RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 PDE2AO00408 941 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-208ENST00000504047 CDC27P30260 824 aa5.57□□□□□ -1.52
ATXN3-208ENST00000504047 CABP4P57796 275 aa5.57□□□□□ -1.52
ATXN3-208ENST00000504047 PLCB3Q01970 1234 aa5.57□□□□□ -1.52
ATXN3-208ENST00000504047 ORC1Q13415 861 aa5.57□□□□□ -1.52
ATXN3-208ENST00000504047 MAP4K3Q8IVH8 894 aa5.57□□□□□ -1.52
ATXN3-208ENST00000504047 GALNT12Q8IXK2 581 aa5.57□□□□□ -1.52
ATXN3-208ENST00000504047 FMR1NBQ8N0W7 255 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-208ENST00000504047 TMEM102Q8N9M5 508 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-208ENST00000504047 CSRNP1Q96S65 589 aa5.57□□□□□ -1.52
ATXN3-208ENST00000504047 LACRTQ9GZZ8 138 aa5.57□□□□□ -1.52
ATXN3-208ENST00000504047 ZBTB7CA1YPR0 619 aa5.56□□□□□ -1.52
ATXN3-208ENST00000504047 FAM229AH3BQW9 127 aa5.56□□□□□ -1.52
ATXN3-208ENST00000504047 EIF1AYO14602 144 aaKnown RBP5.56□□□□□ -1.52
ATXN3-208ENST00000504047 POLR3DP05423 398 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-208ENST00000504047 ELNP15502 786 aa5.56□□□□□ -1.52
ATXN3-208ENST00000504047 ASB16Q96NS5 453 aa5.56□□□□□ -1.52
ATXN3-208ENST00000504047 ZKSCAN3Q9BRR0 538 aa5.56□□□□□ -1.52
ATXN3-208ENST00000504047 KRBA1A5PL33 1030 aa5.55□□□□□ -1.52
ATXN3-208ENST00000504047 C9orf172C9J069 976 aa5.55□□□□□ -1.52
ATXN3-208ENST00000504047 IGHA2P01877 340 aa5.55□□□□□ -1.52
ATXN3-208ENST00000504047 ACPPP15309 386 aa5.55□□□□□ -1.52
ATXN3-208ENST00000504047 FBXO11Q86XK2 927 aa5.55□□□□□ -1.52
ATXN3-208ENST00000504047 POP1Q99575 1024 aaKnown RBP5.55□□□□□ -1.52
ATXN3-208ENST00000504047 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-208ENST00000504047 LINC01387J3KSC0 135 aa5.54□□□□□ -1.52
ATXN3-208ENST00000504047 NFKBIEO00221 500 aa5.54□□□□□ -1.52
ATXN3-208ENST00000504047 TREHO43280 583 aa5.54□□□□□ -1.52
ATXN3-208ENST00000504047 GADD45BO75293 160 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-208ENST00000504047 IGHA1P01876 353 aa5.54□□□□□ -1.52
ATXN3-208ENST00000504047 BAG6P46379 1132 aa5.54□□□□□ -1.52
ATXN3-208ENST00000504047 GRIK4Q16099 956 aa5.54□□□□□ -1.52
ATXN3-208ENST00000504047 PLA2G4EQ3MJ16 856 aa5.54□□□□□ -1.52
ATXN3-208ENST00000504047 PEAR1Q5VY43 1037 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-208ENST00000504047 USPL1Q5W0Q7 1092 aa5.54□□□□□ -1.52
ATXN3-208ENST00000504047 ILDR2Q71H61 639 aa5.54□□□□□ -1.52
ATXN3-208ENST00000504047 ASAP3Q8TDY4 903 aa5.54□□□□□ -1.52
ATXN3-208ENST00000504047 BSNDQ8WZ55 320 aa5.54□□□□□ -1.52
ATXN3-208ENST00000504047 NXPE3Q969Y0 559 aa5.54□□□□□ -1.52
ATXN3-208ENST00000504047 CCDC74AQ96AQ1 378 aa5.54□□□□□ -1.52
ATXN3-208ENST00000504047 ADAM19Q9H013 955 aa5.54□□□□□ -1.52
ATXN3-208ENST00000504047 EHD4Q9H223 541 aa5.54□□□□□ -1.52
ATXN3-208ENST00000504047 LIN7BQ9HAP6 207 aa5.54□□□□□ -1.52
ATXN3-208ENST00000504047 NPHS2Q9NP85 383 aa5.54□□□□□ -1.52
ATXN3-208ENST00000504047 NLRP2Q9NX02 1062 aa5.54□□□□□ -1.52
ATXN3-208ENST00000504047 H3BRJ5 948 aa5.53□□□□□ -1.52
ATXN3-208ENST00000504047 TRPA1O75762 1119 aa5.53□□□□□ -1.52
ATXN3-208ENST00000504047 MAPK8P45983 427 aa5.53□□□□□ -1.52
ATXN3-208ENST00000504047 ARL4DP49703 201 aa5.53□□□□□ -1.52
ATXN3-208ENST00000504047 ATP2B2Q01814 1243 aa5.53□□□□□ -1.52
ATXN3-208ENST00000504047 NRG1Q02297 640 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-208ENST00000504047 DSC3Q14574 896 aa5.53□□□□□ -1.52
ATXN3-208ENST00000504047 KIAA0319Q5VV43 1072 aa5.53□□□□□ -1.52
ATXN3-208ENST00000504047 GPAT2Q6NUI2 795 aa5.53□□□□□ -1.52
ATXN3-208ENST00000504047 IGF2-ASQ6U949 168 aa5.53□□□□□ -1.52
ATXN3-208ENST00000504047 BHLHE41Q9C0J9 482 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-208ENST00000504047 GZF1Q9H116 711 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-208ENST00000504047 SH2B1Q9NRF2 756 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-208ENST00000504047 LATS2Q9NRM7 1088 aa5.53□□□□□ -1.52
ATXN3-208ENST00000504047 PPP4R2Q9NY27 417 aa5.53□□□□□ -1.52
ATXN3-208ENST00000504047 USP21Q9UK80 565 aa5.53□□□□□ -1.52
ATXN3-208ENST00000504047 TRAK1Q9UPV9 953 aa5.53□□□□□ -1.52
ATXN3-208ENST00000504047 PNMA6FA0A0J9YX94 578 aa5.52□□□□□ -1.53
ATXN3-208ENST00000504047 A0A1W2PP55 124 aa5.52□□□□□ -1.53
ATXN3-208ENST00000504047 C1QTNF9BB2RNN3 333 aa5.52□□□□□ -1.53
ATXN3-208ENST00000504047 EIF4EBP3O60516 100 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-208ENST00000504047 EPHA1P21709 976 aa5.52□□□□□ -1.53
ATXN3-208ENST00000504047 CDC25BP30305 580 aa5.52□□□□□ -1.53
ATXN3-208ENST00000504047 PIP4K2BP78356 416 aa5.52□□□□□ -1.53
ATXN3-208ENST00000504047 FGD1P98174 961 aa5.52□□□□□ -1.53
ATXN3-208ENST00000504047 SETDB1Q15047 1291 aa5.52□□□□□ -1.53
ATXN3-208ENST00000504047 ENOX2Q16206 610 aaKnown RBP5.52□□□□□ -1.53
ATXN3-208ENST00000504047 KLHL23Q8NBE8 558 aa5.52□□□□□ -1.53
ATXN3-208ENST00000504047 WNT8BQ93098 351 aa5.52□□□□□ -1.53
ATXN3-208ENST00000504047 LENG1Q96BZ8 264 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-208ENST00000504047 HHIPQ96QV1 700 aa5.52□□□□□ -1.53
ATXN3-208ENST00000504047 SEC31BQ9NQW1 1179 aa5.52□□□□□ -1.53
ATXN3-208ENST00000504047 MSTNO14793 375 aa5.51□□□□□ -1.53
ATXN3-208ENST00000504047 FSCN2O14926 492 aa5.51□□□□□ -1.53
ATXN3-208ENST00000504047 DEAF1O75398 565 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-208ENST00000504047 CHRNA4P43681 627 aa5.51□□□□□ -1.53
ATXN3-208ENST00000504047 FMR1Q06787 632 aaKnown RBP eCLIP5.51□□□□□ -1.53
ATXN3-208ENST00000504047 IKBKEQ14164 716 aa5.51□□□□□ -1.53
ATXN3-208ENST00000504047 CCDC27Q2M243 656 aa5.51□□□□□ -1.53
ATXN3-208ENST00000504047 ALG1LQ6GMV1 187 aa5.51□□□□□ -1.53
ATXN3-208ENST00000504047 TXNDC11Q6PKC3 985 aa5.51□□□□□ -1.53
ATXN3-208ENST00000504047 CD163Q86VB7 1156 aa5.51□□□□□ -1.53
ATXN3-208ENST00000504047 CCNJLQ8IV13 435 aa5.51□□□□□ -1.53
ATXN3-208ENST00000504047 FBF1Q8TES7 1133 aa5.51□□□□□ -1.53
ATXN3-208ENST00000504047 MRPL18Q9H0U6 180 aaKnown RBP5.51□□□□□ -1.53
ATXN3-208ENST00000504047 OSGEPQ9NPF4 335 aa5.51□□□□□ -1.53
ATXN3-208ENST00000504047 SOX13Q9UN79 622 aa5.51□□□□□ -1.53
ATXN3-208ENST00000504047 A0A096LPE4 126 aa5.5□□□□□ -1.53
ATXN3-208ENST00000504047 A0A1W2PPZ6 126 aa5.5□□□□□ -1.53
ATXN3-208ENST00000504047 ERCC3P19447 782 aa5.5□□□□□ -1.53
ATXN3-208ENST00000504047 CD68P34810 354 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-208ENST00000504047 GATA4P43694 442 aa5.5□□□□□ -1.53
ATXN3-208ENST00000504047 SLC7A3Q8WY07 619 aa5.5□□□□□ -1.53
ATXN3-208ENST00000504047 ZFYVE1Q9HBF4 777 aa5.5□□□□□ -1.53
ATXN3-208ENST00000504047 ANKRD33BA6NCL7 494 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms