RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 DMTNQ08495 405 aa17.54■□□□□ 0.4
SNF8-203ENST00000504000 DHX8Q14562 1220 aaKnown RBP17.54■□□□□ 0.4
SNF8-203ENST00000504000 DDX46Q7L014 1031 aaKnown RBP17.54■□□□□ 0.4
SNF8-203ENST00000504000 ATG9AQ7Z3C6 839 aa17.54■□□□□ 0.4
SNF8-203ENST00000504000 RBM33Q96EV2 1170 aaKnown RBP17.54■□□□□ 0.4
SNF8-203ENST00000504000 GTPBP4Q9BZE4 634 aaKnown RBP17.54■□□□□ 0.4
SNF8-203ENST00000504000 NAT10Q9H0A0 1025 aaKnown RBP17.54■□□□□ 0.4
SNF8-203ENST00000504000 ZSCAN20P17040 1043 aaPredicted RBP17.54■□□□□ 0.4
SNF8-203ENST00000504000 PKD1L3Q7Z443 1732 aa17.54■□□□□ 0.4
SNF8-203ENST00000504000 MEGF6O75095 1541 aa17.53■□□□□ 0.4
SNF8-203ENST00000504000 E7EWF7 191 aa17.53■□□□□ 0.4
SNF8-203ENST00000504000 HSPD1P10809 573 aaKnown RBP17.53■□□□□ 0.4
SNF8-203ENST00000504000 PDIA3P30101 505 aaKnown RBP17.53■□□□□ 0.4
SNF8-203ENST00000504000 LRRFIP1Q32MZ4 808 aaKnown RBP17.53■□□□□ 0.4
SNF8-203ENST00000504000 CCDC144BQ3MJ40 725 aa17.53■□□□□ 0.4
SNF8-203ENST00000504000 ADALQ6DHV7 355 aa17.53■□□□□ 0.4
SNF8-203ENST00000504000 LMBR1LQ6UX01 489 aa17.53■□□□□ 0.4
SNF8-203ENST00000504000 CCDC144CPQ8IYA2 1237 aa17.53■□□□□ 0.4
SNF8-203ENST00000504000 USP28Q96RU2 1077 aa17.53■□□□□ 0.4
SNF8-203ENST00000504000 BPIFA3Q9BQP9 254 aa17.53■□□□□ 0.4
SNF8-203ENST00000504000 RTEL1Q9NZ71 1219 aa17.53■□□□□ 0.4
SNF8-203ENST00000504000 C1orf167Q5SNV9 1468 aa17.53■□□□□ 0.4
SNF8-203ENST00000504000 CIAO1O76071 339 aa17.52■□□□□ 0.4
SNF8-203ENST00000504000 NCBP1Q09161 790 aaKnown RBP17.52■□□□□ 0.4
SNF8-203ENST00000504000 C11orf57Q6ZUT1 292 aaPredicted RBP17.52■□□□□ 0.4
SNF8-203ENST00000504000 GLI3P10071 1580 aa17.52■□□□□ 0.4
SNF8-203ENST00000504000 PARP4Q9UKK3 1724 aaKnown RBP17.52■□□□□ 0.4
SNF8-203ENST00000504000 COL18A1P39060 1754 aa17.52■□□□□ 0.4
SNF8-203ENST00000504000 BECN2A8MW95 431 aa17.52■□□□□ 0.39
SNF8-203ENST00000504000 GSDMDP57764 484 aa17.52■□□□□ 0.39
SNF8-203ENST00000504000 APOBRQ0VD83 1088 aa17.52■□□□□ 0.39
SNF8-203ENST00000504000 LMOD2Q6P5Q4 547 aa17.52■□□□□ 0.39
SNF8-203ENST00000504000 DHX40Q8IX18 779 aaKnown RBP17.52■□□□□ 0.39
SNF8-203ENST00000504000 CEP57L1Q8IYX8 460 aa17.52■□□□□ 0.39
SNF8-203ENST00000504000 CCDC112Q8NEF3 446 aa17.52■□□□□ 0.39
SNF8-203ENST00000504000 C16orf45Q96MC5 204 aaPredicted RBP17.52■□□□□ 0.39
SNF8-203ENST00000504000 GOLPH3LQ9H4A5 285 aa17.52■□□□□ 0.39
SNF8-203ENST00000504000 NLRP2Q9NX02 1062 aa17.52■□□□□ 0.39
SNF8-203ENST00000504000 IMPACTQ9P2X3 320 aa17.52■□□□□ 0.39
SNF8-203ENST00000504000 CARMIL3Q8ND23 1372 aa17.51■□□□□ 0.39
SNF8-203ENST00000504000 RNF113AO15541 343 aaKnown RBP17.51■□□□□ 0.39
SNF8-203ENST00000504000 TPD52L1Q16890 204 aaPredicted RBP17.51■□□□□ 0.39
SNF8-203ENST00000504000 NYAP1Q6ZVC0 841 aa17.51■□□□□ 0.39
SNF8-203ENST00000504000 FMR1NBQ8N0W7 255 aaPredicted RBP17.51■□□□□ 0.39
SNF8-203ENST00000504000 FBXO3Q9UK99 471 aa17.51■□□□□ 0.39
SNF8-203ENST00000504000 KIF2AO00139 706 aaPredicted RBP17.5■□□□□ 0.39
SNF8-203ENST00000504000 GOLIM4O00461 696 aa17.5■□□□□ 0.39
SNF8-203ENST00000504000 ATP2B3Q16720 1220 aa17.5■□□□□ 0.39
SNF8-203ENST00000504000 MRPS27Q92552 414 aaKnown RBP17.5■□□□□ 0.39
SNF8-203ENST00000504000 LRRC2Q9BYS8 371 aa17.5■□□□□ 0.39
SNF8-203ENST00000504000 CGNQ9P2M7 1197 aaKnown RBP17.5■□□□□ 0.39
SNF8-203ENST00000504000 CTNNA3Q9UI47 895 aa17.5■□□□□ 0.39
SNF8-203ENST00000504000 NDUFB9Q9Y6M9 179 aa17.5■□□□□ 0.39
SNF8-203ENST00000504000 CYP27B1O15528 508 aa17.5■□□□□ 0.39
SNF8-203ENST00000504000 DHX16O60231 1041 aaKnown RBP17.5■□□□□ 0.39
SNF8-203ENST00000504000 CHGBP05060 677 aa17.5■□□□□ 0.39
SNF8-203ENST00000504000 ILDR1Q86SU0 546 aaPredicted RBP17.5■□□□□ 0.39
SNF8-203ENST00000504000 OSBPL5Q9H0X9 879 aaPredicted RBP17.5■□□□□ 0.39
SNF8-203ENST00000504000 POLR3EQ9NVU0 708 aa17.5■□□□□ 0.39
SNF8-203ENST00000504000 CWC25Q9NXE8 425 aaPredicted RBP17.5■□□□□ 0.39
SNF8-203ENST00000504000 MAST3O60307 1309 aa17.49■□□□□ 0.39
SNF8-203ENST00000504000 WDR19Q8NEZ3 1342 aa17.49■□□□□ 0.39
SNF8-203ENST00000504000 ATP5J2-PTCD1G3V325 749 aa17.49■□□□□ 0.39
SNF8-203ENST00000504000 EYA2O00167 538 aa17.49■□□□□ 0.39
SNF8-203ENST00000504000 PTCD1O75127 700 aaKnown RBP17.49■□□□□ 0.39
SNF8-203ENST00000504000 YEATS4O95619 227 aa17.49■□□□□ 0.39
SNF8-203ENST00000504000 KCNJ6P48051 423 aa17.49■□□□□ 0.39
SNF8-203ENST00000504000 CEP135Q66GS9 1140 aa17.49■□□□□ 0.39
SNF8-203ENST00000504000 FSIP1Q8NA03 581 aa17.49■□□□□ 0.39
SNF8-203ENST00000504000 CCDC191Q8NCU4 936 aa17.49■□□□□ 0.39
SNF8-203ENST00000504000 KCNG4Q8TDN1 519 aa17.49■□□□□ 0.39
SNF8-203ENST00000504000 ABCC12Q96J65 1359 aa17.49■□□□□ 0.39
SNF8-203ENST00000504000 FAM177BA6PVY3 158 aa17.48■□□□□ 0.39
SNF8-203ENST00000504000 ZFYP08048 801 aaPredicted RBP17.48■□□□□ 0.39
SNF8-203ENST00000504000 ME1P48163 572 aa17.48■□□□□ 0.39
SNF8-203ENST00000504000 CEBPZQ03701 1054 aaKnown RBP17.48■□□□□ 0.39
SNF8-203ENST00000504000 BRAPQ7Z569 592 aa17.48■□□□□ 0.39
SNF8-203ENST00000504000 OGFRQ9NZT2 677 aa17.48■□□□□ 0.39
SNF8-203ENST00000504000 TUBB4AP04350 444 aa17.48■□□□□ 0.39
SNF8-203ENST00000504000 IFIT1P09914 478 aaKnown RBP17.48■□□□□ 0.39
SNF8-203ENST00000504000 SKILP12757 684 aa17.48■□□□□ 0.39
SNF8-203ENST00000504000 FDPSP14324 419 aaKnown RBP17.48■□□□□ 0.39
SNF8-203ENST00000504000 ZC3H6P61129 1189 aaKnown RBP17.48■□□□□ 0.39
SNF8-203ENST00000504000 CCZ1BP86790 482 aa17.48■□□□□ 0.39
SNF8-203ENST00000504000 CCZ1P86791 482 aaPredicted RBP17.48■□□□□ 0.39
SNF8-203ENST00000504000 LINC00301Q8NCQ3 95 aa17.48■□□□□ 0.39
SNF8-203ENST00000504000 NEUROD6Q96NK8 337 aa17.48■□□□□ 0.39
SNF8-203ENST00000504000 C19orf44Q9H6X5 657 aa17.48■□□□□ 0.39
SNF8-203ENST00000504000 PCDHA7Q9UN72 937 aa17.48■□□□□ 0.39
SNF8-203ENST00000504000 NUP188Q5SRE5 1749 aa17.47■□□□□ 0.39
SNF8-203ENST00000504000 ADAMTSL3P82987 1691 aa17.47■□□□□ 0.39
SNF8-203ENST00000504000 CABP4P57796 275 aa17.47■□□□□ 0.39
SNF8-203ENST00000504000 CCT2P78371 535 aaKnown RBP17.47■□□□□ 0.39
SNF8-203ENST00000504000 CBX1P83916 185 aa17.47■□□□□ 0.39
SNF8-203ENST00000504000 PTPN14Q15678 1187 aa17.47■□□□□ 0.39
SNF8-203ENST00000504000 CCDC69A6NI79 296 aa17.46■□□□□ 0.39
SNF8-203ENST00000504000 ARID3AQ99856 593 aa17.46■□□□□ 0.39
SNF8-203ENST00000504000 FTOQ9C0B1 505 aaKnown RBP eCLIP17.46■□□□□ 0.39
SNF8-203ENST00000504000 KIAA1468Q9P260 1216 aa17.46■□□□□ 0.39
SNF8-203ENST00000504000 TJP1Q07157 1748 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms