764 aa8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 TBC1D32Q96NH3 1257 aa8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 SPAG5Q96R06 1193 aa8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 ZBTB21Q9ULJ3 1066 aa8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 AKR1B10O60218 316 aa8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 ANKRD44Q8N8A2 993 aa8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 SREK1Q8WXA9 508 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 IMPG2Q9BZV3 1241 aa8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 A0A1W2PRG0 241 aa8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 OTUD6BQ8N6M0 293 aa8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 TCEANC2Q96MN5 208 aa8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 SELENOOQ9BVL4 669 aa8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 ZC3H12CQ9C0D7 883 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 ZFYVE9O95405 1425 aa8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 TTC41PQ6P2S7 1318 aa8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 MCM7P33993 719 aa8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 PLVAPQ9BX97 442 aa8.16□□□□□ -1.1
SYNPO2-205ENST00000504178 TNNI2P48788 182 aa8.15□□□□□ -1.1
SYNPO2-205ENST00000504178 GNG11P61952 73 aa8.15□□□□□ -1.1
SYNPO2-205ENST00000504178 USP48Q86UV5 1035 aa8.15□□□□□ -1.1
SYNPO2-205ENST00000504178 CCDC155Q8N6L0 562 aa8.15□□□□□ -1.1
SYNPO2-205ENST00000504178 GIMAP7Q8NHV1 300 aa8.15□□□□□ -1.1
SYNPO2-205ENST00000504178 RBM28Q9NW13 759 aaKnown RBP8.15□□□□□ -1.1
SYNPO2-205ENST00000504178 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.15□□□□□ -1.1
SYNPO2-205ENST00000504178 SAP30BPQ9UHR5 308 aaKnown RBP8.15□□□□□ -1.1
SYNPO2-205ENST00000504178 BICRAQ9NZM4 1560 aa8.15□□□□□ -1.1
SYNPO2-205ENST00000504178 LRSAM1Q6UWE0 723 aa8.15□□□□□ -1.1
SYNPO2-205ENST00000504178 HELBQ8NG08 1087 aaPredicted RBP8.15□□□□□ -1.1
SYNPO2-205ENST00000504178 JAG2Q9Y219 1238 aa8.15□□□□□ -1.1
SYNPO2-205ENST00000504178 PSMA7O14818 248 aa8.15□□□□□ -1.1
SYNPO2-205ENST00000504178 RNMTO43148 476 aaKnown RBP8.15□□□□□ -1.1
SYNPO2-205ENST00000504178 CAVIN2O95810 425 aa8.15□□□□□ -1.1
SYNPO2-205ENST00000504178 HSP90AA4PQ58FG1 418 aa8.15□□□□□ -1.1
SYNPO2-205ENST00000504178 CCDC171Q6TFL3 1326 aa8.15□□□□□ -1.1
SYNPO2-205ENST00000504178 PRPHP41219 470 aa8.15□□□□□ -1.1
SYNPO2-205ENST00000504178 TRAPPC3LQ5T215 181 aa8.15□□□□□ -1.1
SYNPO2-205ENST00000504178 CALML3P27482 149 aa8.15□□□□□ -1.11
SYNPO2-205ENST00000504178 APOBRQ0VD83 1088 aa8.15□□□□□ -1.11
SYNPO2-205ENST00000504178 KRT79Q5XKE5 535 aa8.15□□□□□ -1.11
SYNPO2-205ENST00000504178 GSTA5Q7RTV2 222 aa8.15□□□□□ -1.11
SYNPO2-205ENST00000504178 AOPEPQ8N6M6 819 aa8.15□□□□□ -1.11
SYNPO2-205ENST00000504178 LMTK3Q96Q04 1460 aa8.15□□□□□ -1.11
SYNPO2-205ENST00000504178 GNPATO15228 680 aa8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 F13A1P00488 732 aa8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 PARP1P09874 1014 aaKnown RBP8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 EEF2P13639 858 aaKnown RBP8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 TERF1P54274 439 aa8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 CWF19L2Q2TBE0 894 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms